Aspergillus aculeatus (strain ATCC 16872 / CBS 172.66 / WB 5094)
Average proteome isoelectric point is 6.35
Get precalculated fractions of proteins
Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
All
Note: above files contain also dissociation constants (pKa)
Virtual 2D-PAGE plot for 10842 proteins (isoelectric point calculated using IPC2_protein)
Get csv file with sequences according to given criteria:
* You can choose from 21 different methods for calculating isoelectric point
Summary statistics related to proteome-wise predictions
Protein with the lowest isoelectric point:
>tr|A0A1L9X954|A0A1L9X954_ASPA1 GMC_OxRdtase_N domain-containing protein OS=Aspergillus aculeatus (strain ATCC 16872 / CBS 172.66 / WB 5094) OX=690307 GN=ASPACDRAFT_74505 PE=3 SV=1
MM1 pKa = 7.43 QIAHH5 pKa = 7.53 LLALSGLMLATTVTAGGDD23 pKa = 3.53 LDD25 pKa = 5.59 RR26 pKa = 11.84 NDD28 pKa = 3.84 VPNTCWEE35 pKa = 3.9 PCGPVVNISHH45 pKa = 6.96 ACDD48 pKa = 3.18 AQTDD52 pKa = 3.63 NDD54 pKa = 4.2 RR55 pKa = 11.84 AEE57 pKa = 4.17 LQCVCGWDD65 pKa = 3.47 RR66 pKa = 11.84 AATLIPLCEE75 pKa = 3.86 ACIGYY80 pKa = 9.77 YY81 pKa = 8.64 RR82 pKa = 11.84 TQQHH86 pKa = 6.89 HH87 pKa = 7.06 DD88 pKa = 3.62 HH89 pKa = 7.13 DD90 pKa = 5.77 HH91 pKa = 7.79 DD92 pKa = 6.21 DD93 pKa = 4.99 DD94 pKa = 5.59 HH95 pKa = 9.08 DD96 pKa = 4.49 HH97 pKa = 7.92 DD98 pKa = 5.15 NDD100 pKa = 4.78 NDD102 pKa = 4.87 DD103 pKa = 6.17 DD104 pKa = 6.9 DD105 pKa = 7.55 DD106 pKa = 7.68 DD107 pKa = 7.61 DD108 pKa = 7.65 DD109 pKa = 7.65 DD110 pKa = 7.65 DD111 pKa = 7.65 DD112 pKa = 7.65 DD113 pKa = 7.69 DD114 pKa = 7.65 DD115 pKa = 7.64 DD116 pKa = 7.38 DD117 pKa = 6.7 DD118 pKa = 7.16 DD119 pKa = 6.4 NDD121 pKa = 3.79 RR122 pKa = 11.84 HH123 pKa = 6.82 DD124 pKa = 3.99 NNAYY128 pKa = 10.3 DD129 pKa = 4.15 ILTSCSFSTTTWNPAAATSVLSAVHH154 pKa = 7.12 ASTTGNGNATASTSASATGAGAAGTTTAAAGTGGGRR190 pKa = 11.84 DD191 pKa = 3.43 SVSTTDD197 pKa = 3.48 GSSGATGRR205 pKa = 11.84 ADD207 pKa = 3.1 SGTATGAVSAEE218 pKa = 4.09 GTRR221 pKa = 11.84 VTDD224 pKa = 3.38 NAAPGLVAGRR234 pKa = 11.84 EE235 pKa = 4.12 AASFAAVVGVGVLALLL251 pKa = 4.28
Molecular weight: 25.53 kDa
Isoelectric point according different methods:
IPC2.protein.svr19 3.662
IPC2_protein 3.732
IPC_protein 3.783
Toseland 3.541
ProMoST 3.986
Dawson 3.808
Bjellqvist 3.961
Wikipedia 3.795
Rodwell 3.605
Grimsley 3.439
Solomon 3.808
Lehninger 3.757
Nozaki 3.923
DTASelect 4.266
Thurlkill 3.605
EMBOSS 3.795
Sillero 3.923
Patrickios 1.278
IPC_peptide 3.795
IPC2_peptide 3.884
IPC2.peptide.svr19 3.807
Protein with the highest isoelectric point:
>tr|A0A1L9WPT2|A0A1L9WPT2_ASPA1 Carboxylic ester hydrolase OS=Aspergillus aculeatus (strain ATCC 16872 / CBS 172.66 / WB 5094) OX=690307 GN=ASPACDRAFT_1904121 PE=3 SV=1
MM1 pKa = 6.58 THH3 pKa = 6.26 EE4 pKa = 4.66 SVWYY8 pKa = 9.72 SRR10 pKa = 11.84 PRR12 pKa = 11.84 QFGKK16 pKa = 10.48 GSRR19 pKa = 11.84 GCRR22 pKa = 11.84 VCTHH26 pKa = 6.9 RR27 pKa = 11.84 AGLIRR32 pKa = 11.84 KK33 pKa = 8.95 YY34 pKa = 11.19 GMNICRR40 pKa = 11.84 QCFRR44 pKa = 11.84 EE45 pKa = 4.08 KK46 pKa = 10.78 ASDD49 pKa = 2.76 IGFYY53 pKa = 10.54 KK54 pKa = 10.53 FRR56 pKa = 5.74
Molecular weight: 6.68 kDa
Isoelectric point according different methods:
IPC2.protein.svr19 9.353
IPC2_protein 9.692
IPC_protein 10.452
Toseland 10.496
ProMoST 10.511
Dawson 10.643
Bjellqvist 10.379
Wikipedia 10.847
Rodwell 10.862
Grimsley 10.701
Solomon 10.73
Lehninger 10.687
Nozaki 10.54
DTASelect 10.35
Thurlkill 10.526
EMBOSS 10.891
Sillero 10.584
Patrickios 10.643
IPC_peptide 10.73
IPC2_peptide 9.721
IPC2.peptide.svr19 8.49
Peptides (in silico digests for buttom-up proteomics)
Below you can find
in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.
Try ESI
ChTry ESI
ArgC ESI
LysN ESI
TryLysC ESI
Try MALDI
ChTry MALDI
ArgC MALDI
LysN MALDI
TryLysC MALDI
Try LTQ
ChTry LTQ
ArgC LTQ
LysN LTQ
TryLysC LTQ
Try MSlow
ChTry MSlow
ArgC MSlow
LysN MSlow
TryLysC MSlow
Try MShigh
ChTry MShigh
ArgC MShigh
LysN MShigh
TryLysC MShigh
General Statistics
Number of major isoforms
Number of additional isoforms
Number of all proteins
Number of amino acids
Min. Seq. Length
Max. Seq. Length
Avg. Seq. Length
Avg. Mol. Weight
10842
0
10842
5397569
49
7329
497.8
55.02
Amino acid frequency
Ala
Cys
Asp
Glu
Phe
Gly
His
Ile
Lys
Leu
8.998 ± 0.02
1.266 ± 0.009
5.533 ± 0.015
6.076 ± 0.024
3.682 ± 0.014
6.857 ± 0.022
2.518 ± 0.012
4.76 ± 0.015
4.177 ± 0.019
9.283 ± 0.027
Met
Asn
Gln
Pro
Arg
Ser
Thr
Val
Trp
Tyr
2.092 ± 0.008
3.42 ± 0.012
6.037 ± 0.023
4.113 ± 0.016
6.248 ± 0.022
8.128 ± 0.03
6.143 ± 0.017
6.313 ± 0.017
1.506 ± 0.009
2.851 ± 0.013
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level
Most of the basic statistics you can see at this page can be downloaded from this CSV file
For dipeptide frequency statistics click here