Wenzhouxiangella sp. 15181

Taxonomy: cellular organisms; Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Wenzhouxiangellaceae; Wenzhouxiangella; unclassified Wenzhouxiangella

Average proteome isoelectric point is 5.91

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2733 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A372C136|A0A372C136_9GAMM Protein-L-isoaspartate O-methyltransferase OS=Wenzhouxiangella sp. 15181 OX=2301224 GN=pcm PE=3 SV=1
MM1 pKa = 8.08DD2 pKa = 4.97FNLMPLSLVISGLLVGNAAMAQNNLVIQPPAGGSVVVEE40 pKa = 4.15DD41 pKa = 3.56AAGNKK46 pKa = 9.14VLLHH50 pKa = 6.4IDD52 pKa = 3.64EE53 pKa = 5.02NGVLQLPGVAGSAQQATILCIDD75 pKa = 4.21GASGQLGPCSAGTIAGLEE93 pKa = 4.34GPIGPTGPTGARR105 pKa = 11.84GPEE108 pKa = 4.21GLQGPKK114 pKa = 10.31GSPGDD119 pKa = 3.67IGPTGPMGIQGDD131 pKa = 4.13VGPTGAMGSPGPTGPMGPTGAAGVYY156 pKa = 9.6TIGTGLEE163 pKa = 4.26LNGDD167 pKa = 4.22TLSLPTNCMDD177 pKa = 5.18GAQLTWNATAASWDD191 pKa = 4.14CPPVGPTGPTGPTGSTGG208 pKa = 3.06

Molecular weight: 19.9 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A372BU04|A0A372BU04_9GAMM Uncharacterized protein OS=Wenzhouxiangella sp. 15181 OX=2301224 GN=DZK25_11095 PE=4 SV=1
MM1 pKa = 7.45KK2 pKa = 9.56RR3 pKa = 11.84TFQPSRR9 pKa = 11.84IKK11 pKa = 10.39RR12 pKa = 11.84LRR14 pKa = 11.84RR15 pKa = 11.84HH16 pKa = 5.73GFRR19 pKa = 11.84ARR21 pKa = 11.84MASKK25 pKa = 10.28SGRR28 pKa = 11.84AIINARR34 pKa = 11.84RR35 pKa = 11.84AKK37 pKa = 9.63GRR39 pKa = 11.84KK40 pKa = 8.96RR41 pKa = 11.84LGANPGRR48 pKa = 4.09

Molecular weight: 5.57 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2733

0

2733

936914

22

2821

342.8

37.75

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

10.651 ± 0.05

0.845 ± 0.013

6.391 ± 0.043

7.276 ± 0.054

3.575 ± 0.029

8.386 ± 0.046

2.313 ± 0.024

4.887 ± 0.033

2.467 ± 0.04

10.671 ± 0.057

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.32 ± 0.022

2.609 ± 0.024

4.919 ± 0.033

3.392 ± 0.026

7.851 ± 0.045

5.598 ± 0.039

4.748 ± 0.029

7.297 ± 0.035

1.586 ± 0.022

2.218 ± 0.023
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski