Tunisvirus fontaine2
Average proteome isoelectric point is 6.93
Get precalculated fractions of proteins
Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
All
Note: above files contain also dissociation constants (pKa)
Virtual 2D-PAGE plot for 484 proteins (isoelectric point calculated using IPC2_protein)
Get csv file with sequences according to given criteria:
* You can choose from 21 different methods for calculating isoelectric point
Summary statistics related to proteome-wise predictions
Protein with the lowest isoelectric point:
>tr|V9SEF3|V9SEF3_9VIRU Uncharacterized protein OS=Tunisvirus fontaine2 OX=1421067 GN=TNS_ORF377 PE=4 SV=1
MM1 pKa = 7.43 SFQVISSTSLNIIPGTFYY19 pKa = 11.47 NLGEE23 pKa = 4.25 LMEE26 pKa = 4.46 VMNQQTVGDD35 pKa = 4.02 DD36 pKa = 3.69 SEE38 pKa = 4.45 MPEE41 pKa = 4.43 LVDD44 pKa = 4.35 VPNEE48 pKa = 4.08 DD49 pKa = 4.71 GYY51 pKa = 11.87 VADD54 pKa = 5.43 DD55 pKa = 4.85 GEE57 pKa = 4.28 FADD60 pKa = 5.83 DD61 pKa = 4.27 EE62 pKa = 4.43 EE63 pKa = 5.76 ALGGPHH69 pKa = 7.16 LEE71 pKa = 4.1 ALRR74 pKa = 11.84 TQIFQLFGHH83 pKa = 6.37 DD84 pKa = 2.99 EE85 pKa = 4.42 CFNNLCPCGEE95 pKa = 4.0 CDD97 pKa = 3.68 EE98 pKa = 5.22 YY99 pKa = 11.27 KK100 pKa = 10.69 GQPLVYY106 pKa = 9.76 HH107 pKa = 6.69 KK108 pKa = 11.04 AKK110 pKa = 9.72 FDD112 pKa = 3.52 HH113 pKa = 6.94 SITVEE118 pKa = 4.04 DD119 pKa = 4.29 FSEE122 pKa = 4.41 YY123 pKa = 11.11 SLFEE127 pKa = 3.88 RR128 pKa = 11.84 TDD130 pKa = 3.37 YY131 pKa = 11.08 FF132 pKa = 4.66
Molecular weight: 14.95 kDa
Isoelectric point according different methods:
IPC2.protein.svr19 3.812
IPC2_protein 3.846
IPC_protein 3.808
Toseland 3.617
ProMoST 3.961
Dawson 3.783
Bjellqvist 3.948
Wikipedia 3.694
Rodwell 3.643
Grimsley 3.528
Solomon 3.77
Lehninger 3.732
Nozaki 3.91
DTASelect 4.075
Thurlkill 3.656
EMBOSS 3.706
Sillero 3.935
Patrickios 0.401
IPC_peptide 3.77
IPC2_peptide 3.91
IPC2.peptide.svr19 3.831
Protein with the highest isoelectric point:
>tr|V9SED1|V9SED1_9VIRU Uncharacterized protein OS=Tunisvirus fontaine2 OX=1421067 GN=TNS_ORF372 PE=4 SV=1
MM1 pKa = 6.72 QHH3 pKa = 6.59 LVNPEE8 pKa = 3.65 TGRR11 pKa = 11.84 NILRR15 pKa = 11.84 NGPTHH20 pKa = 7.3 LSLLRR25 pKa = 11.84 RR26 pKa = 11.84 GIIPKK31 pKa = 9.58 EE32 pKa = 4.01 KK33 pKa = 9.91 PLEE36 pKa = 4.06 RR37 pKa = 11.84 TKK39 pKa = 10.97 KK40 pKa = 8.71 GTLPGASNVSKK51 pKa = 10.86 YY52 pKa = 10.44 KK53 pKa = 10.39 KK54 pKa = 9.42 EE55 pKa = 3.93 HH56 pKa = 6.27 LKK58 pKa = 11.1 SSDD61 pKa = 3.17 FCGTVPGSFPVNSKK75 pKa = 9.71 GRR77 pKa = 11.84 ARR79 pKa = 11.84 AALAYY84 pKa = 9.86 ARR86 pKa = 11.84 NDD88 pKa = 3.12 MHH90 pKa = 6.95 PEE92 pKa = 3.71 RR93 pKa = 11.84 VRR95 pKa = 11.84 ACARR99 pKa = 11.84 AKK101 pKa = 10.43 AKK103 pKa = 10.65 RR104 pKa = 11.84 EE105 pKa = 3.75 GWFF108 pKa = 3.3
Molecular weight: 12.06 kDa
Isoelectric point according different methods:
IPC2.protein.svr19 9.313
IPC2_protein 9.809
IPC_protein 10.584
Toseland 11.067
ProMoST 10.789
Dawson 11.111
Bjellqvist 10.818
Wikipedia 11.33
Rodwell 11.389
Grimsley 11.14
Solomon 11.286
Lehninger 11.257
Nozaki 11.038
DTASelect 10.818
Thurlkill 11.038
EMBOSS 11.477
Sillero 11.052
Patrickios 11.125
IPC_peptide 11.301
IPC2_peptide 9.809
IPC2.peptide.svr19 8.642
Peptides (in silico digests for buttom-up proteomics)
Below you can find
in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.
Try ESI
ChTry ESI
ArgC ESI
LysN ESI
TryLysC ESI
Try MALDI
ChTry MALDI
ArgC MALDI
LysN MALDI
TryLysC MALDI
Try LTQ
ChTry LTQ
ArgC LTQ
LysN LTQ
TryLysC LTQ
Try MSlow
ChTry MSlow
ArgC MSlow
LysN MSlow
TryLysC MSlow
Try MShigh
ChTry MShigh
ArgC MShigh
LysN MShigh
TryLysC MShigh
General Statistics
Number of major isoforms
Number of additional isoforms
Number of all proteins
Number of amino acids
Min. Seq. Length
Max. Seq. Length
Avg. Seq. Length
Avg. Mol. Weight
484
0
484
112932
46
1651
233.3
26.72
Amino acid frequency
Ala
Cys
Asp
Glu
Phe
Gly
His
Ile
Lys
Leu
5.026 ± 0.105
2.469 ± 0.075
4.929 ± 0.076
8.544 ± 0.141
5.573 ± 0.093
6.091 ± 0.122
1.886 ± 0.062
5.095 ± 0.075
8.816 ± 0.168
8.903 ± 0.113
Met
Asn
Gln
Pro
Arg
Ser
Thr
Val
Trp
Tyr
2.109 ± 0.048
4.024 ± 0.075
3.858 ± 0.08
3.295 ± 0.079
5.502 ± 0.091
7.361 ± 0.092
5.139 ± 0.125
6.58 ± 0.086
1.495 ± 0.043
3.306 ± 0.065
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level
Most of the basic statistics you can see at this page can be downloaded from this CSV file
For dipeptide frequency statistics click here