Avian metaavulavirus 11

Taxonomy: Viruses; Riboviria; Orthornavirae; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Paramyxoviridae; Avulavirinae; Metaavulavirus

Average proteome isoelectric point is 6.27

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 7 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|I6UTP1|I6UTP1_9MONO Matrix protein OS=Avian metaavulavirus 11 OX=2560310 PE=4 SV=1
MM1 pKa = 6.99GTCLNNRR8 pKa = 11.84LSTIPSIKK16 pKa = 9.42TVQCILIILSYY27 pKa = 10.14IIPYY31 pKa = 9.91SATDD35 pKa = 3.34NPIADD40 pKa = 4.15RR41 pKa = 11.84SLLRR45 pKa = 11.84AGIVPIYY52 pKa = 10.31SKK54 pKa = 11.02SLSVYY59 pKa = 8.18TNSISGYY66 pKa = 7.89LTVRR70 pKa = 11.84MLPPLPKK77 pKa = 10.47NLTEE81 pKa = 4.47CSQEE85 pKa = 4.08VVSNYY90 pKa = 10.36NKK92 pKa = 9.99TITRR96 pKa = 11.84MFQPISDD103 pKa = 3.49NLMRR107 pKa = 11.84IQEE110 pKa = 4.36GTDD113 pKa = 2.97SGTKK117 pKa = 9.68RR118 pKa = 11.84FVGAVIGSVALGVATSAQITAALAMVQAQDD148 pKa = 3.13NAKK151 pKa = 10.49AIWKK155 pKa = 9.12LKK157 pKa = 9.54EE158 pKa = 4.72AISSTNQAVLEE169 pKa = 4.25LKK171 pKa = 10.69EE172 pKa = 4.24GVNTLGVAVDD182 pKa = 4.72KK183 pKa = 11.03IQGYY187 pKa = 9.6INNEE191 pKa = 3.71ILPSLSEE198 pKa = 4.01LEE200 pKa = 4.38CRR202 pKa = 11.84VNANKK207 pKa = 10.11LASQLNLYY215 pKa = 10.13LIEE218 pKa = 4.33LTTIFGDD225 pKa = 4.07QITNPALTPLSLQALYY241 pKa = 9.87TLAGDD246 pKa = 3.79TMGSFLQYY254 pKa = 10.26IGAQDD259 pKa = 3.69NEE261 pKa = 4.34IEE263 pKa = 4.19SLYY266 pKa = 11.1DD267 pKa = 3.08SGLINGQIVSYY278 pKa = 10.07DD279 pKa = 3.37ASIQTIIIKK288 pKa = 10.22VSIPSISSLSRR299 pKa = 11.84FSIMRR304 pKa = 11.84LATVSSSVGGFEE316 pKa = 4.04KK317 pKa = 10.48TPLVPEE323 pKa = 4.08YY324 pKa = 11.25LLISDD329 pKa = 3.47NHH331 pKa = 7.44IEE333 pKa = 4.05EE334 pKa = 4.56FSIVDD339 pKa = 3.87CKK341 pKa = 10.73EE342 pKa = 3.81SSDD345 pKa = 4.44IFYY348 pKa = 10.58CPQILSMPISTATVEE363 pKa = 4.23CLKK366 pKa = 10.95GRR368 pKa = 11.84IDD370 pKa = 3.36QCIYY374 pKa = 10.36TSQLTILSHH383 pKa = 7.66RR384 pKa = 11.84IVTYY388 pKa = 10.57NGVVVANCFAEE399 pKa = 4.64LCRR402 pKa = 11.84CTNPSYY408 pKa = 10.72IIRR411 pKa = 11.84QDD413 pKa = 2.82RR414 pKa = 11.84DD415 pKa = 3.47VAVTVIDD422 pKa = 3.68KK423 pKa = 10.27DD424 pKa = 3.48LCKK427 pKa = 10.02RR428 pKa = 11.84VQIGDD433 pKa = 3.39IEE435 pKa = 5.53LIVQASIANEE445 pKa = 3.87YY446 pKa = 9.83KK447 pKa = 10.9VNFTVSEE454 pKa = 4.15DD455 pKa = 3.45QLAPSTPIDD464 pKa = 3.36ISNEE468 pKa = 3.91LNSLNQTLDD477 pKa = 3.18KK478 pKa = 10.94VGQLINTSNQILASLNPKK496 pKa = 9.48LVNNTSIIVLIVMGVVLILWLLALTIYY523 pKa = 10.47SIYY526 pKa = 10.59AARR529 pKa = 11.84NLNSIGRR536 pKa = 11.84LAKK539 pKa = 9.95SAYY542 pKa = 9.76ASYY545 pKa = 11.08VADD548 pKa = 3.41KK549 pKa = 10.96NVYY552 pKa = 9.6KK553 pKa = 10.93NEE555 pKa = 4.23STSSSSII562 pKa = 3.44

Molecular weight: 61.28 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|I6UTP6|I6UTP6_9MONO Phosphoprotein OS=Avian metaavulavirus 11 OX=2560310 PE=4 SV=1
MM1 pKa = 7.27SLDD4 pKa = 3.69HH5 pKa = 6.44PTEE8 pKa = 4.83KK9 pKa = 10.39INLPIPTGHH18 pKa = 7.73PDD20 pKa = 3.48LEE22 pKa = 4.35LLAFPIIVEE31 pKa = 4.56RR32 pKa = 11.84GQDD35 pKa = 3.59GQKK38 pKa = 9.1TLQRR42 pKa = 11.84QYY44 pKa = 11.13RR45 pKa = 11.84IGSVGDD51 pKa = 3.24IFGSKK56 pKa = 7.67EE57 pKa = 3.63TGLFLTCYY65 pKa = 10.39GFIEE69 pKa = 4.37EE70 pKa = 5.54SYY72 pKa = 10.86TSTIQGKK79 pKa = 8.43SRR81 pKa = 11.84FFSEE85 pKa = 4.42HH86 pKa = 5.53QGGHH90 pKa = 5.9PKK92 pKa = 9.92IVTAALLPLGCVNPRR107 pKa = 11.84EE108 pKa = 4.56DD109 pKa = 3.62IDD111 pKa = 4.87RR112 pKa = 11.84LIEE115 pKa = 4.16DD116 pKa = 4.07SYY118 pKa = 9.71TLKK121 pKa = 11.02VLISKK126 pKa = 10.25NVDD129 pKa = 2.97SKK131 pKa = 11.31EE132 pKa = 3.8RR133 pKa = 11.84VVFKK137 pKa = 9.64FVNKK141 pKa = 9.24PAALSANKK149 pKa = 10.1LLINGGVILDD159 pKa = 3.9AEE161 pKa = 4.69AFVKK165 pKa = 10.68CPSKK169 pKa = 10.37LTTNMEE175 pKa = 3.68YY176 pKa = 10.3SFRR179 pKa = 11.84VVFVSVTRR187 pKa = 11.84LDD189 pKa = 3.27QTKK192 pKa = 10.06LYY194 pKa = 9.93RR195 pKa = 11.84VNEE198 pKa = 4.54SISKK202 pKa = 9.58IRR204 pKa = 11.84NPHH207 pKa = 6.53LIAVNLEE214 pKa = 4.2VKK216 pKa = 10.21ILLHH220 pKa = 6.02LTPDD224 pKa = 3.42NPQLKK229 pKa = 9.98FLIKK233 pKa = 10.05HH234 pKa = 5.53EE235 pKa = 4.41KK236 pKa = 10.34GGVGSVWIHH245 pKa = 6.17LCNFAKK251 pKa = 10.64KK252 pKa = 10.08NMKK255 pKa = 8.72GTLRR259 pKa = 11.84SIQDD263 pKa = 3.05VTEE266 pKa = 3.97KK267 pKa = 9.93VKK269 pKa = 10.9RR270 pKa = 11.84MALAVSLEE278 pKa = 4.25DD279 pKa = 3.1LWGPTVIVRR288 pKa = 11.84ANGTMSKK295 pKa = 10.2YY296 pKa = 10.93ALGFFSTSKK305 pKa = 9.04TACHH309 pKa = 7.04PIYY312 pKa = 10.7KK313 pKa = 9.94LAPEE317 pKa = 4.07IAKK320 pKa = 10.31IMWSCSSEE328 pKa = 3.77IIEE331 pKa = 5.13ANIIVQGSMKK341 pKa = 10.56NDD343 pKa = 2.97ILTGSDD349 pKa = 3.74LEE351 pKa = 4.44IPSTSKK357 pKa = 10.41IVNSGHH363 pKa = 5.73KK364 pKa = 10.13QFFSFKK370 pKa = 10.27KK371 pKa = 10.2

Molecular weight: 41.35 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

7

0

7

4946

277

2251

706.6

79.02

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

5.803 ± 0.787

1.941 ± 0.294

5.156 ± 0.372

5.317 ± 0.324

3.255 ± 0.522

5.216 ± 0.383

2.082 ± 0.36

8.148 ± 0.69

4.873 ± 0.47

10.938 ± 0.949

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.123 ± 0.301

4.933 ± 0.323

4.792 ± 0.443

4.307 ± 0.396

5.176 ± 0.524

9.3 ± 0.597

6.692 ± 0.438

5.621 ± 0.472

1.072 ± 0.159

3.255 ± 0.385
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski