Struthio camelus australis

Taxonomy: cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; Sauropsida; Sauria; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria

Average proteome isoelectric point is 7.01

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 13815 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A093I8R0|A0A093I8R0_STRCA Uncharacterized protein (Fragment) OS=Struthio camelus australis OX=441894 GN=N308_14746 PE=4 SV=1
SS1 pKa = 6.83RR2 pKa = 11.84LSWLDD7 pKa = 3.18NSGLGFSLDD16 pKa = 3.61YY17 pKa = 9.22PTISLHH23 pKa = 6.36AVSRR27 pKa = 11.84DD28 pKa = 3.07LNAYY32 pKa = 7.9PWEE35 pKa = 4.19HH36 pKa = 6.86LYY38 pKa = 11.74VMVNAKK44 pKa = 10.34FEE46 pKa = 4.16EE47 pKa = 4.43EE48 pKa = 4.19DD49 pKa = 3.44AKK51 pKa = 10.22EE52 pKa = 3.98APMAEE57 pKa = 4.31GEE59 pKa = 4.22EE60 pKa = 4.57EE61 pKa = 4.26EE62 pKa = 6.12DD63 pKa = 3.7SDD65 pKa = 6.27DD66 pKa = 4.98DD67 pKa = 3.91IEE69 pKa = 5.28PIAEE73 pKa = 4.0FRR75 pKa = 11.84FVPSDD80 pKa = 3.36KK81 pKa = 10.88SALEE85 pKa = 3.9AMFSAMCEE93 pKa = 4.27CQALHH98 pKa = 7.39PDD100 pKa = 4.25PEE102 pKa = 6.28DD103 pKa = 3.73EE104 pKa = 6.39DD105 pKa = 4.23SDD107 pKa = 3.72NDD109 pKa = 4.0YY110 pKa = 11.37EE111 pKa = 4.59GEE113 pKa = 4.16EE114 pKa = 4.41YY115 pKa = 10.56DD116 pKa = 4.87VEE118 pKa = 4.22AHH120 pKa = 6.63EE121 pKa = 5.44LGQGDD126 pKa = 3.65IPSFYY131 pKa = 9.93TYY133 pKa = 11.03EE134 pKa = 4.17EE135 pKa = 4.58GLSHH139 pKa = 6.9LTAEE143 pKa = 4.71GQATLEE149 pKa = 4.11RR150 pKa = 11.84LEE152 pKa = 4.74GMLAQSVSSQYY163 pKa = 11.66NMAGVRR169 pKa = 11.84TEE171 pKa = 3.82DD172 pKa = 3.14SVRR175 pKa = 11.84EE176 pKa = 4.08FEE178 pKa = 6.01DD179 pKa = 3.69GMEE182 pKa = 3.99VDD184 pKa = 3.99IAPAVAGQFEE194 pKa = 4.53DD195 pKa = 5.38AEE197 pKa = 4.32VDD199 pKa = 3.59HH200 pKa = 7.08

Molecular weight: 22.35 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A093JTT5|A0A093JTT5_STRCA Multiple coagulation factor deficiency protein 2 OS=Struthio camelus australis OX=441894 GN=N308_10602 PE=4 SV=1
PP1 pKa = 7.17TPRR4 pKa = 11.84PMPAPTPAPRR14 pKa = 11.84SAPTPVPISAPTPRR28 pKa = 11.84SAPTPAPRR36 pKa = 11.84SAPTPVPISAPTPRR50 pKa = 11.84SAPTPAPRR58 pKa = 11.84SAPTPVPISAPTPRR72 pKa = 11.84SAPTPAPRR80 pKa = 11.84SAPTPVPISAPIPAPTPAPAPRR102 pKa = 11.84ATAISAPTPAPILRR116 pKa = 11.84SAPTPP121 pKa = 3.61

Molecular weight: 11.84 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

13815

0

13815

5684286

31

5575

411.5

46.34

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.242 ± 0.019

2.195 ± 0.018

4.996 ± 0.016

7.231 ± 0.026

3.962 ± 0.016

5.731 ± 0.023

2.603 ± 0.01

5.041 ± 0.017

6.542 ± 0.026

9.859 ± 0.028

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.244 ± 0.01

4.301 ± 0.014

5.172 ± 0.027

4.619 ± 0.019

5.286 ± 0.017

8.139 ± 0.034

5.362 ± 0.015

6.324 ± 0.016

1.193 ± 0.008

2.954 ± 0.015
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski