Arsenicitalea aurantiaca

Taxonomy: cellular organisms; Bacteria; Proteobacteria; Alphaproteobacteria; Hyphomicrobiales; Devosiaceae; Arsenicitalea

Average proteome isoelectric point is 6.27

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 3476 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A433XF31|A0A433XF31_9RHIZ Outer membrane protein assembly factor BamA OS=Arsenicitalea aurantiaca OX=1783274 GN=bamA PE=3 SV=1
MM1 pKa = 7.8KK2 pKa = 9.48LTTKK6 pKa = 10.79LLAASAASVLMTASAFAADD25 pKa = 4.86LYY27 pKa = 11.62VPIEE31 pKa = 4.0QPYY34 pKa = 8.33VPEE37 pKa = 4.08VAAAAPLGWTGAYY50 pKa = 9.87VGVHH54 pKa = 6.5AGYY57 pKa = 10.61GWGQFDD63 pKa = 5.15LAGDD67 pKa = 4.06DD68 pKa = 3.46EE69 pKa = 5.16TTFFTPGDD77 pKa = 3.75SDD79 pKa = 3.67VDD81 pKa = 3.24GWLAGVQAGYY91 pKa = 10.38NVNLDD96 pKa = 3.64GVVLGIEE103 pKa = 4.73GDD105 pKa = 3.88IAWADD110 pKa = 3.79LNGSATIGTGDD121 pKa = 3.89DD122 pKa = 3.46AVTVSSNIDD131 pKa = 3.25WIGTIRR137 pKa = 11.84GRR139 pKa = 11.84VGFAADD145 pKa = 3.47AFLLYY150 pKa = 9.07GTAGVAFAGASMDD163 pKa = 3.78VAALEE168 pKa = 4.12PTEE171 pKa = 5.26AFSDD175 pKa = 4.3DD176 pKa = 3.7NVHH179 pKa = 6.07TGWVVGAGVEE189 pKa = 4.53TMVTDD194 pKa = 4.86NISLKK199 pKa = 10.85AEE201 pKa = 4.0YY202 pKa = 9.88LYY204 pKa = 10.87HH205 pKa = 7.72DD206 pKa = 5.23FGNEE210 pKa = 3.71TFSFDD215 pKa = 3.96DD216 pKa = 3.85TNATDD221 pKa = 4.0ASFNVQTAKK230 pKa = 10.41IGLNFHH236 pKa = 7.0FF237 pKa = 5.42

Molecular weight: 24.68 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A433XF98|A0A433XF98_9RHIZ SMP-30/gluconolactonase/LRE family protein OS=Arsenicitalea aurantiaca OX=1783274 GN=EMQ25_06245 PE=4 SV=1
MM1 pKa = 7.77RR2 pKa = 11.84RR3 pKa = 11.84RR4 pKa = 11.84AQKK7 pKa = 9.89SPPRR11 pKa = 11.84AAHH14 pKa = 5.98HH15 pKa = 6.12RR16 pKa = 11.84RR17 pKa = 11.84GVRR20 pKa = 11.84PKK22 pKa = 10.18PKK24 pKa = 9.74RR25 pKa = 11.84APPLPRR31 pKa = 11.84TLPRR35 pKa = 11.84LRR37 pKa = 11.84RR38 pKa = 11.84AFARR42 pKa = 11.84WRR44 pKa = 11.84QSGMRR49 pKa = 11.84QRR51 pKa = 11.84HH52 pKa = 5.03PPWRR56 pKa = 11.84GTPPAQRR63 pKa = 11.84QRR65 pKa = 11.84GG66 pKa = 3.6

Molecular weight: 7.91 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

3476

0

3476

1110746

20

3988

319.5

34.52

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

12.891 ± 0.059

0.694 ± 0.012

5.515 ± 0.039

6.08 ± 0.04

3.769 ± 0.03

8.967 ± 0.043

1.976 ± 0.019

5.474 ± 0.029

2.333 ± 0.029

10.499 ± 0.048

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.489 ± 0.02

2.439 ± 0.021

5.307 ± 0.033

2.885 ± 0.023

7.34 ± 0.041

5.188 ± 0.028

5.319 ± 0.026

7.439 ± 0.037

1.256 ± 0.017

2.137 ± 0.022
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski