Mucinivorans hirudinis

Taxonomy: cellular organisms; Bacteria; FCB group; Bacteroidetes/Chlorobi group; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Mucinivorans

Average proteome isoelectric point is 6.68

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2816 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A060RDV4|A0A060RDV4_9BACT BACON domain-containing protein OS=Mucinivorans hirudinis OX=1433126 GN=BN938_2076 PE=4 SV=1
MM1 pKa = 7.21YY2 pKa = 8.93EE3 pKa = 4.31AYY5 pKa = 10.57YY6 pKa = 11.31ADD8 pKa = 3.92AEE10 pKa = 4.24RR11 pKa = 11.84LAVLSGAKK19 pKa = 8.59STIVDD24 pKa = 4.14EE25 pKa = 4.6VPTFYY30 pKa = 11.13VAFEE34 pKa = 5.13DD35 pKa = 4.45ISVLMDD41 pKa = 3.98RR42 pKa = 11.84LSKK45 pKa = 11.03ADD47 pKa = 3.39VAVCISEE54 pKa = 4.22MQDD57 pKa = 2.63SDD59 pKa = 4.28GNFVPTINYY68 pKa = 9.65EE69 pKa = 4.03EE70 pKa = 4.37EE71 pKa = 3.97

Molecular weight: 7.94 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A060R6D5|A0A060R6D5_9BACT HNHc domain-containing protein OS=Mucinivorans hirudinis OX=1433126 GN=BN938_0387 PE=4 SV=1
MM1 pKa = 7.11FTTTLSILKK10 pKa = 8.63TAFRR14 pKa = 11.84EE15 pKa = 4.47SINCSRR21 pKa = 11.84NGYY24 pKa = 9.8QMANKK29 pKa = 8.89KK30 pKa = 10.18RR31 pKa = 11.84KK32 pKa = 9.15IGRR35 pKa = 11.84FSTWRR40 pKa = 11.84YY41 pKa = 8.01LALVGVTWLPYY52 pKa = 9.89RR53 pKa = 11.84CGSDD57 pKa = 2.77RR58 pKa = 4.07

Molecular weight: 6.79 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2816

0

2816

879195

37

2204

312.2

35.12

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

7.552 ± 0.047

1.118 ± 0.017

5.358 ± 0.031

6.567 ± 0.043

4.597 ± 0.029

6.798 ± 0.04

1.676 ± 0.02

7.441 ± 0.038

6.4 ± 0.045

8.903 ± 0.037

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.584 ± 0.019

5.038 ± 0.04

3.508 ± 0.023

3.439 ± 0.027

5.129 ± 0.032

6.344 ± 0.036

5.497 ± 0.03

6.783 ± 0.036

1.16 ± 0.017

4.106 ± 0.033
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski