Torque teno mini virus ALA22

Taxonomy: Viruses; Anelloviridae; Betatorquevirus; Torque teno mini virus 27

Average proteome isoelectric point is 7.56

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 3 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A076V7U4|A0A076V7U4_9VIRU Uncharacterized protein OS=Torque teno mini virus ALA22 OX=1535290 GN=ALA22_gp1 PE=4 SV=1
MM1 pKa = 6.6TTRR4 pKa = 11.84IVPTKK9 pKa = 10.82DD10 pKa = 3.38SIRR13 pKa = 11.84QKK15 pKa = 10.24NLKK18 pKa = 8.25WMNLLVHH25 pKa = 6.09SHH27 pKa = 7.7DD28 pKa = 4.19IFCDD32 pKa = 3.54CDD34 pKa = 3.86SPLQHH39 pKa = 6.43TLILICQQEE48 pKa = 4.3PKK50 pKa = 10.12IEE52 pKa = 4.15LKK54 pKa = 10.6PIEE57 pKa = 4.24KK58 pKa = 10.39DD59 pKa = 3.17IIKK62 pKa = 10.25KK63 pKa = 10.31CLIGDD68 pKa = 3.75TTEE71 pKa = 4.14AAGDD75 pKa = 3.67PAEE78 pKa = 5.05DD79 pKa = 3.9GVEE82 pKa = 3.98EE83 pKa = 4.42GLLDD87 pKa = 4.3ALFKK91 pKa = 11.11EE92 pKa = 4.88DD93 pKa = 5.18FGEE96 pKa = 4.18EE97 pKa = 3.87DD98 pKa = 3.24TAGG101 pKa = 3.29

Molecular weight: 11.32 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A076V365|A0A076V365_9VIRU Capsid protein OS=Torque teno mini virus ALA22 OX=1535290 GN=ALA22_gp2 PE=3 SV=1
MM1 pKa = 7.56FFTLSLGEE9 pKa = 4.45HH10 pKa = 6.4HH11 pKa = 7.16LLWPLSQNQTNNQNIPLPITSSKK34 pKa = 10.49HH35 pKa = 3.73LRR37 pKa = 11.84CRR39 pKa = 11.84VQHH42 pKa = 6.41LPLNTSSTTSTKK54 pKa = 11.16DD55 pKa = 3.2EE56 pKa = 3.85VHH58 pKa = 5.99LQKK61 pKa = 11.09KK62 pKa = 8.8LLKK65 pKa = 10.12EE66 pKa = 4.09SQNTKK71 pKa = 10.26RR72 pKa = 11.84LNKK75 pKa = 10.12LFSRR79 pKa = 11.84LQNQLYY85 pKa = 8.78PATQHH90 pKa = 6.1PKK92 pKa = 9.95KK93 pKa = 10.13KK94 pKa = 9.61HH95 pKa = 4.56RR96 pKa = 11.84HH97 pKa = 4.21QKK99 pKa = 9.68HH100 pKa = 4.16RR101 pKa = 11.84TRR103 pKa = 11.84KK104 pKa = 9.36KK105 pKa = 10.1KK106 pKa = 9.84KK107 pKa = 7.61CHH109 pKa = 5.73SRR111 pKa = 11.84NSSSSSEE118 pKa = 4.13SSKK121 pKa = 11.12DD122 pKa = 3.43SSEE125 pKa = 4.39SEE127 pKa = 4.37STNSSTDD134 pKa = 2.76

Molecular weight: 15.52 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

3

0

3

909

101

674

303.0

35.34

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

3.63 ± 0.793

1.1 ± 0.877

4.4 ± 1.63

5.281 ± 1.211

4.07 ± 0.772

4.29 ± 0.974

2.97 ± 1.403

5.171 ± 1.282

8.361 ± 1.201

10.451 ± 0.536

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.76 ± 0.292

5.281 ± 0.855

5.831 ± 0.585

6.051 ± 0.544

6.051 ± 1.167

6.271 ± 3.066

10.451 ± 1.289

2.53 ± 0.286

1.98 ± 0.575

4.07 ± 1.887
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski