Oleomonas sp. K1W22B-8

Taxonomy: cellular organisms; Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Oleomonas; unclassified Oleomonas

Average proteome isoelectric point is 6.64

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 5024 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A418WDE3|A0A418WDE3_9PROT DNA topoisomerase 4 subunit A OS=Oleomonas sp. K1W22B-8 OX=2320859 GN=parC PE=3 SV=1
MM1 pKa = 7.63PAFAEE6 pKa = 4.39TFDD9 pKa = 5.02LADD12 pKa = 4.33LDD14 pKa = 4.44GEE16 pKa = 4.5NGFHH20 pKa = 6.52LVSEE24 pKa = 4.43AGSYY28 pKa = 10.19NFGYY32 pKa = 10.48SIATLGDD39 pKa = 3.49VNGDD43 pKa = 3.61GFDD46 pKa = 5.12DD47 pKa = 3.61IAVNSFDD54 pKa = 4.81GPTILLGGQGPFAPSTTVSNEE75 pKa = 3.65FPFEE79 pKa = 4.03TRR81 pKa = 11.84TATLPDD87 pKa = 4.53DD88 pKa = 3.68LTEE91 pKa = 4.16YY92 pKa = 10.44EE93 pKa = 4.23SWIVGIGDD101 pKa = 3.5VNGDD105 pKa = 3.33GFADD109 pKa = 4.07FDD111 pKa = 3.61HH112 pKa = 6.8HH113 pKa = 7.21AFYY116 pKa = 9.18ATEE119 pKa = 4.02TYY121 pKa = 10.64YY122 pKa = 10.61EE123 pKa = 4.13YY124 pKa = 10.46EE125 pKa = 4.47YY126 pKa = 11.1GDD128 pKa = 3.31SWTEE132 pKa = 3.96IFFHH136 pKa = 7.48DD137 pKa = 4.4YY138 pKa = 11.31GRR140 pKa = 11.84IQYY143 pKa = 10.26GGGSAATTGKK153 pKa = 10.44RR154 pKa = 11.84FGDD157 pKa = 3.56RR158 pKa = 11.84GLEE161 pKa = 4.06DD162 pKa = 4.68VDD164 pKa = 4.47PSWLVPLGDD173 pKa = 3.75VNGDD177 pKa = 3.42GFDD180 pKa = 3.74DD181 pKa = 3.89VVVYY185 pKa = 10.66VQDD188 pKa = 3.82GSHH191 pKa = 6.71PKK193 pKa = 10.13VVFGSATGLPDD204 pKa = 3.29NVNRR208 pKa = 11.84GSAPSLAFTGASPFEE223 pKa = 4.29INGAGDD229 pKa = 3.52VNGDD233 pKa = 4.0GITDD237 pKa = 3.69VVVGVSDD244 pKa = 3.52SSGVDD249 pKa = 2.95HH250 pKa = 6.11YY251 pKa = 11.63VVYY254 pKa = 10.61GGAGLAPGFFDD265 pKa = 4.64LTSLDD270 pKa = 3.39GTNGFKK276 pKa = 10.26LTDD279 pKa = 3.41ARR281 pKa = 11.84TVGTVGDD288 pKa = 3.79VDD290 pKa = 4.99GDD292 pKa = 4.01GLDD295 pKa = 4.0DD296 pKa = 4.78LVVSMSGRR304 pKa = 11.84TSSDD308 pKa = 2.7PYY310 pKa = 8.83YY311 pKa = 10.84VVYY314 pKa = 10.63GRR316 pKa = 11.84AAGPAAIDD324 pKa = 3.54ASAVDD329 pKa = 4.37GSDD332 pKa = 2.85GFQIVNAGTRR342 pKa = 11.84WVGRR346 pKa = 11.84AGDD349 pKa = 3.77INADD353 pKa = 3.63GLDD356 pKa = 4.16DD357 pKa = 4.54FLIGNDD363 pKa = 3.26YY364 pKa = 11.32VVFGRR369 pKa = 11.84ADD371 pKa = 3.21VGTGGLDD378 pKa = 3.19ATSVDD383 pKa = 3.97GDD385 pKa = 3.5NGFQIVATGIDD396 pKa = 3.87TTSSWGGLIVQAAGDD411 pKa = 3.93VNGDD415 pKa = 3.57GVDD418 pKa = 3.8DD419 pKa = 4.56LVAGTRR425 pKa = 11.84LEE427 pKa = 4.17NSVHH431 pKa = 6.23VILGHH436 pKa = 6.78AASAVNWVGTSARR449 pKa = 11.84EE450 pKa = 3.9NHH452 pKa = 6.48GGSPEE457 pKa = 3.97NDD459 pKa = 3.45VLNGAGGNDD468 pKa = 4.13YY469 pKa = 11.13LRR471 pKa = 11.84GWAVTTCC478 pKa = 3.65

Molecular weight: 49.45 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A418WTK9|A0A418WTK9_9PROT Uncharacterized protein OS=Oleomonas sp. K1W22B-8 OX=2320859 GN=D3874_01865 PE=4 SV=1
MM1 pKa = 7.93PSPSSRR7 pKa = 11.84KK8 pKa = 6.83PWRR11 pKa = 11.84WRR13 pKa = 11.84LSWRR17 pKa = 11.84KK18 pKa = 9.38SPPRR22 pKa = 11.84KK23 pKa = 9.29PPPRR27 pKa = 11.84PSRR30 pKa = 11.84RR31 pKa = 11.84PLTAARR37 pKa = 11.84RR38 pKa = 11.84RR39 pKa = 11.84SPVVNRR45 pKa = 11.84RR46 pKa = 11.84PKK48 pKa = 9.9VVRR51 pKa = 11.84PPPMPGAANRR61 pKa = 11.84FSVANRR67 pKa = 11.84RR68 pKa = 11.84RR69 pKa = 11.84SNGGPRR75 pKa = 11.84WRR77 pKa = 11.84SVGRR81 pKa = 11.84RR82 pKa = 11.84GPAANSNRR90 pKa = 11.84FNRR93 pKa = 11.84RR94 pKa = 11.84RR95 pKa = 11.84RR96 pKa = 11.84GLQAGDD102 pKa = 3.69PWVSPAGRR110 pKa = 11.84CRR112 pKa = 11.84HH113 pKa = 5.21KK114 pKa = 11.07SMRR117 pKa = 11.84KK118 pKa = 9.49DD119 pKa = 3.76FPRR122 pKa = 5.34

Molecular weight: 14.19 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

5024

0

5024

1531126

26

3535

304.8

32.79

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

13.388 ± 0.057

0.821 ± 0.011

5.925 ± 0.039

5.126 ± 0.032

3.647 ± 0.023

9.284 ± 0.055

1.984 ± 0.02

4.948 ± 0.024

2.906 ± 0.03

10.369 ± 0.04

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.26 ± 0.02

2.421 ± 0.025

5.437 ± 0.031

2.975 ± 0.017

7.206 ± 0.04

4.836 ± 0.028

5.356 ± 0.028

7.56 ± 0.03

1.357 ± 0.015

2.194 ± 0.02
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski