Oryctes borbonicus

Taxonomy: cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Protostomia; Ecdysozoa; Panarthropoda; Arthropoda; Mandibulata; Pancrustacea; Hexapoda; Insecta; Dicondylia; Pterygota; Neoptera; Endopterygota; Coleoptera; Polyphaga; Scarabaeiformia; Scarabaeoidea; Scarabaeidae; Dynastinae;

Average proteome isoelectric point is 6.68

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 8820 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A0T6BA91|A0A0T6BA91_9SCAR Uncharacterized protein (Fragment) OS=Oryctes borbonicus OX=1629725 GN=AMK59_1340 PE=4 SV=1
VV1 pKa = 5.79EE2 pKa = 4.18TADD5 pKa = 3.7SLRR8 pKa = 11.84ATWEE12 pKa = 3.85APLNSEE18 pKa = 4.31EE19 pKa = 4.78CGVAYY24 pKa = 9.52EE25 pKa = 4.24VIYY28 pKa = 10.69EE29 pKa = 3.92NEE31 pKa = 4.06ILGSSAVEE39 pKa = 4.25VVGLAHH45 pKa = 7.27DD46 pKa = 4.39FNIEE50 pKa = 4.77LIPCTDD56 pKa = 3.31YY57 pKa = 11.24TITVTPISFTGSKK70 pKa = 8.31GTPVSQEE77 pKa = 3.63VTPSIRR83 pKa = 11.84VGSVNDD89 pKa = 4.93LIAADD94 pKa = 3.82VGDD97 pKa = 4.24SVVLSWSTATVGVCPLVYY115 pKa = 9.9IVNYY119 pKa = 9.96AVNDD123 pKa = 3.7VQGEE127 pKa = 4.14EE128 pKa = 4.52LEE130 pKa = 4.4TTEE133 pKa = 5.14VSVTFNRR140 pKa = 11.84IPCSDD145 pKa = 3.37SQFSVKK151 pKa = 10.13VLSEE155 pKa = 4.55GIVGPVAVANLEE167 pKa = 4.29LGSADD172 pKa = 3.35INSITQVEE180 pKa = 4.55GLNLDD185 pKa = 3.61GTILSWSPPVTVGLCEE201 pKa = 3.3IVYY204 pKa = 10.32IVDD207 pKa = 3.34IEE209 pKa = 4.46NTFGLQQTATRR220 pKa = 11.84DD221 pKa = 3.46LSIDD225 pKa = 3.99LEE227 pKa = 4.86LIPCSRR233 pKa = 11.84NLFVVRR239 pKa = 11.84GSANGITGEE248 pKa = 3.89PATIEE253 pKa = 4.15EE254 pKa = 4.45YY255 pKa = 11.27APIAEE260 pKa = 4.83LAPPTHH266 pKa = 6.35VRR268 pKa = 11.84TKK270 pKa = 10.32PAFTSADD277 pKa = 2.93ITLQGQAISEE287 pKa = 4.31NICRR291 pKa = 11.84VEE293 pKa = 3.96TAILEE298 pKa = 4.39CSDD301 pKa = 2.89ISGGVIEE308 pKa = 5.52RR309 pKa = 11.84EE310 pKa = 3.79IEE312 pKa = 4.26VMDD315 pKa = 3.4NTPRR319 pKa = 11.84IFTVLLDD326 pKa = 4.84DD327 pKa = 5.54LEE329 pKa = 4.67QDD331 pKa = 3.81TIYY334 pKa = 10.6TCVARR339 pKa = 11.84LEE341 pKa = 4.45DD342 pKa = 3.58SAAGNEE348 pKa = 4.25FSFRR352 pKa = 11.84TVPLVEE358 pKa = 4.65KK359 pKa = 10.61DD360 pKa = 4.53LIISDD365 pKa = 3.33ITEE368 pKa = 4.11GGFLVSWIEE377 pKa = 4.39DD378 pKa = 3.33YY379 pKa = 11.16GQQFVIGYY387 pKa = 7.75EE388 pKa = 3.91LTIEE392 pKa = 4.35SLGPAHH398 pKa = 7.37RR399 pKa = 11.84VPDD402 pKa = 4.12GCSVDD407 pKa = 3.69TTVTTVSLSNEE418 pKa = 4.07EE419 pKa = 4.06LSSAFVGGLPDD430 pKa = 3.18YY431 pKa = 10.5AYY433 pKa = 10.21RR434 pKa = 11.84VVLTTYY440 pKa = 8.4YY441 pKa = 10.66TLGLSLQSNTASARR455 pKa = 11.84TLAGVPSLPEE465 pKa = 3.7NLVLDD470 pKa = 4.68FVSGSTEE477 pKa = 3.91AYY479 pKa = 9.01NVSAILSWSSPCEE492 pKa = 3.78LNGGLRR498 pKa = 11.84GFGFNITARR507 pKa = 11.84FSLGGVEE514 pKa = 4.84QSVTVNLGVDD524 pKa = 3.64EE525 pKa = 5.64DD526 pKa = 4.6DD527 pKa = 3.93VNAVISKK534 pKa = 8.8TITDD538 pKa = 3.55INPFFRR544 pKa = 11.84YY545 pKa = 8.61EE546 pKa = 3.79VSVNVIAADD555 pKa = 4.05DD556 pKa = 4.48GPNAVLGFIPPAACVCDD573 pKa = 3.59AAA575 pKa = 5.95

Molecular weight: 61.23 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A0T6B3U6|A0A0T6B3U6_9SCAR LIM domain containing protein OS=Oryctes borbonicus OX=1629725 GN=AMK59_6067 PE=4 SV=1
RR1 pKa = 7.08NGGRR5 pKa = 11.84AKK7 pKa = 10.35HH8 pKa = 5.76GRR10 pKa = 11.84GHH12 pKa = 5.99VKK14 pKa = 10.0PVRR17 pKa = 11.84CTNCARR23 pKa = 11.84CVPKK27 pKa = 10.77DD28 pKa = 3.35KK29 pKa = 10.79AIKK32 pKa = 10.32KK33 pKa = 8.63FVIRR37 pKa = 11.84NIVEE41 pKa = 3.73AAAVRR46 pKa = 11.84DD47 pKa = 3.62ITDD50 pKa = 3.15ASVYY54 pKa = 9.41TSYY57 pKa = 11.64VLPKK61 pKa = 10.2LYY63 pKa = 10.77AKK65 pKa = 10.42LHH67 pKa = 5.53YY68 pKa = 10.0CVSCAIHH75 pKa = 6.27SKK77 pKa = 8.47VVRR80 pKa = 11.84NRR82 pKa = 11.84SKK84 pKa = 11.01EE85 pKa = 3.92EE86 pKa = 3.78RR87 pKa = 11.84KK88 pKa = 10.18KK89 pKa = 9.95RR90 pKa = 11.84TPPARR95 pKa = 11.84NFPGRR100 pKa = 11.84DD101 pKa = 3.11NVRR104 pKa = 11.84VVQQ107 pKa = 3.84

Molecular weight: 12.13 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

8820

0

8820

3587004

99

6462

406.7

46.02

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

5.598 ± 0.025

2.059 ± 0.029

5.564 ± 0.02

6.818 ± 0.037

3.856 ± 0.022

5.195 ± 0.037

2.424 ± 0.012

6.284 ± 0.021

7.037 ± 0.036

9.127 ± 0.038

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.237 ± 0.013

5.566 ± 0.024

4.946 ± 0.035

4.227 ± 0.025

4.977 ± 0.024

7.821 ± 0.034

5.882 ± 0.021

5.996 ± 0.022

1.018 ± 0.009

3.368 ± 0.018
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski