Opisthocomus hoazin (Hoatzin) (Phasianus hoazin)

Taxonomy: cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; Sauropsida; Sauria; Archelosauria; Archosauria; Dinosauria;

Average proteome isoelectric point is 6.8

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 12773 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A091X7Y6|A0A091X7Y6_OPIHO Small G protein signaling modulator 2 (Fragment) OS=Opisthocomus hoazin OX=30419 GN=N306_15615 PE=4 SV=1
SS1 pKa = 6.77RR2 pKa = 11.84LSWLEE7 pKa = 3.48KK8 pKa = 10.42SGVGFSLDD16 pKa = 3.46YY17 pKa = 9.24PTISLHH23 pKa = 6.08AVSRR27 pKa = 11.84DD28 pKa = 3.11LSAYY32 pKa = 8.42PCEE35 pKa = 4.18HH36 pKa = 7.0LYY38 pKa = 11.68VMVNAKK44 pKa = 10.31FEE46 pKa = 4.15EE47 pKa = 4.78EE48 pKa = 4.13EE49 pKa = 4.25TKK51 pKa = 10.06EE52 pKa = 3.96APMAEE57 pKa = 4.28GEE59 pKa = 4.22EE60 pKa = 4.57EE61 pKa = 4.21EE62 pKa = 6.05DD63 pKa = 4.02SDD65 pKa = 6.23DD66 pKa = 3.89DD67 pKa = 4.15VEE69 pKa = 5.15PIAEE73 pKa = 4.09FRR75 pKa = 11.84FVPSDD80 pKa = 3.33KK81 pKa = 10.82SALDD85 pKa = 3.45AMFSAMCEE93 pKa = 4.27CQALHH98 pKa = 7.41PDD100 pKa = 4.21PDD102 pKa = 5.77DD103 pKa = 4.05EE104 pKa = 7.61DD105 pKa = 4.46SDD107 pKa = 3.76NDD109 pKa = 3.97YY110 pKa = 11.37EE111 pKa = 4.59GEE113 pKa = 4.16EE114 pKa = 4.41YY115 pKa = 10.56DD116 pKa = 4.4VEE118 pKa = 4.23AHH120 pKa = 6.13EE121 pKa = 5.43LEE123 pKa = 4.54QGDD126 pKa = 3.63IPTFYY131 pKa = 10.0TYY133 pKa = 11.09EE134 pKa = 4.17EE135 pKa = 4.62GLSHH139 pKa = 6.9LTAEE143 pKa = 4.71GQATLEE149 pKa = 4.11RR150 pKa = 11.84LEE152 pKa = 4.74GMLAQSVSSQYY163 pKa = 11.66NMAGVRR169 pKa = 11.84TEE171 pKa = 3.7DD172 pKa = 3.58SIRR175 pKa = 11.84EE176 pKa = 4.1FEE178 pKa = 5.27DD179 pKa = 3.49GMEE182 pKa = 4.04VDD184 pKa = 3.86VAPVVAGQFEE194 pKa = 4.42DD195 pKa = 5.26AEE197 pKa = 4.32VDD199 pKa = 3.59HH200 pKa = 7.08

Molecular weight: 22.37 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A091VA41|A0A091VA41_OPIHO Tetratricopeptide repeat protein 38 (Fragment) OS=Opisthocomus hoazin OX=30419 GN=N306_08777 PE=3 SV=1
KKK2 pKa = 10.12RR3 pKa = 11.84QGKKK7 pKa = 8.85RR8 pKa = 11.84QGKKK12 pKa = 8.73RR13 pKa = 11.84QGKKK17 pKa = 8.73RR18 pKa = 11.84QGKKK22 pKa = 8.73RR23 pKa = 11.84QGKKK27 pKa = 8.73RR28 pKa = 11.84QGKKK32 pKa = 8.73RR33 pKa = 11.84QGKKK37 pKa = 8.63RR38 pKa = 11.84QGNSRR43 pKa = 11.84QGKKK47 pKa = 7.87RR48 pKa = 11.84KKK50 pKa = 9.33KKK52 pKa = 10.31RR53 pKa = 11.84

Molecular weight: 5.78 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

12773

0

12773

5377037

32

5562

421.0

47.34

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.422 ± 0.019

2.278 ± 0.018

5.06 ± 0.016

7.169 ± 0.028

3.964 ± 0.016

5.87 ± 0.029

2.541 ± 0.012

4.986 ± 0.016

6.502 ± 0.026

9.751 ± 0.033

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.238 ± 0.01

4.138 ± 0.014

5.147 ± 0.026

4.601 ± 0.02

5.284 ± 0.016

8.132 ± 0.03

5.352 ± 0.014

6.368 ± 0.019

1.21 ± 0.007

2.984 ± 0.012
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski