Seal anellovirus 3

Taxonomy: Viruses; Anelloviridae; Lambdatorquevirus; Torque teno pinniped virus 3

Average proteome isoelectric point is 6.84

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 3 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|V5NF40|V5NF40_9VIRU Capsid protein OS=Seal anellovirus 3 OX=1427156 PE=3 SV=1
MM1 pKa = 7.49MINHH5 pKa = 6.08QPHH8 pKa = 7.59AIQTTGDD15 pKa = 3.51PFYY18 pKa = 10.27HH19 pKa = 5.94QKK21 pKa = 11.18GLVLVSQSNMTQFLFGFAIASNLRR45 pKa = 11.84SLEE48 pKa = 4.03TLSTQEE54 pKa = 4.25SPAGQQRR61 pKa = 11.84RR62 pKa = 11.84SSVKK66 pKa = 10.49RR67 pKa = 11.84QDD69 pKa = 3.96LSQKK73 pKa = 10.0YY74 pKa = 9.18RR75 pKa = 11.84LAPYY79 pKa = 9.92SRR81 pKa = 11.84PDD83 pKa = 3.41LQTLGTYY90 pKa = 9.43LQEE93 pKa = 4.24TSTRR97 pKa = 11.84TASSRR102 pKa = 11.84MRR104 pKa = 11.84VLNEE108 pKa = 3.78LLDD111 pKa = 5.03LIQEE115 pKa = 4.41DD116 pKa = 4.84SQPEE120 pKa = 4.03WKK122 pKa = 9.9PIRR125 pKa = 11.84TSSSKK130 pKa = 10.73DD131 pKa = 3.19VSDD134 pKa = 4.76FDD136 pKa = 3.98TTPGSEE142 pKa = 4.36SEE144 pKa = 4.56DD145 pKa = 3.55SDD147 pKa = 4.73VSYY150 pKa = 11.4LDD152 pKa = 3.77WDD154 pKa = 3.94WEE156 pKa = 4.29DD157 pKa = 3.75EE158 pKa = 4.32PNPGGKK164 pKa = 9.88GPPLVPPTPGPKK176 pKa = 9.34AQGYY180 pKa = 7.22PPHH183 pKa = 6.79FLFF186 pKa = 5.84

Molecular weight: 20.9 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|V5NGP8|V5NGP8_9VIRU ORF2 OS=Seal anellovirus 3 OX=1427156 PE=4 SV=1
MM1 pKa = 8.06AYY3 pKa = 9.86RR4 pKa = 11.84HH5 pKa = 5.89RR6 pKa = 11.84RR7 pKa = 11.84PFRR10 pKa = 11.84RR11 pKa = 11.84YY12 pKa = 7.7RR13 pKa = 11.84RR14 pKa = 11.84RR15 pKa = 11.84YY16 pKa = 8.37RR17 pKa = 11.84RR18 pKa = 11.84WRR20 pKa = 11.84GRR22 pKa = 11.84KK23 pKa = 6.34VHH25 pKa = 6.59HH26 pKa = 6.49RR27 pKa = 11.84RR28 pKa = 11.84TWRR31 pKa = 11.84PFHH34 pKa = 6.47RR35 pKa = 11.84FGWRR39 pKa = 11.84RR40 pKa = 11.84RR41 pKa = 11.84WRR43 pKa = 11.84HH44 pKa = 4.77PRR46 pKa = 11.84RR47 pKa = 11.84GSAVVRR53 pKa = 11.84ITRR56 pKa = 11.84PKK58 pKa = 7.13KK59 pKa = 9.24HH60 pKa = 6.56KK61 pKa = 10.35YY62 pKa = 7.45ITVTGWEE69 pKa = 4.22PLGNCCVTDD78 pKa = 3.65SAGAEE83 pKa = 3.85AKK85 pKa = 10.23PYY87 pKa = 10.74EE88 pKa = 4.77DD89 pKa = 4.46LDD91 pKa = 4.63KK92 pKa = 11.43DD93 pKa = 3.82VATWCTQNNNAVWHH107 pKa = 5.67GTFGHH112 pKa = 7.13HH113 pKa = 5.93YY114 pKa = 8.2LTWGLLVQRR123 pKa = 11.84AQYY126 pKa = 8.59YY127 pKa = 8.59FCKK130 pKa = 10.42FSSDD134 pKa = 3.45YY135 pKa = 10.79RR136 pKa = 11.84GYY138 pKa = 11.09DD139 pKa = 3.35YY140 pKa = 11.57LSFCGGYY147 pKa = 8.81IWLPYY152 pKa = 10.29LYY154 pKa = 10.0APYY157 pKa = 9.8MFWLDD162 pKa = 3.38PCIIDD167 pKa = 3.96PQEE170 pKa = 4.26KK171 pKa = 10.39LMNFQLYY178 pKa = 10.21KK179 pKa = 10.23KK180 pKa = 9.74DD181 pKa = 3.61SSWFHH186 pKa = 6.48PGIFMNRR193 pKa = 11.84KK194 pKa = 7.12GARR197 pKa = 11.84FIPPSYY203 pKa = 9.1QTYY206 pKa = 7.55THH208 pKa = 6.82HH209 pKa = 6.66LYY211 pKa = 10.53KK212 pKa = 10.45RR213 pKa = 11.84LRR215 pKa = 11.84VPRR218 pKa = 11.84PPTWEE223 pKa = 3.83GVYY226 pKa = 9.12TIPAATQYY234 pKa = 11.32ILTHH238 pKa = 5.73WAWTTVTTNTAFFDD252 pKa = 4.51GACNQSGTTNTCEE265 pKa = 3.61AVPWFMKK272 pKa = 9.86GHH274 pKa = 5.23QPAGKK279 pKa = 9.33FAQKK283 pKa = 8.29LTKK286 pKa = 9.56WKK288 pKa = 9.25TDD290 pKa = 3.26TADD293 pKa = 3.15GTKK296 pKa = 10.66NLDD299 pKa = 3.5CFGDD303 pKa = 3.77PRR305 pKa = 11.84SWWVNRR311 pKa = 11.84RR312 pKa = 11.84KK313 pKa = 10.2YY314 pKa = 10.56DD315 pKa = 3.82DD316 pKa = 4.44KK317 pKa = 11.83SSTTCNTDD325 pKa = 1.96NWGPFLPSKK334 pKa = 10.18GTGTGVTKK342 pKa = 10.54QYY344 pKa = 11.39DD345 pKa = 3.89SISFWFRR352 pKa = 11.84YY353 pKa = 8.89RR354 pKa = 11.84FKK356 pKa = 10.94FKK358 pKa = 11.06VSGDD362 pKa = 3.81SIYY365 pKa = 10.97TRR367 pKa = 11.84IPSRR371 pKa = 11.84TATEE375 pKa = 4.57VISEE379 pKa = 4.27APGPQSKK386 pKa = 9.51IQARR390 pKa = 11.84SILKK394 pKa = 8.11TRR396 pKa = 11.84PPDD399 pKa = 4.13LGDD402 pKa = 3.54ILAGDD407 pKa = 4.21LDD409 pKa = 4.34EE410 pKa = 7.64DD411 pKa = 5.42GILTDD416 pKa = 4.05EE417 pKa = 4.1SLEE420 pKa = 4.24RR421 pKa = 11.84IIRR424 pKa = 11.84SHH426 pKa = 7.78PGRR429 pKa = 11.84QPAGVEE435 pKa = 3.88ADD437 pKa = 3.57PDD439 pKa = 3.5QLKK442 pKa = 9.83QRR444 pKa = 11.84RR445 pKa = 11.84VRR447 pKa = 11.84LRR449 pKa = 11.84HH450 pKa = 5.9DD451 pKa = 3.57PGVRR455 pKa = 11.84KK456 pKa = 9.59RR457 pKa = 11.84RR458 pKa = 11.84LRR460 pKa = 11.84RR461 pKa = 11.84LLSGLGLGRR470 pKa = 11.84RR471 pKa = 11.84TQSGGEE477 pKa = 4.26GPPPSPPHH485 pKa = 5.82PWAA488 pKa = 4.64

Molecular weight: 57.15 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

3

0

3

757

83

488

252.3

29.16

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

4.756 ± 0.537

1.585 ± 0.615

6.077 ± 0.367

3.303 ± 0.805

4.227 ± 0.264

7.398 ± 0.614

2.906 ± 0.556

4.359 ± 1.414

5.02 ± 0.674

7.53 ± 1.301

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.453 ± 0.402

2.906 ± 0.412

7.926 ± 0.713

4.756 ± 1.346

8.983 ± 1.954

7.001 ± 1.905

7.53 ± 0.609

4.227 ± 0.644

3.435 ± 0.836

4.624 ± 0.556
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski