Aspergillus leporis
Average proteome isoelectric point is 6.56
Get precalculated fractions of proteins
Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
All
Note: above files contain also dissociation constants (pKa)
Virtual 2D-PAGE plot for 12743 proteins (isoelectric point calculated using IPC2_protein)
Get csv file with sequences according to given criteria:
* You can choose from 21 different methods for calculating isoelectric point
Summary statistics related to proteome-wise predictions
Protein with the lowest isoelectric point:
>tr|A0A5N5WSY2|A0A5N5WSY2_9EURO S-adenosyl-L-methionine-dependent methyltransferase OS=Aspergillus leporis OX=41062 GN=BDV29DRAFT_197223 PE=4 SV=1
MM1 pKa = 7.42 KK2 pKa = 9.96 PSTFLSSLALIGPTALTAAQTLNIVAHH29 pKa = 6.25 QDD31 pKa = 3.29 DD32 pKa = 6.1 DD33 pKa = 3.87 ILFISPEE40 pKa = 3.72 ILSDD44 pKa = 3.61 VRR46 pKa = 11.84 SGRR49 pKa = 11.84 AVRR52 pKa = 11.84 TIFLTAGDD60 pKa = 4.18 AGNGEE65 pKa = 4.84 AYY67 pKa = 6.59 WTSRR71 pKa = 11.84 QAGSLAAYY79 pKa = 10.28 AEE81 pKa = 4.13 ILGVSNEE88 pKa = 3.9 WDD90 pKa = 3.31 EE91 pKa = 4.31 GDD93 pKa = 3.84 AGIEE97 pKa = 4.13 GFDD100 pKa = 3.28 IPVYY104 pKa = 10.57 SLSAQPQVEE113 pKa = 4.37 LAFLHH118 pKa = 6.8 LPDD121 pKa = 5.32 GNMDD125 pKa = 3.6 GQGFPATGGVSLRR138 pKa = 11.84 QLWEE142 pKa = 3.8 GDD144 pKa = 3.34 IEE146 pKa = 4.74 SLGTVDD152 pKa = 5.9 ASGTTYY158 pKa = 10.72 TKK160 pKa = 11.06 DD161 pKa = 3.23 EE162 pKa = 5.39 LIDD165 pKa = 3.61 VLADD169 pKa = 3.45 IIEE172 pKa = 4.35 NFEE175 pKa = 4.15 PDD177 pKa = 4.0 RR178 pKa = 11.84 INTLDD183 pKa = 3.58 YY184 pKa = 11.65 VNDD187 pKa = 3.86 IGDD190 pKa = 4.15 GDD192 pKa = 4.26 HH193 pKa = 7.15 SDD195 pKa = 4.1 HH196 pKa = 6.18 YY197 pKa = 8.08 TTGYY201 pKa = 8.16 FTDD204 pKa = 4.01 HH205 pKa = 7.27 ASQEE209 pKa = 4.08 ADD211 pKa = 2.92 NDD213 pKa = 3.93 ADD215 pKa = 3.84 LVGYY219 pKa = 8.69 MGYY222 pKa = 10.7 GINNLPVNLDD232 pKa = 3.35 ANTIADD238 pKa = 4.29 KK239 pKa = 11.41 KK240 pKa = 10.79 NIFYY244 pKa = 9.76 TYY246 pKa = 10.15 AAHH249 pKa = 8.11 DD250 pKa = 3.95 SATCQNDD257 pKa = 3.38 AACASRR263 pKa = 11.84 PEE265 pKa = 4.23 INWLQRR271 pKa = 11.84 QYY273 pKa = 10.84 TVV275 pKa = 2.86
Molecular weight: 29.71 kDa
Isoelectric point according different methods:
IPC2.protein.svr19 3.707
IPC2_protein 3.872
IPC_protein 3.884
Toseland 3.668
ProMoST 4.05
Dawson 3.884
Bjellqvist 4.037
Wikipedia 3.821
Rodwell 3.706
Grimsley 3.567
Solomon 3.884
Lehninger 3.834
Nozaki 3.999
DTASelect 4.253
Thurlkill 3.719
EMBOSS 3.834
Sillero 4.012
Patrickios 1.252
IPC_peptide 3.872
IPC2_peptide 3.986
IPC2.peptide.svr19 3.893
Protein with the highest isoelectric point:
>tr|A0A5N5WKX7|A0A5N5WKX7_9EURO Amine oxidase OS=Aspergillus leporis OX=41062 GN=BDV29DRAFT_199969 PE=3 SV=1
MM1 pKa = 7.64 LLLLDD6 pKa = 4.33 LQRR9 pKa = 11.84 QNPHH13 pKa = 5.57 QPPTKK18 pKa = 9.13 TRR20 pKa = 11.84 KK21 pKa = 9.85 LNGTAAHH28 pKa = 6.6 FSPFRR33 pKa = 11.84 TLSRR37 pKa = 11.84 SLCLFFFSPALSSFYY52 pKa = 10.95 YY53 pKa = 10.52 SVFPLPTQTPPPSRR67 pKa = 11.84 PNLSPLRR74 pKa = 11.84 PIRR77 pKa = 11.84 HH78 pKa = 5.6 PFIRR82 pKa = 11.84 CLWMRR87 pKa = 11.84 ASSDD91 pKa = 3.58 FHH93 pKa = 7.23 SLPIQFLFSLNLTTQEE109 pKa = 3.5 KK110 pKa = 10.77 SIIKK114 pKa = 9.77 KK115 pKa = 8.87 RR116 pKa = 11.84 QHH118 pKa = 5.8 FKK120 pKa = 10.72 KK121 pKa = 9.2 EE122 pKa = 3.64 KK123 pKa = 7.83 PGIYY127 pKa = 10.03 FFFSFFFSHH136 pKa = 7.65 LILFSNFLRR145 pKa = 11.84 SCFFFFSLLPFHH157 pKa = 7.01 RR158 pKa = 11.84 SIYY161 pKa = 10.55 RR162 pKa = 11.84 LVCLNKK168 pKa = 10.21 GSVPGRR174 pKa = 11.84 GPEE177 pKa = 4.17 SVNPLGGCTEE187 pKa = 3.74 ILRR190 pKa = 11.84 RR191 pKa = 11.84 IRR193 pKa = 11.84 FSWVLRR199 pKa = 11.84 LLYY202 pKa = 10.54 APSLLHH208 pKa = 6.42 LSCMICCSILLFFPPPPDD226 pKa = 3.11
Molecular weight: 26.34 kDa
Isoelectric point according different methods:
IPC2.protein.svr19 9.352
IPC2_protein 9.721
IPC_protein 10.511
Toseland 10.672
ProMoST 10.365
Dawson 10.774
Bjellqvist 10.511
Wikipedia 10.979
Rodwell 11.008
Grimsley 10.833
Solomon 10.877
Lehninger 10.847
Nozaki 10.701
DTASelect 10.482
Thurlkill 10.672
EMBOSS 11.067
Sillero 10.716
Patrickios 10.716
IPC_peptide 10.891
IPC2_peptide 9.838
IPC2.peptide.svr19 8.452
Peptides (in silico digests for buttom-up proteomics)
Below you can find
in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.
Try ESI
ChTry ESI
ArgC ESI
LysN ESI
TryLysC ESI
Try MALDI
ChTry MALDI
ArgC MALDI
LysN MALDI
TryLysC MALDI
Try LTQ
ChTry LTQ
ArgC LTQ
LysN LTQ
TryLysC LTQ
Try MSlow
ChTry MSlow
ArgC MSlow
LysN MSlow
TryLysC MSlow
Try MShigh
ChTry MShigh
ArgC MShigh
LysN MShigh
TryLysC MShigh
General Statistics
Number of major isoforms
Number of additional isoforms
Number of all proteins
Number of amino acids
Min. Seq. Length
Max. Seq. Length
Avg. Seq. Length
Avg. Mol. Weight
12743
0
12743
5742925
49
6910
450.7
50.0
Amino acid frequency
Ala
Cys
Asp
Glu
Phe
Gly
His
Ile
Lys
Leu
8.199 ± 0.018
1.341 ± 0.008
5.488 ± 0.014
5.996 ± 0.02
3.877 ± 0.013
6.808 ± 0.02
2.459 ± 0.009
5.153 ± 0.014
4.633 ± 0.02
9.246 ± 0.022
Met
Asn
Gln
Pro
Arg
Ser
Thr
Val
Trp
Tyr
2.174 ± 0.007
3.731 ± 0.01
5.877 ± 0.021
3.987 ± 0.014
6.04 ± 0.018
8.354 ± 0.022
5.943 ± 0.011
6.242 ± 0.016
1.51 ± 0.008
2.942 ± 0.012
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level
Most of the basic statistics you can see at this page can be downloaded from this CSV file
For dipeptide frequency statistics click here