Pteropox virus

Taxonomy: Viruses; Varidnaviria; Bamfordvirae; Nucleocytoviricota; Pokkesviricetes; Chitovirales; Poxviridae; Chordopoxvirinae; Pteropopoxvirus

Average proteome isoelectric point is 6.88

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 143 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A1B1MR96|A0A1B1MR96_9POXV S-s bond formation pathway protein OS=Pteropox virus OX=1873698 GN=PTPV-Aus-017 PE=4 SV=1
MM1 pKa = 7.23MAQILNFVSNRR12 pKa = 11.84FYY14 pKa = 10.93YY15 pKa = 10.53DD16 pKa = 2.86RR17 pKa = 11.84GNFEE21 pKa = 5.45LEE23 pKa = 3.88IQEE26 pKa = 5.24GILDD30 pKa = 4.39LARR33 pKa = 11.84SIEE36 pKa = 4.1AVANLPRR43 pKa = 11.84QEE45 pKa = 4.12GAVRR49 pKa = 11.84TIHH52 pKa = 6.08GDD54 pKa = 3.23EE55 pKa = 4.25YY56 pKa = 11.27FVIEE60 pKa = 3.9TARR63 pKa = 11.84RR64 pKa = 11.84QNGDD68 pKa = 3.3RR69 pKa = 11.84EE70 pKa = 4.33EE71 pKa = 4.23NNQQILQPDD80 pKa = 3.73NQFDD84 pKa = 3.9NLDD87 pKa = 3.86GNVEE91 pKa = 4.01IPLVQQNQQPVQPVLLPPPNQLVDD115 pKa = 4.2DD116 pKa = 4.58VQDD119 pKa = 3.72QADD122 pKa = 4.22SPMLAQSSNHH132 pKa = 5.74MNTQEE137 pKa = 4.48DD138 pKa = 4.6VLSSDD143 pKa = 3.75MLNLFDD149 pKa = 6.27DD150 pKa = 4.68IEE152 pKa = 4.38WNDD155 pKa = 3.44EE156 pKa = 4.37FIQQVLNNPEE166 pKa = 4.21TIFPISEE173 pKa = 4.37FDD175 pKa = 3.64PNMDD179 pKa = 3.32ISCYY183 pKa = 10.64EE184 pKa = 4.18NLDD187 pKa = 3.84DD188 pKa = 4.74MM189 pKa = 5.96

Molecular weight: 21.79 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A1B1MRA8|A0A1B1MRA8_9POXV Serine/threonine-protein kinase OS=Pteropox virus OX=1873698 GN=PTPV-Aus-018 PE=3 SV=1
MM1 pKa = 7.69NKK3 pKa = 9.93RR4 pKa = 11.84KK5 pKa = 9.7LLTMIRR11 pKa = 11.84FSIKK15 pKa = 10.38LLNTNYY21 pKa = 10.65SDD23 pKa = 4.04VLCGKK28 pKa = 10.2YY29 pKa = 9.99SLKK32 pKa = 10.79SVLPRR37 pKa = 11.84IKK39 pKa = 10.39KK40 pKa = 10.39KK41 pKa = 10.58LVCKK45 pKa = 9.27YY46 pKa = 7.53TAQMCNGSEE55 pKa = 3.51SWYY58 pKa = 10.6YY59 pKa = 10.24IVLSLFKK66 pKa = 10.48FVEE69 pKa = 4.06LRR71 pKa = 11.84KK72 pKa = 10.08HH73 pKa = 6.1ISCVNCDD80 pKa = 3.33KK81 pKa = 10.84KK82 pKa = 11.12LSPRR86 pKa = 11.84EE87 pKa = 3.79FASLVNKK94 pKa = 9.78CVQFLNVYY102 pKa = 10.22DD103 pKa = 4.4RR104 pKa = 11.84YY105 pKa = 11.1LL106 pKa = 4.86

Molecular weight: 12.53 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

143

0

143

42641

46

1286

298.2

34.1

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

4.491 ± 0.138

2.23 ± 0.095

5.57 ± 0.124

5.75 ± 0.233

5.077 ± 0.15

3.443 ± 0.131

1.834 ± 0.091

8.178 ± 0.195

8.142 ± 0.213

9.242 ± 0.191

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.387 ± 0.09

6.843 ± 0.153

3.654 ± 0.165

2.584 ± 0.097

3.612 ± 0.12

8.203 ± 0.151

6.351 ± 0.16

7.103 ± 0.134

0.657 ± 0.045

4.648 ± 0.138
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski