Streptococcus satellite phage Javan98

Taxonomy: Viruses; unclassified bacterial viruses

Average proteome isoelectric point is 6.77

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 18 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A4D5ZXY8|A0A4D5ZXY8_9VIRU PriCT_1 domain-containing protein OS=Streptococcus satellite phage Javan98 OX=2558870 GN=JavanS98_0010 PE=4 SV=1
MM1 pKa = 7.39LVTYY5 pKa = 8.27PALFYY10 pKa = 11.35YY11 pKa = 10.56DD12 pKa = 3.96DD13 pKa = 4.12TDD15 pKa = 3.96GASAPYY21 pKa = 9.78FVTFPDD27 pKa = 4.61FEE29 pKa = 5.3HH30 pKa = 7.07SATQGEE36 pKa = 4.5DD37 pKa = 3.05MADD40 pKa = 3.49AMATASDD47 pKa = 3.3WLGIHH52 pKa = 6.56LADD55 pKa = 4.36YY56 pKa = 10.61IEE58 pKa = 4.46NGRR61 pKa = 11.84DD62 pKa = 3.13IPTPSPINALSLADD76 pKa = 3.93NNPFRR81 pKa = 11.84DD82 pKa = 3.87DD83 pKa = 3.58KK84 pKa = 11.4DD85 pKa = 3.43IEE87 pKa = 4.32LVYY90 pKa = 10.75DD91 pKa = 3.98PSKK94 pKa = 11.15SFVSMVMVDD103 pKa = 3.2VAEE106 pKa = 4.14YY107 pKa = 10.49LGSQEE112 pKa = 4.15PVKK115 pKa = 10.18KK116 pKa = 9.12TLTIPRR122 pKa = 11.84WADD125 pKa = 3.13TLGRR129 pKa = 11.84EE130 pKa = 4.01LGLNFSQTLTDD141 pKa = 5.45AIADD145 pKa = 4.03KK146 pKa = 10.56KK147 pKa = 10.31IHH149 pKa = 5.92AA150 pKa = 5.0

Molecular weight: 16.61 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A4D5ZX38|A0A4D5ZX38_9VIRU DNA primase OS=Streptococcus satellite phage Javan98 OX=2558870 GN=JavanS98_0011 PE=4 SV=1
MM1 pKa = 7.88KK2 pKa = 9.33ITEE5 pKa = 4.22VKK7 pKa = 9.98KK8 pKa = 10.55KK9 pKa = 10.47NGTIVYY15 pKa = 8.89RR16 pKa = 11.84ASVYY20 pKa = 10.8LGTDD24 pKa = 2.67QVTGKK29 pKa = 10.21RR30 pKa = 11.84SKK32 pKa = 9.72TSVTGRR38 pKa = 11.84TRR40 pKa = 11.84KK41 pKa = 7.44EE42 pKa = 3.81TRR44 pKa = 11.84QKK46 pKa = 11.17AKK48 pKa = 10.05QAQDD52 pKa = 3.96DD53 pKa = 4.72FISNGYY59 pKa = 7.36TVTKK63 pKa = 9.88VVPIKK68 pKa = 10.68NYY70 pKa = 10.3QEE72 pKa = 5.37LADD75 pKa = 4.72LWLEE79 pKa = 4.3SYY81 pKa = 10.85QLTVKK86 pKa = 9.85PQTFIATKK94 pKa = 10.24RR95 pKa = 11.84MLYY98 pKa = 10.01NHH100 pKa = 7.89LIPVFGALRR109 pKa = 11.84LNKK112 pKa = 10.24LSVSYY117 pKa = 10.64IQGFINDD124 pKa = 4.15LSTEE128 pKa = 4.11LVHH131 pKa = 6.53YY132 pKa = 10.39SVVHH136 pKa = 5.68SINRR140 pKa = 11.84RR141 pKa = 11.84VLQYY145 pKa = 10.88GVSLQLLPFNPARR158 pKa = 11.84DD159 pKa = 3.75VILPKK164 pKa = 10.39VPKK167 pKa = 9.96KK168 pKa = 10.18KK169 pKa = 10.44NKK171 pKa = 9.56AIKK174 pKa = 10.2FIAPEE179 pKa = 3.98DD180 pKa = 3.77LKK182 pKa = 11.69ALMTYY187 pKa = 7.83MEE189 pKa = 4.71KK190 pKa = 10.62LANKK194 pKa = 9.07KK195 pKa = 9.8FSYY198 pKa = 10.51FFDD201 pKa = 3.67YY202 pKa = 11.08VLYY205 pKa = 10.68SVLLATGCRR214 pKa = 11.84FGEE217 pKa = 4.58VVALEE222 pKa = 4.21WSDD225 pKa = 3.54IDD227 pKa = 5.07LDD229 pKa = 3.95NGTISITKK237 pKa = 9.93NYY239 pKa = 10.09SRR241 pKa = 11.84LLKK244 pKa = 10.89LIGTPKK250 pKa = 9.91SKK252 pKa = 10.87AGVRR256 pKa = 11.84VISIDD261 pKa = 3.23KK262 pKa = 9.23KK263 pKa = 9.18TINLLRR269 pKa = 11.84LYY271 pKa = 10.67KK272 pKa = 10.3NRR274 pKa = 11.84QRR276 pKa = 11.84QLFIEE281 pKa = 4.43TGARR285 pKa = 11.84VSSVVFATPLKK296 pKa = 9.8EE297 pKa = 4.13YY298 pKa = 10.98QNMATRR304 pKa = 11.84QEE306 pKa = 4.26SLDD309 pKa = 3.65RR310 pKa = 11.84RR311 pKa = 11.84CAEE314 pKa = 3.47IAIPRR319 pKa = 11.84FTFHH323 pKa = 7.69AFRR326 pKa = 11.84HH327 pKa = 4.69THH329 pKa = 6.92ASLLLNAGISYY340 pKa = 10.68KK341 pKa = 10.23EE342 pKa = 3.61LQYY345 pKa = 11.49RR346 pKa = 11.84LGHH349 pKa = 6.19ATLAMTMDD357 pKa = 3.88IYY359 pKa = 11.81GHH361 pKa = 6.44LSKK364 pKa = 11.0DD365 pKa = 3.39KK366 pKa = 10.39EE367 pKa = 4.28KK368 pKa = 10.93EE369 pKa = 3.85AVSYY373 pKa = 9.5YY374 pKa = 10.62EE375 pKa = 4.12KK376 pKa = 10.7AINSLL381 pKa = 3.57

Molecular weight: 43.6 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

18

0

18

2835

60

507

157.5

18.08

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

5.679 ± 0.655

0.776 ± 0.218

5.538 ± 0.522

7.372 ± 0.569

3.386 ± 0.31

5.291 ± 0.414

1.799 ± 0.245

7.16 ± 0.4

9.101 ± 0.634

10.864 ± 0.435

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.257 ± 0.223

4.938 ± 0.484

4.162 ± 0.481

4.374 ± 0.507

4.938 ± 0.517

5.326 ± 0.432

6.455 ± 0.386

4.974 ± 0.485

0.917 ± 0.164

4.691 ± 0.494
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski