Drechmeria coniospora

Taxonomy: cellular organisms; Eukaryota; Opisthokonta; Fungi; Dikarya; Ascomycota; saccharomyceta; Pezizomycotina; leotiomyceta; sordariomyceta; Sordariomycetes; Hypocreomycetidae; Hypocreales; Ophiocordycipitaceae; Drechmeria

Average proteome isoelectric point is 6.77

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 8231 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A151GP52|A0A151GP52_9HYPO Glycosyl transferase OS=Drechmeria coniospora OX=98403 GN=DCS_05859 PE=3 SV=1
MM1 pKa = 7.42SSWLMDD7 pKa = 4.13DD8 pKa = 4.26YY9 pKa = 11.55KK10 pKa = 11.06RR11 pKa = 11.84EE12 pKa = 3.98TNACEE17 pKa = 4.04EE18 pKa = 4.28FPLAIAQVPEE28 pKa = 3.75VCMYY32 pKa = 10.77GLDD35 pKa = 4.67GIPTAEE41 pKa = 4.6LAWGVNSAIISVVVGAAIISVVVGAAFISVPAVWPRR77 pKa = 11.84ASTFEE82 pKa = 4.32SDD84 pKa = 4.61DD85 pKa = 3.58GG86 pKa = 4.08

Molecular weight: 9.11 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A151GBW3|A0A151GBW3_9HYPO Ras GTPase activating protein OS=Drechmeria coniospora OX=98403 GN=DCS_06557 PE=4 SV=1
MM1 pKa = 7.3VFPRR5 pKa = 11.84LVGTVVVTTALARR18 pKa = 11.84GSSRR22 pKa = 11.84RR23 pKa = 11.84PSASIAIKK31 pKa = 9.94RR32 pKa = 11.84APRR35 pKa = 11.84SVQRR39 pKa = 11.84LRR41 pKa = 11.84LGLRR45 pKa = 11.84RR46 pKa = 11.84AGSHH50 pKa = 5.6SRR52 pKa = 11.84GHH54 pKa = 4.89VHH56 pKa = 7.59LALLKK61 pKa = 9.28VKK63 pKa = 10.2RR64 pKa = 11.84SRR66 pKa = 11.84MMHH69 pKa = 6.31CCQVSLWLSPAVVFAVLARR88 pKa = 11.84SPPRR92 pKa = 11.84LGLTLRR98 pKa = 11.84LPRR101 pKa = 11.84GQHH104 pKa = 4.98SRR106 pKa = 11.84LLASISAHH114 pKa = 4.9VSVGFKK120 pKa = 10.23PVTVTVMRR128 pKa = 4.89

Molecular weight: 14.01 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

8231

0

8231

4273924

50

11802

519.2

56.93

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

9.675 ± 0.03

1.32 ± 0.014

5.927 ± 0.025

5.795 ± 0.031

3.366 ± 0.016

7.3 ± 0.032

2.495 ± 0.015

4.154 ± 0.025

4.356 ± 0.023

8.62 ± 0.04

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.251 ± 0.012

3.174 ± 0.02

6.494 ± 0.037

3.829 ± 0.022

6.869 ± 0.034

8.216 ± 0.039

6.042 ± 0.073

6.408 ± 0.035

1.342 ± 0.011

2.367 ± 0.018
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski