Galleria mellonella (Greater wax moth)
Average proteome isoelectric point is 6.8
Get precalculated fractions of proteins
Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
All
Note: above files contain also dissociation constants (pKa)
Virtual 2D-PAGE plot for 18321 proteins (isoelectric point calculated using IPC2_protein)
Get csv file with sequences according to given criteria:
* You can choose from 21 different methods for calculating isoelectric point
Summary statistics related to proteome-wise predictions
Protein with the lowest isoelectric point:
>tr|A0A6J3C177|A0A6J3C177_GALME Endothelin-converting enzyme 1 OS=Galleria mellonella OX=7137 GN=LOC113519472 PE=3 SV=1
MM1 pKa = 7.4 EE2 pKa = 5.72 RR3 pKa = 11.84 NGSEE7 pKa = 3.85 RR8 pKa = 11.84 DD9 pKa = 3.64 VNDD12 pKa = 3.17 VEE14 pKa = 4.45 EE15 pKa = 4.18 WPEE18 pKa = 3.77 IYY20 pKa = 10.45 EE21 pKa = 4.61 DD22 pKa = 4.07 ANNMIDD28 pKa = 4.2 FDD30 pKa = 5.61 FDD32 pKa = 3.94 FDD34 pKa = 6.61 LINDD38 pKa = 4.35 DD39 pKa = 4.56 NLSNDD44 pKa = 2.63 TWQFFPEE51 pKa = 4.19 DD52 pKa = 4.48 LEE54 pKa = 5.23 NIDD57 pKa = 4.15 YY58 pKa = 11.31 NSLEE62 pKa = 4.56 NIDD65 pKa = 5.4 FIPAPEE71 pKa = 4.19 TGFSVDD77 pKa = 3.12 AVINRR82 pKa = 11.84 LEE84 pKa = 5.5 DD85 pKa = 2.98 ITQGMISLAGDD96 pKa = 3.69 FMQCIEE102 pKa = 4.68 EE103 pKa = 4.03 IRR105 pKa = 11.84 VFTAQQFGHH114 pKa = 6.53 FEE116 pKa = 3.99 QEE118 pKa = 4.13 QAWAQQAASVNANGEE133 pKa = 4.18 TMRR136 pKa = 11.84 CANCNRR142 pKa = 11.84 EE143 pKa = 3.99 ATAVCSLCRR152 pKa = 11.84 RR153 pKa = 11.84 TPYY156 pKa = 10.78 CSMYY160 pKa = 9.44 CQKK163 pKa = 10.39 RR164 pKa = 11.84 DD165 pKa = 3.27 WMSHH169 pKa = 6.61 HH170 pKa = 7.1 IDD172 pKa = 4.16 CLISMAIIEE181 pKa = 5.24 ADD183 pKa = 3.41 MQQDD187 pKa = 3.05 QWYY190 pKa = 9.15 GPPPDD195 pKa = 3.99 ALL197 pKa = 4.43
Molecular weight: 22.76 kDa
Isoelectric point according different methods:
IPC2.protein.svr19 3.723
IPC2_protein 3.795
IPC_protein 3.795
Toseland 3.579
ProMoST 3.948
Dawson 3.783
Bjellqvist 3.935
Wikipedia 3.694
Rodwell 3.617
Grimsley 3.49
Solomon 3.77
Lehninger 3.719
Nozaki 3.884
DTASelect 4.101
Thurlkill 3.63
EMBOSS 3.706
Sillero 3.91
Patrickios 0.846
IPC_peptide 3.77
IPC2_peptide 3.897
IPC2.peptide.svr19 3.813
Protein with the highest isoelectric point:
>tr|A0A6J3C110|A0A6J3C110_GALME zinc finger protein 501-like OS=Galleria mellonella OX=7137 GN=LOC113510080 PE=4 SV=1
MM1 pKa = 6.7 QHH3 pKa = 6.94 HH4 pKa = 7.11 LRR6 pKa = 11.84 LLHH9 pKa = 6.98 RR10 pKa = 11.84 IRR12 pKa = 11.84 LRR14 pKa = 11.84 GLHH17 pKa = 6.2 RR18 pKa = 11.84 PALALVGAARR28 pKa = 11.84 RR29 pKa = 11.84 HH30 pKa = 5.93 RR31 pKa = 11.84 GRR33 pKa = 11.84 GRR35 pKa = 11.84 HH36 pKa = 5.57 AGAARR41 pKa = 11.84 VADD44 pKa = 4.25 GARR47 pKa = 11.84 RR48 pKa = 11.84 AARR51 pKa = 11.84 RR52 pKa = 11.84 RR53 pKa = 11.84 ARR55 pKa = 11.84 LRR57 pKa = 11.84 RR58 pKa = 11.84 ARR60 pKa = 11.84 PRR62 pKa = 11.84 HH63 pKa = 5.71 LLLAQRR69 pKa = 11.84 AGAGAHH75 pKa = 5.55 DD76 pKa = 4.41 VRR78 pKa = 11.84 RR79 pKa = 11.84 AAARR83 pKa = 11.84 AAASRR88 pKa = 11.84 GRR90 pKa = 11.84 GRR92 pKa = 11.84 PAAAGAVPRR101 pKa = 11.84 RR102 pKa = 11.84 RR103 pKa = 11.84 GRR105 pKa = 11.84 GGVCARR111 pKa = 11.84 PPRR114 pKa = 11.84 RR115 pKa = 11.84 LHH117 pKa = 6.33 AQWPPPAPRR126 pKa = 11.84 NAQRR130 pKa = 11.84 QLPVPGAVPLRR141 pKa = 11.84 RR142 pKa = 11.84 VPGVRR147 pKa = 11.84 RR148 pKa = 11.84 RR149 pKa = 11.84 RR150 pKa = 11.84 GRR152 pKa = 11.84 GGGVARR158 pKa = 11.84 LHH160 pKa = 6.62 AGAAVRR166 pKa = 11.84 LPVPVGRR173 pKa = 11.84 PRR175 pKa = 11.84 EE176 pKa = 3.96 RR177 pKa = 11.84 LPGGVPHH184 pKa = 7.54 RR185 pKa = 11.84 LQPVAPRR192 pKa = 11.84 IPAAVLSHH200 pKa = 6.03 RR201 pKa = 11.84 TRR203 pKa = 3.89
Molecular weight: 22.12 kDa
Isoelectric point according different methods:
IPC2.protein.svr19 9.517
IPC2_protein 11.199
IPC_protein 12.822
Toseland 12.983
ProMoST 13.481
Dawson 12.983
Bjellqvist 12.983
Wikipedia 13.466
Rodwell 12.486
Grimsley 13.027
Solomon 13.481
Lehninger 13.378
Nozaki 12.983
DTASelect 12.983
Thurlkill 12.983
EMBOSS 13.481
Sillero 12.983
Patrickios 12.193
IPC_peptide 13.481
IPC2_peptide 12.471
IPC2.peptide.svr19 9.211
Peptides (in silico digests for buttom-up proteomics)
Below you can find
in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.
Try ESI
ChTry ESI
ArgC ESI
LysN ESI
TryLysC ESI
Try MALDI
ChTry MALDI
ArgC MALDI
LysN MALDI
TryLysC MALDI
Try LTQ
ChTry LTQ
ArgC LTQ
LysN LTQ
TryLysC LTQ
Try MSlow
ChTry MSlow
ArgC MSlow
LysN MSlow
TryLysC MSlow
Try MShigh
ChTry MShigh
ArgC MShigh
LysN MShigh
TryLysC MShigh
General Statistics
Number of major isoforms
Number of additional isoforms
Number of all proteins
Number of amino acids
Min. Seq. Length
Max. Seq. Length
Avg. Seq. Length
Avg. Mol. Weight
14085
4236
18321
9854621
21
17500
537.9
60.37
Amino acid frequency
Ala
Cys
Asp
Glu
Phe
Gly
His
Ile
Lys
Leu
6.881 ± 0.022
1.941 ± 0.029
5.537 ± 0.014
6.75 ± 0.025
3.45 ± 0.014
5.55 ± 0.024
2.507 ± 0.011
5.451 ± 0.016
6.436 ± 0.027
8.917 ± 0.026
Met
Asn
Gln
Pro
Arg
Ser
Thr
Val
Trp
Tyr
2.199 ± 0.009
4.994 ± 0.02
5.489 ± 0.026
4.061 ± 0.018
5.634 ± 0.018
7.868 ± 0.026
5.847 ± 0.018
6.204 ± 0.015
1.069 ± 0.006
3.195 ± 0.012
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level
Most of the basic statistics you can see at this page can be downloaded from this CSV file
For dipeptide frequency statistics click here