Saccharomyces cerevisiae virus L-BC (ScV-L-BC) (ScVLa)
Average proteome isoelectric point is 6.05
Get precalculated fractions of proteins
Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
All
Note: above files contain also dissociation constants (pKa)
Virtual 2D-PAGE plot for 2 proteins (isoelectric point calculated using IPC2_protein)
Get csv file with sequences according to given criteria:
* You can choose from 21 different methods for calculating isoelectric point
Summary statistics related to proteome-wise predictions
Protein with the lowest isoelectric point:
>sp|Q87026|GAG_SCVLB Major capsid protein OS=Saccharomyces cerevisiae virus L-BC OX=42478 GN=gag PE=3 SV=1
MM1 pKa = 7.79 SSLLNSLLPEE11 pKa = 3.98 YY12 pKa = 10.13 FKK14 pKa = 11.16 PKK16 pKa = 9.88 TNLNINSSRR25 pKa = 11.84 VQYY28 pKa = 10.74 GFNARR33 pKa = 11.84 IDD35 pKa = 3.64 MQYY38 pKa = 10.97 EE39 pKa = 4.1 DD40 pKa = 5.4 DD41 pKa = 3.72 SGTRR45 pKa = 11.84 KK46 pKa = 9.99 GSRR49 pKa = 11.84 PNAFMSNTVAFIGNYY64 pKa = 9.53 EE65 pKa = 4.24 GIIVDD70 pKa = 5.8 DD71 pKa = 4.13 IPILDD76 pKa = 4.45 GLRR79 pKa = 11.84 ADD81 pKa = 4.41 IFDD84 pKa = 3.7 THH86 pKa = 7.28 GDD88 pKa = 3.4 LDD90 pKa = 3.69 MGLVEE95 pKa = 5.19 DD96 pKa = 4.95 ALSKK100 pKa = 10.03 STMIRR105 pKa = 11.84 RR106 pKa = 11.84 NVPTYY111 pKa = 8.84 TAYY114 pKa = 10.4 ASEE117 pKa = 4.33 LLYY120 pKa = 10.82 KK121 pKa = 10.66 RR122 pKa = 11.84 NLTSLFYY129 pKa = 11.48 NMLRR133 pKa = 11.84 LYY135 pKa = 10.05 YY136 pKa = 9.15 IKK138 pKa = 10.23 KK139 pKa = 7.92 WGSIKK144 pKa = 10.31 YY145 pKa = 9.16 EE146 pKa = 4.02 KK147 pKa = 10.59 DD148 pKa = 2.95 AIFYY152 pKa = 10.67 DD153 pKa = 3.81 NGHH156 pKa = 6.59 ACLLNRR162 pKa = 11.84 QLFPKK167 pKa = 10.53 SRR169 pKa = 11.84 DD170 pKa = 3.29 ASLEE174 pKa = 4.02 SSLSLPEE181 pKa = 4.79 AEE183 pKa = 4.96 IAMLDD188 pKa = 3.57 PGLEE192 pKa = 4.15 FPEE195 pKa = 4.18 EE196 pKa = 4.04 DD197 pKa = 3.35 VPAILWHH204 pKa = 6.01 GRR206 pKa = 11.84 VSSRR210 pKa = 11.84 ATCILGQACSEE221 pKa = 4.27 FAPLAPFSIAHH232 pKa = 6.26 YY233 pKa = 10.32 SPQLTRR239 pKa = 11.84 KK240 pKa = 9.88 LFVNAPAGIEE250 pKa = 4.03 PSSGRR255 pKa = 11.84 YY256 pKa = 4.76 THH258 pKa = 7.03 EE259 pKa = 4.34 DD260 pKa = 3.16 VKK262 pKa = 11.25 DD263 pKa = 4.12 AITILVSANQAYY275 pKa = 9.34 TDD277 pKa = 4.22 FEE279 pKa = 4.14 AAYY282 pKa = 11.04 LMLAQTLVSPVPRR295 pKa = 11.84 TAEE298 pKa = 3.52 ASAWFINAGMVNMPTLSCANGYY320 pKa = 9.6 YY321 pKa = 9.89 PALTNVNPYY330 pKa = 10.02 HH331 pKa = 7.59 RR332 pKa = 11.84 LDD334 pKa = 3.32 TWKK337 pKa = 9.23 DD338 pKa = 3.65 TLNHH342 pKa = 5.26 WVAYY346 pKa = 9.24 PDD348 pKa = 3.2 MLFYY352 pKa = 10.9 HH353 pKa = 6.39 SVAMIEE359 pKa = 4.05 SCYY362 pKa = 10.88 VEE364 pKa = 4.59 LGNVARR370 pKa = 11.84 VSDD373 pKa = 3.55 SDD375 pKa = 4.87 AINKK379 pKa = 7.28 YY380 pKa = 7.99 TFTEE384 pKa = 4.36 LSVQGRR390 pKa = 11.84 PVMNRR395 pKa = 11.84 GIIVDD400 pKa = 4.22 LTLVAMRR407 pKa = 11.84 TGRR410 pKa = 11.84 EE411 pKa = 3.3 ISLPYY416 pKa = 9.8 PVSCGLTRR424 pKa = 11.84 TDD426 pKa = 4.54 ALLQGTEE433 pKa = 3.39 IHH435 pKa = 6.3 VPVVVKK441 pKa = 10.7 DD442 pKa = 3.14 IDD444 pKa = 3.38 MPQYY448 pKa = 11.22 YY449 pKa = 10.12 NAIDD453 pKa = 3.62 KK454 pKa = 10.79 DD455 pKa = 4.11 VIEE458 pKa = 4.61 GQEE461 pKa = 3.96 TVIKK465 pKa = 10.52 VKK467 pKa = 10.28 QLPPAMYY474 pKa = 9.35 PIYY477 pKa = 10.07 TYY479 pKa = 11.07 GINTTEE485 pKa = 4.56 FYY487 pKa = 10.87 SDD489 pKa = 3.3 HH490 pKa = 7.53 FEE492 pKa = 4.4 DD493 pKa = 3.84 QVQVEE498 pKa = 4.61 MAPIDD503 pKa = 3.46 NGKK506 pKa = 10.09 AVFNDD511 pKa = 2.69 ARR513 pKa = 11.84 KK514 pKa = 9.12 FSKK517 pKa = 10.39 FMSIMRR523 pKa = 11.84 MMGNDD528 pKa = 3.1 VTATDD533 pKa = 4.24 LVTGRR538 pKa = 11.84 KK539 pKa = 8.19 VSNWADD545 pKa = 3.22 NSSGRR550 pKa = 11.84 FLYY553 pKa = 10.57 TDD555 pKa = 3.43 VKK557 pKa = 11.44 YY558 pKa = 10.62 EE559 pKa = 3.96 GQTAFLVDD567 pKa = 3.75 MDD569 pKa = 4.31 TVKK572 pKa = 10.77 ARR574 pKa = 11.84 DD575 pKa = 3.87 HH576 pKa = 6.42 CWVSIVDD583 pKa = 3.98 PNGTMNLSYY592 pKa = 11.53 KK593 pKa = 7.68 MTNFRR598 pKa = 11.84 AAMFSRR604 pKa = 11.84 NKK606 pKa = 8.86 PLYY609 pKa = 7.4 MTGGSVRR616 pKa = 11.84 TIATGNYY623 pKa = 8.27 RR624 pKa = 11.84 DD625 pKa = 3.3 AAEE628 pKa = 4.47 RR629 pKa = 11.84 LRR631 pKa = 11.84 AMDD634 pKa = 3.2 EE635 pKa = 4.1 TLRR638 pKa = 11.84 LKK640 pKa = 10.31 PFKK643 pKa = 9.82 ITEE646 pKa = 4.03 KK647 pKa = 10.78 LDD649 pKa = 3.41 FRR651 pKa = 11.84 VAAYY655 pKa = 9.08 AIPSLSGSNMPSLHH669 pKa = 6.39 HH670 pKa = 6.38 QEE672 pKa = 3.78 QLQISEE678 pKa = 4.22 VDD680 pKa = 3.59 AEE682 pKa = 4.62 PINPIGEE689 pKa = 4.65 DD690 pKa = 3.77 EE691 pKa = 4.79 LPPDD695 pKa = 3.86 IEE697 pKa = 4.18
Molecular weight: 78.32 kDa
Isoelectric point according different methods:
IPC2.protein.svr19 4.998
IPC2_protein 5.08
IPC_protein 5.054
Toseland 5.016
ProMoST 5.181
Dawson 5.067
Bjellqvist 5.207
Wikipedia 4.965
Rodwell 4.978
Grimsley 4.94
Solomon 5.067
Lehninger 5.029
Nozaki 5.194
DTASelect 5.385
Thurlkill 5.029
EMBOSS 5.016
Sillero 5.27
Patrickios 3.757
IPC_peptide 5.08
IPC2_peptide 5.258
IPC2.peptide.svr19 5.239
Protein with the highest isoelectric point:
>sp|Q87026|GAG_SCVLB Major capsid protein OS=Saccharomyces cerevisiae virus L-BC OX=42478 GN=gag PE=3 SV=1
MM1 pKa = 7.79 SSLLNSLLPEE11 pKa = 3.98 YY12 pKa = 10.13 FKK14 pKa = 11.16 PKK16 pKa = 9.88 TNLNINSSRR25 pKa = 11.84 VQYY28 pKa = 10.74 GFNARR33 pKa = 11.84 IDD35 pKa = 3.64 MQYY38 pKa = 10.97 EE39 pKa = 4.1 DD40 pKa = 5.4 DD41 pKa = 3.72 SGTRR45 pKa = 11.84 KK46 pKa = 9.99 GSRR49 pKa = 11.84 PNAFMSNTVAFIGNYY64 pKa = 9.53 EE65 pKa = 4.24 GIIVDD70 pKa = 5.8 DD71 pKa = 4.13 IPILDD76 pKa = 4.45 GLRR79 pKa = 11.84 ADD81 pKa = 4.41 IFDD84 pKa = 3.7 THH86 pKa = 7.28 GDD88 pKa = 3.4 LDD90 pKa = 3.69 MGLVEE95 pKa = 5.19 DD96 pKa = 4.95 ALSKK100 pKa = 10.03 STMIRR105 pKa = 11.84 RR106 pKa = 11.84 NVPTYY111 pKa = 8.84 TAYY114 pKa = 10.4 ASEE117 pKa = 4.33 LLYY120 pKa = 10.82 KK121 pKa = 10.66 RR122 pKa = 11.84 NLTSLFYY129 pKa = 11.48 NMLRR133 pKa = 11.84 LYY135 pKa = 10.05 YY136 pKa = 9.15 IKK138 pKa = 10.23 KK139 pKa = 7.92 WGSIKK144 pKa = 10.31 YY145 pKa = 9.16 EE146 pKa = 4.02 KK147 pKa = 10.59 DD148 pKa = 2.95 AIFYY152 pKa = 10.67 DD153 pKa = 3.81 NGHH156 pKa = 6.59 ACLLNRR162 pKa = 11.84 QLFPKK167 pKa = 10.53 SRR169 pKa = 11.84 DD170 pKa = 3.29 ASLEE174 pKa = 4.02 SSLSLPEE181 pKa = 4.79 AEE183 pKa = 4.96 IAMLDD188 pKa = 3.57 PGLEE192 pKa = 4.15 FPEE195 pKa = 4.18 EE196 pKa = 4.04 DD197 pKa = 3.35 VPAILWHH204 pKa = 6.01 GRR206 pKa = 11.84 VSSRR210 pKa = 11.84 ATCILGQACSEE221 pKa = 4.27 FAPLAPFSIAHH232 pKa = 6.26 YY233 pKa = 10.32 SPQLTRR239 pKa = 11.84 KK240 pKa = 9.88 LFVNAPAGIEE250 pKa = 4.03 PSSGRR255 pKa = 11.84 YY256 pKa = 4.76 THH258 pKa = 7.03 EE259 pKa = 4.34 DD260 pKa = 3.16 VKK262 pKa = 11.25 DD263 pKa = 4.12 AITILVSANQAYY275 pKa = 9.34 TDD277 pKa = 4.22 FEE279 pKa = 4.14 AAYY282 pKa = 11.04 LMLAQTLVSPVPRR295 pKa = 11.84 TAEE298 pKa = 3.52 ASAWFINAGMVNMPTLSCANGYY320 pKa = 9.6 YY321 pKa = 9.89 PALTNVNPYY330 pKa = 10.02 HH331 pKa = 7.59 RR332 pKa = 11.84 LDD334 pKa = 3.32 TWKK337 pKa = 9.23 DD338 pKa = 3.65 TLNHH342 pKa = 5.26 WVAYY346 pKa = 9.24 PDD348 pKa = 3.2 MLFYY352 pKa = 10.9 HH353 pKa = 6.39 SVAMIEE359 pKa = 4.05 SCYY362 pKa = 10.88 VEE364 pKa = 4.59 LGNVARR370 pKa = 11.84 VSDD373 pKa = 3.55 SDD375 pKa = 4.87 AINKK379 pKa = 7.28 YY380 pKa = 7.99 TFTEE384 pKa = 4.36 LSVQGRR390 pKa = 11.84 PVMNRR395 pKa = 11.84 GIIVDD400 pKa = 4.22 LTLVAMRR407 pKa = 11.84 TGRR410 pKa = 11.84 EE411 pKa = 3.3 ISLPYY416 pKa = 9.8 PVSCGLTRR424 pKa = 11.84 TDD426 pKa = 4.54 ALLQGTEE433 pKa = 3.39 IHH435 pKa = 6.3 VPVVVKK441 pKa = 10.7 DD442 pKa = 3.14 IDD444 pKa = 3.38 MPQYY448 pKa = 11.22 YY449 pKa = 10.12 NAIDD453 pKa = 3.62 KK454 pKa = 10.79 DD455 pKa = 4.11 VIEE458 pKa = 4.61 GQEE461 pKa = 3.96 TVIKK465 pKa = 10.52 VKK467 pKa = 10.28 QLPPAMYY474 pKa = 9.35 PIYY477 pKa = 10.07 TYY479 pKa = 11.07 GINTTEE485 pKa = 4.56 FYY487 pKa = 10.87 SDD489 pKa = 3.3 HH490 pKa = 7.53 FEE492 pKa = 4.4 DD493 pKa = 3.84 QVQVEE498 pKa = 4.61 MAPIDD503 pKa = 3.46 NGKK506 pKa = 10.09 AVFNDD511 pKa = 2.69 ARR513 pKa = 11.84 KK514 pKa = 9.12 FSKK517 pKa = 10.39 FMSIMRR523 pKa = 11.84 MMGNDD528 pKa = 3.1 VTATDD533 pKa = 4.24 LVTGRR538 pKa = 11.84 KK539 pKa = 8.19 VSNWADD545 pKa = 3.22 NSSGRR550 pKa = 11.84 FLYY553 pKa = 10.57 TDD555 pKa = 3.43 VKK557 pKa = 11.44 YY558 pKa = 10.62 EE559 pKa = 3.96 GQTAFLVDD567 pKa = 3.75 MDD569 pKa = 4.31 TVKK572 pKa = 10.77 ARR574 pKa = 11.84 DD575 pKa = 3.87 HH576 pKa = 6.42 CWVSIVDD583 pKa = 3.98 PNGTMNLSYY592 pKa = 11.53 KK593 pKa = 7.68 MTNFRR598 pKa = 11.84 AAMFSRR604 pKa = 11.84 NKK606 pKa = 8.86 PLYY609 pKa = 7.4 MTGGSVRR616 pKa = 11.84 TIATGNYY623 pKa = 8.27 RR624 pKa = 11.84 DD625 pKa = 3.3 AAEE628 pKa = 4.47 RR629 pKa = 11.84 LRR631 pKa = 11.84 AMDD634 pKa = 3.2 EE635 pKa = 4.1 TLRR638 pKa = 11.84 LKK640 pKa = 10.31 PFKK643 pKa = 9.82 ITEE646 pKa = 4.19 KK647 pKa = 10.93 LDD649 pKa = 4.0 FSCSSLRR656 pKa = 11.84 DD657 pKa = 3.63 TKK659 pKa = 10.94 FVGQQYY665 pKa = 11.17 AILTPSGTTTDD676 pKa = 3.09 IRR678 pKa = 11.84 SGRR681 pKa = 11.84 GTNQSYY687 pKa = 10.31 RR688 pKa = 11.84 RR689 pKa = 11.84 GRR691 pKa = 11.84 TSTGYY696 pKa = 10.6 RR697 pKa = 11.84 IGVEE701 pKa = 4.05 DD702 pKa = 6.3 DD703 pKa = 3.46 EE704 pKa = 6.01 DD705 pKa = 5.76 LDD707 pKa = 4.18 IGTVKK712 pKa = 10.88 YY713 pKa = 10.26 IVPLYY718 pKa = 11.01 LNGDD722 pKa = 3.56 NVAQNCLEE730 pKa = 4.11 ATHH733 pKa = 6.38 VLIKK737 pKa = 10.49 ACSIANRR744 pKa = 11.84 IVDD747 pKa = 4.43 DD748 pKa = 4.67 GEE750 pKa = 4.49 GHH752 pKa = 7.31 CFTQQGLAQQWIFHH766 pKa = 6.26 RR767 pKa = 11.84 GEE769 pKa = 4.1 MIFVKK774 pKa = 10.32 AVRR777 pKa = 11.84 IGQLNAYY784 pKa = 8.64 YY785 pKa = 10.65 VDD787 pKa = 3.68 YY788 pKa = 11.35 KK789 pKa = 11.39 NVTNYY794 pKa = 10.5 SLKK797 pKa = 9.67 TAAQVGATISNNLRR811 pKa = 11.84 HH812 pKa = 6.14 GFVDD816 pKa = 3.74 NQQDD820 pKa = 3.36 AYY822 pKa = 9.26 TRR824 pKa = 11.84 LVANYY829 pKa = 9.76 SDD831 pKa = 3.3 TRR833 pKa = 11.84 KK834 pKa = 9.68 WIRR837 pKa = 11.84 DD838 pKa = 3.28 NFTYY842 pKa = 10.31 NYY844 pKa = 10.7 NMEE847 pKa = 4.14 KK848 pKa = 9.77 EE849 pKa = 4.38 KK850 pKa = 11.1 YY851 pKa = 10.13 RR852 pKa = 11.84 ITQYY856 pKa = 10.64 HH857 pKa = 5.49 HH858 pKa = 4.14 THH860 pKa = 5.48 VRR862 pKa = 11.84 LKK864 pKa = 10.99 DD865 pKa = 3.43 LFPSRR870 pKa = 11.84 KK871 pKa = 8.23 IVKK874 pKa = 10.22 LEE876 pKa = 4.1 GYY878 pKa = 7.65 EE879 pKa = 4.09 ALLAMMLDD887 pKa = 3.51 RR888 pKa = 11.84 FNNIEE893 pKa = 4.16 STHH896 pKa = 4.55 VTFFTYY902 pKa = 10.27 LRR904 pKa = 11.84 ALPDD908 pKa = 3.25 RR909 pKa = 11.84 EE910 pKa = 4.03 KK911 pKa = 11.02 EE912 pKa = 4.25 VFISLVLNYY921 pKa = 10.5 NGLGRR926 pKa = 11.84 EE927 pKa = 4.08 WLKK930 pKa = 11.27 SEE932 pKa = 4.25 GVRR935 pKa = 11.84 AKK937 pKa = 10.0 QAQGTVKK944 pKa = 10.74 YY945 pKa = 10.82 DD946 pKa = 3.26 MSKK949 pKa = 10.65 LFEE952 pKa = 5.06 LNVLEE957 pKa = 4.55 NGVDD961 pKa = 4.23 EE962 pKa = 4.43 EE963 pKa = 4.65 VDD965 pKa = 3.14 WEE967 pKa = 4.2 KK968 pKa = 11.21 EE969 pKa = 3.53 KK970 pKa = 11.1 RR971 pKa = 11.84 NRR973 pKa = 11.84 SDD975 pKa = 2.58 IKK977 pKa = 10.05 TVNISYY983 pKa = 10.98 AKK985 pKa = 9.99 VLEE988 pKa = 4.16 HH989 pKa = 6.46 CRR991 pKa = 11.84 EE992 pKa = 4.06 LFIMARR998 pKa = 11.84 AEE1000 pKa = 4.5 GKK1002 pKa = 10.25 RR1003 pKa = 11.84 PMRR1006 pKa = 11.84 MKK1008 pKa = 9.22 WQEE1011 pKa = 3.58 YY1012 pKa = 5.02 WRR1014 pKa = 11.84 QRR1016 pKa = 11.84 AVIMPGGSVHH1026 pKa = 5.81 SQHH1029 pKa = 6.87 PVEE1032 pKa = 3.98 QDD1034 pKa = 3.51 VIRR1037 pKa = 11.84 VLPRR1041 pKa = 11.84 EE1042 pKa = 3.92 IRR1044 pKa = 11.84 SKK1046 pKa = 10.87 KK1047 pKa = 9.74 GVASVMPYY1055 pKa = 10.19 KK1056 pKa = 9.33 EE1057 pKa = 3.83 QKK1059 pKa = 9.77 YY1060 pKa = 7.14 FTSRR1064 pKa = 11.84 RR1065 pKa = 11.84 PEE1067 pKa = 3.31 IHH1069 pKa = 7.1 AYY1071 pKa = 9.53 TSTKK1075 pKa = 10.2 YY1076 pKa = 9.83 EE1077 pKa = 3.86 WGKK1080 pKa = 10.21 VRR1082 pKa = 11.84 ALYY1085 pKa = 10.75 GCDD1088 pKa = 3.65 FSSHH1092 pKa = 4.74 TMADD1096 pKa = 3.97 FGLLQCEE1103 pKa = 4.18 DD1104 pKa = 4.04 TFPGFVPTGSYY1115 pKa = 11.17 ANEE1118 pKa = 4.14 DD1119 pKa = 3.72 YY1120 pKa = 11.3 VRR1122 pKa = 11.84 TRR1124 pKa = 11.84 IAGTHH1129 pKa = 5.19 SLIPFCYY1136 pKa = 10.52 DD1137 pKa = 2.86 FDD1139 pKa = 4.94 DD1140 pKa = 5.3 FNSQHH1145 pKa = 6.43 SKK1147 pKa = 10.4 EE1148 pKa = 4.24 AMQAVIDD1155 pKa = 3.79 AWISVYY1161 pKa = 10.24 HH1162 pKa = 7.37 DD1163 pKa = 4.64 KK1164 pKa = 10.65 LTDD1167 pKa = 3.76 DD1168 pKa = 4.3 QIEE1171 pKa = 4.06 AAKK1174 pKa = 8.09 WTRR1177 pKa = 11.84 NSVDD1181 pKa = 3.19 RR1182 pKa = 11.84 MVAHH1186 pKa = 6.21 QPNTGEE1192 pKa = 4.18 TYY1194 pKa = 10.41 DD1195 pKa = 3.48 VKK1197 pKa = 10.92 GTLFSGWRR1205 pKa = 11.84 LTTFFNTALNYY1216 pKa = 10.43 CYY1218 pKa = 10.29 LANAGINSLVPTSLHH1233 pKa = 6.3 NGDD1236 pKa = 4.92 DD1237 pKa = 3.56 VFAGIRR1243 pKa = 11.84 TIADD1247 pKa = 4.77 GISLIKK1253 pKa = 10.32 NAAATGVRR1261 pKa = 11.84 ANTTKK1266 pKa = 10.53 MNIGTIAEE1274 pKa = 4.25 FLRR1277 pKa = 11.84 VDD1279 pKa = 3.49 MRR1281 pKa = 11.84 AKK1283 pKa = 10.63 NSTGSQYY1290 pKa = 9.65 LTRR1293 pKa = 11.84 GIATFTHH1300 pKa = 6.05 SRR1302 pKa = 11.84 VEE1304 pKa = 3.89 SDD1306 pKa = 4.06 APLTLRR1312 pKa = 11.84 NLVSAYY1318 pKa = 7.06 KK1319 pKa = 9.76 TRR1321 pKa = 11.84 YY1322 pKa = 10.08 DD1323 pKa = 3.7 EE1324 pKa = 4.09 ILARR1328 pKa = 11.84 GASIDD1333 pKa = 3.62 NMKK1336 pKa = 10.09 PLYY1339 pKa = 10.13 RR1340 pKa = 11.84 KK1341 pKa = 9.26 QLFFARR1347 pKa = 11.84 KK1348 pKa = 8.86 LFNVEE1353 pKa = 3.92 KK1354 pKa = 10.67 DD1355 pKa = 3.13 IVDD1358 pKa = 3.72 NLITMDD1364 pKa = 4.14 ISCGGLQEE1372 pKa = 4.22 KK1373 pKa = 10.63 GRR1375 pKa = 11.84 VSEE1378 pKa = 4.27 MVLQEE1383 pKa = 3.86 VDD1385 pKa = 2.97 IEE1387 pKa = 4.75 NIDD1390 pKa = 3.76 SYY1392 pKa = 11.57 RR1393 pKa = 11.84 KK1394 pKa = 7.47 TRR1396 pKa = 11.84 MIAKK1400 pKa = 10.09 LIDD1403 pKa = 3.86 KK1404 pKa = 10.66 GVGDD1408 pKa = 3.68 YY1409 pKa = 9.88 TAFLKK1414 pKa = 10.42 TNFSEE1419 pKa = 4.13 IADD1422 pKa = 4.54 AITRR1426 pKa = 11.84 EE1427 pKa = 4.09 TRR1429 pKa = 11.84 VEE1431 pKa = 4.41 SVTKK1435 pKa = 10.35 AYY1437 pKa = 10.02 NVKK1440 pKa = 10.24 KK1441 pKa = 9.09 KK1442 pKa = 8.81 TVVRR1446 pKa = 11.84 AFRR1449 pKa = 11.84 DD1450 pKa = 3.43 LSAAYY1455 pKa = 9.55 HH1456 pKa = 5.59 EE1457 pKa = 4.56 RR1458 pKa = 11.84 AVRR1461 pKa = 11.84 HH1462 pKa = 5.16 AWKK1465 pKa = 10.42 GMSGLHH1471 pKa = 4.7 IVNRR1475 pKa = 11.84 IRR1477 pKa = 11.84 MGVSNLVMVVSKK1489 pKa = 10.85 INPAKK1494 pKa = 10.84 ANVLAKK1500 pKa = 10.67 SGDD1503 pKa = 3.65 PTKK1506 pKa = 10.36 WLAVLTT1512 pKa = 4.29
Molecular weight: 171.45 kDa
Isoelectric point according different methods:
IPC2.protein.svr19 7.11
IPC2_protein 7.571
IPC_protein 7.38
Toseland 7.205
ProMoST 7.951
Dawson 8.112
Bjellqvist 8.39
Wikipedia 8.053
Rodwell 8.141
Grimsley 7.307
Solomon 8.141
Lehninger 8.156
Nozaki 8.448
DTASelect 8.185
Thurlkill 8.244
EMBOSS 8.317
Sillero 8.507
Patrickios 4.228
IPC_peptide 8.141
IPC2_peptide 7.322
IPC2.peptide.svr19 7.534
Peptides (in silico digests for buttom-up proteomics)
Below you can find
in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.
Try ESI
ChTry ESI
ArgC ESI
LysN ESI
TryLysC ESI
Try MALDI
ChTry MALDI
ArgC MALDI
LysN MALDI
TryLysC MALDI
Try LTQ
ChTry LTQ
ArgC LTQ
LysN LTQ
TryLysC LTQ
Try MSlow
ChTry MSlow
ArgC MSlow
LysN MSlow
TryLysC MSlow
Try MShigh
ChTry MShigh
ArgC MShigh
LysN MShigh
TryLysC MShigh
General Statistics
Number of major isoforms
Number of additional isoforms
Number of all proteins
Number of amino acids
Min. Seq. Length
Max. Seq. Length
Avg. Seq. Length
Avg. Mol. Weight
2
0
2
2209
697
1512
1104.5
124.88
Amino acid frequency
Ala
Cys
Asp
Glu
Phe
Gly
His
Ile
Lys
Leu
7.922 ± 0.14
1.086 ± 0.045
6.564 ± 0.176
5.161 ± 0.081
3.938 ± 0.035
5.568 ± 0.221
2.082 ± 0.119
5.885 ± 0.077
5.115 ± 0.522
8.058 ± 0.301
Met
Asn
Gln
Pro
Arg
Ser
Thr
Val
Trp
Tyr
3.486 ± 0.291
5.478 ± 0.014
4.12 ± 0.807
2.807 ± 0.123
6.066 ± 0.493
6.745 ± 0.313
6.7 ± 0.29
6.971 ± 0.282
1.177 ± 0.094
5.07 ± 0.052
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level
Most of the basic statistics you can see at this page can be downloaded from this CSV file
For dipeptide frequency statistics click here