Sugiyamaella lignohabitans

Taxonomy: cellular organisms; Eukaryota; Opisthokonta; Fungi; Dikarya; Ascomycota; saccharomyceta; Saccharomycotina; Saccharomycetes; Saccharomycetales; Trichomonascaceae; Sugiyamaella

Average proteome isoelectric point is 6.26

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 5131 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A161HJP2|A0A161HJP2_9ASCO ATP-dependent RNA helicase NAM7 OS=Sugiyamaella lignohabitans OX=796027 GN=NAM7 PE=3 SV=1
MM1 pKa = 7.08VLAEE5 pKa = 4.17EE6 pKa = 4.69VVHH9 pKa = 6.97FRR11 pKa = 11.84YY12 pKa = 9.66HH13 pKa = 4.87YY14 pKa = 10.34HH15 pKa = 6.01LQLPLSHH22 pKa = 7.12LYY24 pKa = 9.39IHH26 pKa = 7.02IFDD29 pKa = 3.66RR30 pKa = 11.84HH31 pKa = 6.76IPDD34 pKa = 3.83SEE36 pKa = 4.5TVALDD41 pKa = 3.34ASVPAEE47 pKa = 3.7AVVVGIYY54 pKa = 7.39QTHH57 pKa = 6.74LAVDD61 pKa = 4.22TDD63 pKa = 3.96TLADD67 pKa = 3.82TLADD71 pKa = 3.88TLLDD75 pKa = 3.99TPVDD79 pKa = 3.91TAADD83 pKa = 4.08TPVDD87 pKa = 3.8TSVDD91 pKa = 3.9TPVDD95 pKa = 3.88TPVDD99 pKa = 4.09TPAVDD104 pKa = 3.87APAVDD109 pKa = 3.84AAANAAVRR117 pKa = 11.84TWW119 pKa = 2.82

Molecular weight: 12.8 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A167CHK7|A0A167CHK7_9ASCO Slg1p OS=Sugiyamaella lignohabitans OX=796027 GN=SLG1 PE=4 SV=1
MM1 pKa = 7.7SYY3 pKa = 11.04NGIGLKK9 pKa = 7.51TARR12 pKa = 11.84GSGTNGYY19 pKa = 7.74IQKK22 pKa = 10.49SSATEE27 pKa = 3.83RR28 pKa = 11.84FSEE31 pKa = 4.36GVYY34 pKa = 10.55AHH36 pKa = 7.0RR37 pKa = 11.84QRR39 pKa = 11.84QQARR43 pKa = 11.84YY44 pKa = 9.55EE45 pKa = 3.76RR46 pKa = 11.84DD47 pKa = 3.07QRR49 pKa = 11.84IWASTNIADD58 pKa = 4.49RR59 pKa = 11.84YY60 pKa = 8.23VDD62 pKa = 3.3QGIIEE67 pKa = 4.67HH68 pKa = 6.25DD69 pKa = 3.62RR70 pKa = 11.84KK71 pKa = 10.49RR72 pKa = 11.84QVEE75 pKa = 4.49VKK77 pKa = 10.37CCEE80 pKa = 4.03LRR82 pKa = 11.84DD83 pKa = 3.97KK84 pKa = 11.41LEE86 pKa = 4.08EE87 pKa = 5.03AGDD90 pKa = 3.6IAEE93 pKa = 5.36DD94 pKa = 4.1EE95 pKa = 4.41IEE97 pKa = 4.3KK98 pKa = 10.5QVSDD102 pKa = 3.8LRR104 pKa = 11.84KK105 pKa = 9.51EE106 pKa = 3.89LHH108 pKa = 6.63EE109 pKa = 4.38KK110 pKa = 10.25LKK112 pKa = 10.87KK113 pKa = 10.33DD114 pKa = 3.47GQLDD118 pKa = 3.95GSKK121 pKa = 10.19LASTHH126 pKa = 5.29EE127 pKa = 4.14VAEE130 pKa = 4.48AKK132 pKa = 10.39AALNEE137 pKa = 4.0RR138 pKa = 11.84LQTAINQASTKK149 pKa = 9.75KK150 pKa = 10.65VYY152 pKa = 10.37GSSSRR157 pKa = 11.84VRR159 pKa = 11.84RR160 pKa = 11.84GEE162 pKa = 3.9RR163 pKa = 11.84GDD165 pKa = 4.45DD166 pKa = 3.19RR167 pKa = 11.84SEE169 pKa = 4.11PAGHH173 pKa = 6.82RR174 pKa = 11.84RR175 pKa = 11.84DD176 pKa = 3.81GRR178 pKa = 11.84NGPDD182 pKa = 3.61DD183 pKa = 4.25RR184 pKa = 11.84GHH186 pKa = 6.31SKK188 pKa = 10.72RR189 pKa = 11.84SDD191 pKa = 3.25RR192 pKa = 11.84DD193 pKa = 3.19DD194 pKa = 3.53DD195 pKa = 3.69RR196 pKa = 11.84RR197 pKa = 11.84AGHH200 pKa = 6.19SRR202 pKa = 11.84SQRR205 pKa = 11.84GGEE208 pKa = 3.41RR209 pKa = 11.84WGRR212 pKa = 11.84EE213 pKa = 3.72GRR215 pKa = 11.84EE216 pKa = 4.22KK217 pKa = 10.37EE218 pKa = 4.33WKK220 pKa = 10.23ADD222 pKa = 3.72DD223 pKa = 3.74YY224 pKa = 11.98DD225 pKa = 4.15DD226 pKa = 4.19YY227 pKa = 11.75KK228 pKa = 11.02EE229 pKa = 4.09SRR231 pKa = 11.84RR232 pKa = 11.84SYY234 pKa = 10.78DD235 pKa = 2.69RR236 pKa = 11.84RR237 pKa = 11.84GRR239 pKa = 11.84SRR241 pKa = 11.84SQSRR245 pKa = 11.84SRR247 pKa = 11.84SPSRR251 pKa = 11.84SPPASSGRR259 pKa = 11.84GHH261 pKa = 6.19SSRR264 pKa = 11.84RR265 pKa = 11.84ARR267 pKa = 11.84SRR269 pKa = 11.84SPEE272 pKa = 3.38RR273 pKa = 11.84RR274 pKa = 11.84RR275 pKa = 11.84WSRR278 pKa = 11.84SPQRR282 pKa = 11.84RR283 pKa = 11.84SRR285 pKa = 11.84RR286 pKa = 11.84YY287 pKa = 8.13EE288 pKa = 3.93SVSRR292 pKa = 11.84SPPPRR297 pKa = 11.84SRR299 pKa = 11.84RR300 pKa = 11.84RR301 pKa = 11.84SNSPSKK307 pKa = 8.88EE308 pKa = 4.19TRR310 pKa = 11.84SKK312 pKa = 11.08SPQNN316 pKa = 3.39

Molecular weight: 36.49 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

5131

0

5131

2635212

66

5536

513.6

56.74

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

7.545 ± 0.046

0.959 ± 0.011

5.877 ± 0.027

6.301 ± 0.047

3.734 ± 0.022

6.425 ± 0.041

2.188 ± 0.018

5.614 ± 0.024

5.609 ± 0.039

8.866 ± 0.041

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.809 ± 0.013

4.6 ± 0.02

5.253 ± 0.035

3.97 ± 0.033

5.013 ± 0.03

9.808 ± 0.072

6.011 ± 0.047

6.318 ± 0.029

1.082 ± 0.01

3.018 ± 0.018
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski