Paludibacter jiangxiensis

Taxonomy: cellular organisms; Bacteria; FCB group; Bacteroidetes/Chlorobi group; Bacteroidetes; Bacteroidia; Bacteroidales; Paludibacteraceae; Paludibacter

Average proteome isoelectric point is 6.82

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2945 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    

Protein with the lowest isoelectric point:
>tr|A0A171A247|A0A171A247_9BACT GxxExxY protein OS=Paludibacter jiangxiensis OX=681398 GN=PJIAN_3547 PE=4 SV=1
MM1 pKa = 7.41GGYY4 pKa = 10.38AGGLRR9 pKa = 11.84FFLLLAFICFEE20 pKa = 4.45SEE22 pKa = 4.02CSFNRR27 pKa = 11.84MFGQTHH33 pKa = 5.46VEE35 pKa = 3.95AGLSAVALKK44 pKa = 10.86QNTAFSFSPLSTRR57 pKa = 11.84RR58 pKa = 11.84TNVSEE63 pKa = 4.43ANHH66 pKa = 6.76DD67 pKa = 4.02PVASAASVTTLEE79 pKa = 4.11NTPVNGSVTATDD91 pKa = 3.45ADD93 pKa = 4.01GDD95 pKa = 3.96VLTFSKK101 pKa = 10.92VSDD104 pKa = 3.88PAHH107 pKa = 6.19GSVVVNADD115 pKa = 3.11GTFTYY120 pKa = 10.06TPYY123 pKa = 11.06LDD125 pKa = 4.13YY126 pKa = 11.16SGSDD130 pKa = 3.29SFVVGVTDD138 pKa = 4.28GNGGSATATVNVTVNHH154 pKa = 5.74VNQVPVITIRR164 pKa = 11.84QTTMEE169 pKa = 5.3DD170 pKa = 3.21SPIYY174 pKa = 10.45DD175 pKa = 3.54SVSASDD181 pKa = 4.75DD182 pKa = 4.16DD183 pKa = 4.75GDD185 pKa = 4.39NMTFSKK191 pKa = 10.77GISPLHH197 pKa = 6.24GALIVNSNGDD207 pKa = 3.66YY208 pKa = 10.85LYY210 pKa = 10.75TPDD213 pKa = 4.89KK214 pKa = 11.07DD215 pKa = 4.82FNGKK219 pKa = 9.92DD220 pKa = 3.18SFTITVNDD228 pKa = 3.93GNGGISTVKK237 pKa = 10.19IVVTVLPVNDD247 pKa = 4.91DD248 pKa = 3.8PVLTATPVTTQEE260 pKa = 4.0DD261 pKa = 4.86TPVNGSVTATDD272 pKa = 2.95VDD274 pKa = 4.21GDD276 pKa = 3.96VLTITKK282 pKa = 10.53DD283 pKa = 3.11SDD285 pKa = 3.87PLHH288 pKa = 5.82GTVVFNPDD296 pKa = 2.1GTYY299 pKa = 10.48AYY301 pKa = 9.23TPAQDD306 pKa = 3.99YY307 pKa = 11.32YY308 pKa = 11.24GDD310 pKa = 3.9DD311 pKa = 3.65SFTVSVSDD319 pKa = 4.15GNGGTATATVTITITSVNDD338 pKa = 3.45APVITATPVTTPEE351 pKa = 3.95DD352 pKa = 3.89TPVNGTATATDD363 pKa = 3.09VDD365 pKa = 4.23GDD367 pKa = 4.06VLTFALGTAPAHH379 pKa = 5.28GTAVVNSDD387 pKa = 2.74GSYY390 pKa = 10.39SYY392 pKa = 11.55SPAKK396 pKa = 10.3DD397 pKa = 3.6YY398 pKa = 11.76NGDD401 pKa = 3.56DD402 pKa = 3.56SFTIIVSDD410 pKa = 4.18GNGGTATATVTVTITPVNDD429 pKa = 3.85DD430 pKa = 4.05PVLTATPITTPEE442 pKa = 4.87DD443 pKa = 3.36IPVNGSVTATDD454 pKa = 2.95VDD456 pKa = 4.21GDD458 pKa = 3.96VLTITKK464 pKa = 10.42DD465 pKa = 2.95SDD467 pKa = 4.53PIHH470 pKa = 6.73GMVVFNPDD478 pKa = 2.24GTYY481 pKa = 10.11TYY483 pKa = 10.66TPAQDD488 pKa = 3.45YY489 pKa = 11.16HH490 pKa = 8.64GDD492 pKa = 3.54DD493 pKa = 3.78SFTVSVSDD501 pKa = 3.96GNGGTVTATVTVTITSVNDD520 pKa = 3.49NPVLTAPSVTTDD532 pKa = 2.9EE533 pKa = 4.43DD534 pKa = 4.11TSVNGSVTATDD545 pKa = 2.95VDD547 pKa = 4.21GDD549 pKa = 3.96VLTITKK555 pKa = 10.53DD556 pKa = 3.11SDD558 pKa = 3.87PLHH561 pKa = 5.78GTVVFNSDD569 pKa = 2.46GTYY572 pKa = 10.08TYY574 pKa = 10.77TPAQDD579 pKa = 3.35YY580 pKa = 10.93HH581 pKa = 7.47GADD584 pKa = 3.16SFTVNVSDD592 pKa = 4.84GNGGTATGTVSITVISVNDD611 pKa = 3.77DD612 pKa = 3.26PVITVTPVTTQEE624 pKa = 3.92DD625 pKa = 4.82TPVNGTATATDD636 pKa = 3.37VDD638 pKa = 4.15GDD640 pKa = 3.98ALTFSKK646 pKa = 10.9GSDD649 pKa = 3.57PSHH652 pKa = 5.89GTVDD656 pKa = 3.32VHH658 pKa = 8.84SDD660 pKa = 2.88GTYY663 pKa = 9.71TYY665 pKa = 10.66TPVKK669 pKa = 10.17DD670 pKa = 3.87YY671 pKa = 11.66NGDD674 pKa = 3.52DD675 pKa = 3.62SFTISVSDD683 pKa = 3.75GNGGVASATVTVTITPVNDD702 pKa = 3.4APVLSDD708 pKa = 3.57TPVTTQEE715 pKa = 3.9DD716 pKa = 4.75TPLNGSVTATDD727 pKa = 3.24VDD729 pKa = 4.31GDD731 pKa = 3.89ALTYY735 pKa = 11.04SKK737 pKa = 11.15DD738 pKa = 3.3SDD740 pKa = 4.02PSHH743 pKa = 6.04GTLVFNSDD751 pKa = 2.64GTYY754 pKa = 10.08TYY756 pKa = 10.77TPAQDD761 pKa = 3.35YY762 pKa = 10.93HH763 pKa = 7.47GADD766 pKa = 3.33SFTVSVSDD774 pKa = 4.15GNGGTATGTVSITVISVNDD793 pKa = 3.77DD794 pKa = 3.26PVITVTPVTTPEE806 pKa = 3.89DD807 pKa = 3.89TPVNGTATATDD818 pKa = 3.09VDD820 pKa = 4.23GDD822 pKa = 4.02VLTFAVGTAPSHH834 pKa = 5.51GTVDD838 pKa = 3.34VHH840 pKa = 8.84SDD842 pKa = 2.88GTYY845 pKa = 9.71TYY847 pKa = 10.66TPVKK851 pKa = 10.17DD852 pKa = 3.87YY853 pKa = 11.66NGDD856 pKa = 3.52DD857 pKa = 3.62SFTISVSDD865 pKa = 3.75GNGGVASATVTVTITPVNDD884 pKa = 3.4APVLSDD890 pKa = 3.57TPVTTQEE897 pKa = 3.9DD898 pKa = 4.75TPLNGSVTATDD909 pKa = 3.24VDD911 pKa = 4.31GDD913 pKa = 3.89ALTYY917 pKa = 11.04SKK919 pKa = 11.15DD920 pKa = 3.3SDD922 pKa = 4.02PSHH925 pKa = 6.04GTLVFNSDD933 pKa = 2.64GTYY936 pKa = 9.94TYY938 pKa = 10.77TPATDD943 pKa = 3.4YY944 pKa = 11.41HH945 pKa = 8.13GDD947 pKa = 3.47DD948 pKa = 3.86SFTVSVSDD956 pKa = 4.15GNGGTATGTVSITVISVNDD975 pKa = 3.77DD976 pKa = 3.26PVITVTPVTTQEE988 pKa = 4.05DD989 pKa = 4.97TPVSGTVTATDD1000 pKa = 3.16VDD1002 pKa = 4.04GDD1004 pKa = 3.98ALTFSKK1010 pKa = 10.9GSDD1013 pKa = 3.57PSHH1016 pKa = 5.89GTVDD1020 pKa = 3.38VHH1022 pKa = 8.73SDD1024 pKa = 2.87GSYY1027 pKa = 9.93TYY1029 pKa = 10.56TPAKK1033 pKa = 10.1DD1034 pKa = 3.7YY1035 pKa = 11.66NGDD1038 pKa = 3.61DD1039 pKa = 3.31SFMISVSDD1047 pKa = 4.05GNGGTATGTVTVTITPVNDD1066 pKa = 3.95DD1067 pKa = 3.9PVLAATLVTTQEE1079 pKa = 4.93DD1080 pKa = 4.03IPLNASVIATDD1091 pKa = 3.27VDD1093 pKa = 4.06GDD1095 pKa = 3.88ALTYY1099 pKa = 11.04SKK1101 pKa = 11.15DD1102 pKa = 3.3SDD1104 pKa = 4.02PSHH1107 pKa = 6.04GTLVFNSDD1115 pKa = 2.64GTYY1118 pKa = 9.94TYY1120 pKa = 10.77TPATDD1125 pKa = 3.4YY1126 pKa = 11.41HH1127 pKa = 8.13GDD1129 pKa = 3.47DD1130 pKa = 3.86SFTVSVSDD1138 pKa = 4.15GNGGTATGTVSITVISVNDD1157 pKa = 3.77DD1158 pKa = 3.26PVITVTPVTTQEE1170 pKa = 4.05DD1171 pKa = 4.95TPVSGTATATDD1182 pKa = 3.37VDD1184 pKa = 4.15GDD1186 pKa = 3.98ALTFSKK1192 pKa = 10.9GSDD1195 pKa = 3.57PSHH1198 pKa = 5.89GTVDD1202 pKa = 3.38VHH1204 pKa = 8.73SDD1206 pKa = 2.87GSYY1209 pKa = 9.93TYY1211 pKa = 10.56TPAKK1215 pKa = 10.14DD1216 pKa = 3.66YY1217 pKa = 11.67NGDD1220 pKa = 3.57DD1221 pKa = 3.33TFMISVSDD1229 pKa = 3.9GNGGVASGTVTVTITPVNDD1248 pKa = 3.89DD1249 pKa = 3.93PVTTLLSVSTPEE1261 pKa = 3.93DD1262 pKa = 3.77TPLVSTVMAGATDD1275 pKa = 3.19VDD1277 pKa = 4.2GDD1279 pKa = 4.02VLTVTGFTMDD1289 pKa = 3.29GTNYY1293 pKa = 10.33LPGTAVVISGKK1304 pKa = 8.51GTFILNANGDD1314 pKa = 3.89FTLTPDD1320 pKa = 3.44KK1321 pKa = 10.5DD1322 pKa = 3.97YY1323 pKa = 11.63NGAVPSVTYY1332 pKa = 9.37TVVDD1336 pKa = 4.29GNGGTAVGTLNLTVIAVNDD1355 pKa = 3.93DD1356 pKa = 3.41PVITVTPVTTQEE1368 pKa = 3.92DD1369 pKa = 4.82TPVNGTATATDD1380 pKa = 3.37VDD1382 pKa = 4.15GDD1384 pKa = 3.98ALTFSKK1390 pKa = 10.91GSDD1393 pKa = 3.57PVHH1396 pKa = 5.81GTVDD1400 pKa = 3.34VHH1402 pKa = 8.59SDD1404 pKa = 2.87GSYY1407 pKa = 9.93TYY1409 pKa = 10.56TPAKK1413 pKa = 10.25DD1414 pKa = 3.6YY1415 pKa = 11.66NGDD1418 pKa = 3.76DD1419 pKa = 3.6NFTISVSDD1427 pKa = 3.94GNGGTASATVTVTITPVNDD1446 pKa = 3.48APVLIATPVTTQEE1459 pKa = 4.88DD1460 pKa = 4.04IPLNGSVTATDD1471 pKa = 3.24VDD1473 pKa = 3.99GDD1475 pKa = 4.0ALTFSKK1481 pKa = 10.9DD1482 pKa = 2.99SDD1484 pKa = 4.02PSHH1487 pKa = 6.04GTLVFNSDD1495 pKa = 2.64GTYY1498 pKa = 9.94TYY1500 pKa = 10.77TPATDD1505 pKa = 3.4YY1506 pKa = 11.41HH1507 pKa = 8.13GDD1509 pKa = 3.47DD1510 pKa = 3.86SFTVSVSDD1518 pKa = 4.15GNGGTATGTVSITVISVNDD1537 pKa = 3.77DD1538 pKa = 3.26PVITVTPVTTQEE1550 pKa = 3.99DD1551 pKa = 4.36TSVNGTATATDD1562 pKa = 3.37VDD1564 pKa = 4.15GDD1566 pKa = 3.98ALTFSKK1572 pKa = 10.9GSDD1575 pKa = 3.57PSHH1578 pKa = 5.89GTVDD1582 pKa = 3.38VHH1584 pKa = 8.72SDD1586 pKa = 2.8GSYY1589 pKa = 10.85VYY1591 pKa = 10.38TPAKK1595 pKa = 10.28DD1596 pKa = 3.61YY1597 pKa = 11.69NGDD1600 pKa = 3.76DD1601 pKa = 3.6NFTISVSDD1609 pKa = 3.92GNGGAASATVTVIITPVNDD1628 pKa = 3.73APVLTATPVTTQEE1641 pKa = 5.03DD1642 pKa = 3.92IPANGNVTATDD1653 pKa = 3.23VDD1655 pKa = 3.71GDD1657 pKa = 4.06ALIFTKK1663 pKa = 10.67DD1664 pKa = 3.21SDD1666 pKa = 4.28PLHH1669 pKa = 5.78GTVVFNTDD1677 pKa = 2.17GTYY1680 pKa = 10.06TYY1682 pKa = 10.7TPATDD1687 pKa = 3.34YY1688 pKa = 11.25HH1689 pKa = 6.39GADD1692 pKa = 3.11SFMVSVSDD1700 pKa = 4.31GNGGTATATVLITIVSVNDD1719 pKa = 3.63DD1720 pKa = 3.52PVITVTPVTTQEE1732 pKa = 4.16DD1733 pKa = 4.4TSVTGTATATDD1744 pKa = 3.15VDD1746 pKa = 4.11GDD1748 pKa = 4.04VLSFAVGIASSHH1760 pKa = 5.11GTVTVNPDD1768 pKa = 2.67GTYY1771 pKa = 10.09TYY1773 pKa = 10.68IPAKK1777 pKa = 10.16DD1778 pKa = 3.68YY1779 pKa = 11.53NGNDD1783 pKa = 3.3SFTVTVSDD1791 pKa = 4.43GNGGTATATVTVTITSVNDD1810 pKa = 3.06VPVAKK1815 pKa = 10.07DD1816 pKa = 3.31DD1817 pKa = 3.8AVSVVEE1823 pKa = 4.3CTSVSGTVAGNDD1835 pKa = 3.65TPSGDD1840 pKa = 3.76GGNVWSVNKK1849 pKa = 10.08NPSHH1853 pKa = 6.02GTVTLNADD1861 pKa = 3.14GTYY1864 pKa = 9.91IYY1866 pKa = 10.32IPTPNYY1872 pKa = 9.9HH1873 pKa = 5.7GTDD1876 pKa = 3.16TFVYY1880 pKa = 9.92TLTDD1884 pKa = 2.98VDD1886 pKa = 4.63GDD1888 pKa = 3.62QSTATMSITVTPLSEE1903 pKa = 3.88KK1904 pKa = 10.8LLIIKK1909 pKa = 10.2QSTKK1913 pKa = 10.1PQQTSDD1919 pKa = 3.11GSFIWKK1925 pKa = 8.11YY1926 pKa = 9.48TISLTNLQNIIVDD1939 pKa = 4.42NIQVEE1944 pKa = 4.32DD1945 pKa = 4.27DD1946 pKa = 3.49LSKK1949 pKa = 11.24VFTHH1953 pKa = 6.69GEE1955 pKa = 4.13SFKK1958 pKa = 10.12VTNITASGNLKK1969 pKa = 10.95ANGLYY1974 pKa = 10.6DD1975 pKa = 3.86GLNSMSTLLSGSYY1988 pKa = 9.8LAPLSKK1994 pKa = 10.69DD1995 pKa = 3.45SIVIEE2000 pKa = 4.2VQVYY2004 pKa = 7.27SHH2006 pKa = 6.37NFIGNVYY2013 pKa = 9.68NQALFEE2019 pKa = 4.43GFSNSTGQIKK2029 pKa = 10.1DD2030 pKa = 3.61AQSDD2034 pKa = 3.95DD2035 pKa = 3.99PLNTEE2040 pKa = 5.1ASPSSPRR2047 pKa = 11.84TTITFIPEE2055 pKa = 4.01VEE2057 pKa = 3.97LHH2059 pKa = 5.88IPEE2062 pKa = 4.68GFSPNKK2068 pKa = 10.35DD2069 pKa = 3.16MYY2071 pKa = 11.03NDD2073 pKa = 3.39TFEE2076 pKa = 4.57IVHH2079 pKa = 6.3SGNVTLEE2086 pKa = 3.9VEE2088 pKa = 4.55VFNRR2092 pKa = 11.84WGNRR2096 pKa = 11.84VYY2098 pKa = 10.93RR2099 pKa = 11.84STDD2102 pKa = 3.18YY2103 pKa = 11.42HH2104 pKa = 7.34DD2105 pKa = 5.03DD2106 pKa = 3.56WDD2108 pKa = 4.78GKK2110 pKa = 11.06GADD2113 pKa = 3.75NLLGKK2118 pKa = 9.77DD2119 pKa = 4.06LPEE2122 pKa = 3.81GTYY2125 pKa = 10.11FYY2127 pKa = 10.73IVTTTNKK2134 pKa = 8.57KK2135 pKa = 7.56TSEE2138 pKa = 3.98VKK2140 pKa = 10.3KK2141 pKa = 10.44IKK2143 pKa = 10.64GSVTLRR2149 pKa = 11.84RR2150 pKa = 3.8

Molecular weight:
221.38 kDa
Isoelectric point according different methods:






Protein with the highest isoelectric point:
>tr|A0A170YMZ3|A0A170YMZ3_9BACT Kef-type K+ transport system OS=Paludibacter jiangxiensis OX=681398 GN=PJIAN_1511 PE=4 SV=1
MM1 pKa = 7.64HH2 pKa = 7.33FPFDD6 pKa = 3.5VTINFAQSRR15 pKa = 11.84IPNVQNRR22 pKa = 11.84TIKK25 pKa = 10.27VYY27 pKa = 11.1NGITTFLGPNGSGKK41 pKa = 7.79TQLLRR46 pKa = 11.84GLKK49 pKa = 9.13TSLNIHH55 pKa = 6.5LNGKK59 pKa = 8.72KK60 pKa = 9.4IRR62 pKa = 11.84YY63 pKa = 8.64ISAGRR68 pKa = 11.84LGVMEE73 pKa = 5.39RR74 pKa = 11.84YY75 pKa = 9.92RR76 pKa = 11.84SDD78 pKa = 3.2FDD80 pKa = 2.91GWRR83 pKa = 11.84NQTIDD88 pKa = 3.5FDD90 pKa = 4.16SAEE93 pKa = 4.35FGSKK97 pKa = 9.84GAVARR102 pKa = 11.84RR103 pKa = 11.84HH104 pKa = 6.37LLFQVCLMFSPCWRR118 pKa = 11.84RR119 pKa = 11.84FSDD122 pKa = 4.73SVTCAHH128 pKa = 6.1NQRR131 pKa = 11.84GLL133 pKa = 3.4

Molecular weight:
15.17 kDa
Isoelectric point according different methods:






Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2945

0

2945

1080957

26

6762

367.0

41.08

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

7.426 ± 0.045

1.116 ± 0.017

5.266 ± 0.032

5.575 ± 0.058

4.787 ± 0.037

6.894 ± 0.05

1.855 ± 0.02

7.014 ± 0.045

6.809 ± 0.053

9.014 ± 0.051

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.468 ± 0.024

5.461 ± 0.04

3.892 ± 0.023

3.589 ± 0.03

3.963 ± 0.034

6.715 ± 0.058

6.02 ± 0.088

6.658 ± 0.043

1.283 ± 0.021

4.195 ± 0.031

Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski