Maverick-related virus strain Spezl

Taxonomy: Viruses; Varidnaviria; Bamfordvirae; Preplasmiviricota; Maveriviricetes; Priklausovirales; Lavidaviridae; Mavirus; Cafeteriavirus-dependent mavirus

Average proteome isoelectric point is 7.8

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 20 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|F1DAT9|F1DAT9_9VIRU Putative major capsid protein OS=Maverick-related virus strain Spezl OX=1932931 GN=MV18 PE=4 SV=1
MM1 pKa = 7.22KK2 pKa = 10.29QYY4 pKa = 10.37IWLNEE9 pKa = 4.17TIKK12 pKa = 11.0SNKK15 pKa = 8.48QLAGPRR21 pKa = 11.84GSYY24 pKa = 9.41KK25 pKa = 10.44RR26 pKa = 11.84PVSVDD31 pKa = 2.56IFRR34 pKa = 11.84SSTILDD40 pKa = 3.48PDD42 pKa = 3.6KK43 pKa = 11.34NYY45 pKa = 11.07LLIVEE50 pKa = 4.93EE51 pKa = 4.12FHH53 pKa = 6.26LHH55 pKa = 7.51KK56 pKa = 10.38IRR58 pKa = 11.84LPLFKK63 pKa = 10.05PAGHH67 pKa = 7.61DD68 pKa = 3.54YY69 pKa = 10.85QVGIFNRR76 pKa = 11.84STDD79 pKa = 3.2EE80 pKa = 3.72IMGVRR85 pKa = 11.84EE86 pKa = 3.83VDD88 pKa = 3.93FSTFVDD94 pKa = 3.67EE95 pKa = 5.34DD96 pKa = 4.67GYY98 pKa = 10.96MYY100 pKa = 10.59DD101 pKa = 3.66YY102 pKa = 11.45VDD104 pKa = 3.52VGTAINEE111 pKa = 4.27TLAGLCDD118 pKa = 4.68GIIGEE123 pKa = 4.22EE124 pKa = 4.39DD125 pKa = 3.14IPVFSFNKK133 pKa = 9.24HH134 pKa = 4.26SKK136 pKa = 9.93KK137 pKa = 10.74FEE139 pKa = 3.67ITTTEE144 pKa = 3.8NFRR147 pKa = 11.84NGHH150 pKa = 6.69FIMFNDD156 pKa = 4.46DD157 pKa = 2.97MRR159 pKa = 11.84VDD161 pKa = 4.44FNSFEE166 pKa = 4.06FDD168 pKa = 5.44DD169 pKa = 3.98IDD171 pKa = 3.7EE172 pKa = 4.88EE173 pKa = 4.63YY174 pKa = 11.38SLVILNEE181 pKa = 4.08DD182 pKa = 4.28VEE184 pKa = 4.61TQDD187 pKa = 4.66ASTLEE192 pKa = 3.95FLTPISHH199 pKa = 7.26IVIEE203 pKa = 4.67SNDD206 pKa = 3.55LPVSYY211 pKa = 10.25EE212 pKa = 4.01LLPSISKK219 pKa = 8.38NTTISDD225 pKa = 3.51NTGVFLTNYY234 pKa = 10.32KK235 pKa = 10.24YY236 pKa = 10.67LQQNNQDD243 pKa = 3.57YY244 pKa = 11.1NSILFRR250 pKa = 11.84VEE252 pKa = 3.53NSSNKK257 pKa = 8.64YY258 pKa = 10.56HH259 pKa = 7.44NILQTNFNRR268 pKa = 11.84FNLSFTIYY276 pKa = 10.58DD277 pKa = 3.73YY278 pKa = 11.83DD279 pKa = 4.05NEE281 pKa = 4.27KK282 pKa = 10.89HH283 pKa = 6.58PLTLLPQTVIQLKK296 pKa = 10.59LLFEE300 pKa = 5.28SIDD303 pKa = 3.41

Molecular weight: 35.23 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|F1DAS9|F1DAS9_9VIRU Uncharacterized protein OS=Maverick-related virus strain Spezl OX=1932931 GN=MV08 PE=4 SV=1
MM1 pKa = 6.31THH3 pKa = 6.04KK4 pKa = 9.59TSKK7 pKa = 10.19NKK9 pKa = 10.23RR10 pKa = 11.84KK11 pKa = 9.91ASPIRR16 pKa = 11.84LMPRR20 pKa = 11.84NIYY23 pKa = 9.49QEE25 pKa = 3.88QKK27 pKa = 9.87AAAIIDD33 pKa = 3.54PEE35 pKa = 4.09EE36 pKa = 4.88RR37 pKa = 11.84YY38 pKa = 9.41EE39 pKa = 3.97ALKK42 pKa = 10.43KK43 pKa = 10.19IRR45 pKa = 11.84LTTDD49 pKa = 2.34QRR51 pKa = 11.84MTKK54 pKa = 10.45EE55 pKa = 4.04EE56 pKa = 4.0IKK58 pKa = 10.68KK59 pKa = 9.44LRR61 pKa = 11.84NMINSDD67 pKa = 4.25IIFMSS72 pKa = 3.64

Molecular weight: 8.59 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

20

0

20

5867

54

712

293.4

33.68

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

4.346 ± 0.591

0.972 ± 0.152

6.63 ± 0.233

6.835 ± 0.532

4.568 ± 0.303

5.13 ± 0.509

1.619 ± 0.165

6.784 ± 0.312

11.181 ± 0.838

9.357 ± 0.438

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.909 ± 0.236

7.346 ± 0.447

4.295 ± 0.461

3.665 ± 0.187

3.971 ± 0.269

6.017 ± 0.46

5.659 ± 0.424

4.943 ± 0.381

0.614 ± 0.084

4.159 ± 0.367
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski