Mola mola (Ocean sunfish) (Tetraodon mola)
Average proteome isoelectric point is 6.7
Get precalculated fractions of proteins
Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
All
Note: above files contain also dissociation constants (pKa)
Virtual 2D-PAGE plot for 28963 proteins (isoelectric point calculated using IPC2_protein)
Get csv file with sequences according to given criteria:
* You can choose from 21 different methods for calculating isoelectric point
Summary statistics related to proteome-wise predictions
Protein with the lowest isoelectric point:
>tr|A0A3Q3W7H1|A0A3Q3W7H1_MOLML Uncharacterized protein OS=Mola mola OX=94237 PE=4 SV=1
MM1 pKa = 7.7 EE2 pKa = 5.35 DD3 pKa = 4.17 AEE5 pKa = 4.52 TEE7 pKa = 4.25 LAVTEE12 pKa = 4.23 PDD14 pKa = 3.18 ALGADD19 pKa = 5.39 FITVEE24 pKa = 5.27 LDD26 pKa = 3.4 TQPIEE31 pKa = 4.73 YY32 pKa = 8.85 VVKK35 pKa = 9.05 WAEE38 pKa = 4.01 VGSKK42 pKa = 7.6 FTISCVKK49 pKa = 10.18 KK50 pKa = 10.8 DD51 pKa = 3.54 SDD53 pKa = 4.69 DD54 pKa = 3.84 ATEE57 pKa = 4.07 LTADD61 pKa = 3.51 QLKK64 pKa = 10.39 IEE66 pKa = 4.1 TDD68 pKa = 3.38 EE69 pKa = 5.28 AFFAPYY75 pKa = 10.42 EE76 pKa = 4.01 EE77 pKa = 5.08 VYY79 pKa = 10.04 PCEE82 pKa = 4.03 VTEE85 pKa = 3.93 QSVEE89 pKa = 3.85 IKK91 pKa = 9.84 TDD93 pKa = 3.24 SDD95 pKa = 3.34 EE96 pKa = 4.82 DD97 pKa = 3.9 EE98 pKa = 4.61 EE99 pKa = 6.22 DD100 pKa = 3.84 IEE102 pKa = 5.44 DD103 pKa = 3.8 EE104 pKa = 4.54 QEE106 pKa = 4.22 VLVEE110 pKa = 4.5 AGSSQLDD117 pKa = 3.76 GEE119 pKa = 4.57 VDD121 pKa = 3.16 SDD123 pKa = 3.98 TADD126 pKa = 3.58 FEE128 pKa = 4.87 PDD130 pKa = 2.76 EE131 pKa = 4.21 RR132 pKa = 11.84 QYY134 pKa = 11.39 RR135 pKa = 11.84 CSYY138 pKa = 10.16 CGKK141 pKa = 9.16 CYY143 pKa = 10.75 SHH145 pKa = 7.04 ASSLYY150 pKa = 9.5 RR151 pKa = 11.84 HH152 pKa = 5.7 QQTHH156 pKa = 4.78
Molecular weight: 17.6 kDa
Isoelectric point according different methods:
IPC2.protein.svr19 3.716
IPC2_protein 3.795
IPC_protein 3.77
Toseland 3.579
ProMoST 3.91
Dawson 3.745
Bjellqvist 3.897
Wikipedia 3.643
Rodwell 3.605
Grimsley 3.49
Solomon 3.732
Lehninger 3.694
Nozaki 3.859
DTASelect 4.024
Thurlkill 3.617
EMBOSS 3.656
Sillero 3.884
Patrickios 1.125
IPC_peptide 3.732
IPC2_peptide 3.872
IPC2.peptide.svr19 3.799
Protein with the highest isoelectric point:
>tr|A0A3Q4BC77|A0A3Q4BC77_MOLML AKT1 substrate 1 (proline-rich) OS=Mola mola OX=94237 PE=4 SV=1
MM1 pKa = 6.96 VQTPTHH7 pKa = 6.38 PPIHH11 pKa = 6.64 PSIHH15 pKa = 6.47 PSIHH19 pKa = 6.42 PSIHH23 pKa = 6.42 PSIHH27 pKa = 6.42 PSIHH31 pKa = 6.42 PSIHH35 pKa = 6.42 PSIHH39 pKa = 6.42 PSIHH43 pKa = 6.42 PSIHH47 pKa = 6.61 PSILPPRR54 pKa = 11.84 PTRR57 pKa = 11.84 GSSPPPTLFAGVPLQPQLIWSSSVAVRR84 pKa = 11.84 MSVTRR89 pKa = 11.84 PVPMVLFPSLKK100 pKa = 9.16 VNLWPFSRR108 pKa = 11.84 TIGWRR113 pKa = 11.84 SVSVKK118 pKa = 10.1 VVSSPGITISS128 pKa = 3.25
Molecular weight: 13.9 kDa
Isoelectric point according different methods:
IPC2.protein.svr19 9.441
IPC2_protein 10.95
IPC_protein 12.544
Toseland 12.705
ProMoST 13.203
Dawson 12.705
Bjellqvist 12.705
Wikipedia 13.188
Rodwell 12.34
Grimsley 12.749
Solomon 13.203
Lehninger 13.1
Nozaki 12.705
DTASelect 12.705
Thurlkill 12.705
EMBOSS 13.203
Sillero 12.705
Patrickios 12.106
IPC_peptide 13.203
IPC2_peptide 12.193
IPC2.peptide.svr19 9.106
Peptides (in silico digests for buttom-up proteomics)
Below you can find
in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.
Try ESI
ChTry ESI
ArgC ESI
LysN ESI
TryLysC ESI
Try MALDI
ChTry MALDI
ArgC MALDI
LysN MALDI
TryLysC MALDI
Try LTQ
ChTry LTQ
ArgC LTQ
LysN LTQ
TryLysC LTQ
Try MSlow
ChTry MSlow
ArgC MSlow
LysN MSlow
TryLysC MSlow
Try MShigh
ChTry MShigh
ArgC MShigh
LysN MShigh
TryLysC MShigh
General Statistics
Number of major isoforms
Number of additional isoforms
Number of all proteins
Number of amino acids
Min. Seq. Length
Max. Seq. Length
Avg. Seq. Length
Avg. Mol. Weight
21362
7601
28963
14064223
9
6187
485.6
54.25
Amino acid frequency
Ala
Cys
Asp
Glu
Phe
Gly
His
Ile
Lys
Leu
6.451 ± 0.013
2.446 ± 0.015
5.062 ± 0.011
6.493 ± 0.018
3.901 ± 0.011
6.276 ± 0.02
2.704 ± 0.008
4.609 ± 0.011
5.495 ± 0.016
9.831 ± 0.018
Met
Asn
Gln
Pro
Arg
Ser
Thr
Val
Trp
Tyr
2.418 ± 0.005
3.89 ± 0.008
5.392 ± 0.017
4.574 ± 0.013
5.625 ± 0.01
8.431 ± 0.017
5.562 ± 0.011
6.527 ± 0.013
1.231 ± 0.005
2.897 ± 0.008
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level
Most of the basic statistics you can see at this page can be downloaded from this CSV file
For dipeptide frequency statistics click here