Torque teno canis virus

Taxonomy: Viruses; Anelloviridae; Thetatorquevirus; Torque teno canid virus 1

Average proteome isoelectric point is 6.93

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 3 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|G3C8H8|G3C8H8_9VIRU Capsid protein OS=Torque teno canis virus OX=687385 PE=3 SV=1
MM1 pKa = 7.57SDD3 pKa = 2.63EE4 pKa = 4.75GYY6 pKa = 10.41RR7 pKa = 11.84EE8 pKa = 4.04LVEE11 pKa = 4.77SKK13 pKa = 10.44SAPTTPGPWSPDD25 pKa = 2.9RR26 pKa = 11.84EE27 pKa = 3.57RR28 pKa = 11.84WKK30 pKa = 10.28RR31 pKa = 11.84HH32 pKa = 3.24EE33 pKa = 4.37AAWKK37 pKa = 7.37QHH39 pKa = 5.74CSWSHH44 pKa = 5.69GLWCHH49 pKa = 5.39CHH51 pKa = 7.11DD52 pKa = 3.66WTQHH56 pKa = 4.64LKK58 pKa = 10.31KK59 pKa = 9.93ATRR62 pKa = 11.84EE63 pKa = 4.18CGSGTEE69 pKa = 4.19SGEE72 pKa = 4.15DD73 pKa = 3.35PAVSFDD79 pKa = 4.32LVDD82 pKa = 4.22DD83 pKa = 4.49AAMLAAAGDD92 pKa = 4.32AEE94 pKa = 4.55PGAAGGGG101 pKa = 3.61

Molecular weight: 10.99 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|G3C8H8|G3C8H8_9VIRU Capsid protein OS=Torque teno canis virus OX=687385 PE=3 SV=1
MM1 pKa = 7.92RR2 pKa = 11.84FRR4 pKa = 11.84YY5 pKa = 9.76RR6 pKa = 11.84KK7 pKa = 7.31WRR9 pKa = 11.84RR10 pKa = 11.84PRR12 pKa = 11.84RR13 pKa = 11.84LFRR16 pKa = 11.84SRR18 pKa = 11.84RR19 pKa = 11.84RR20 pKa = 11.84RR21 pKa = 11.84GYY23 pKa = 10.34ARR25 pKa = 11.84RR26 pKa = 11.84RR27 pKa = 11.84WRR29 pKa = 11.84RR30 pKa = 11.84RR31 pKa = 11.84AWGRR35 pKa = 11.84RR36 pKa = 11.84RR37 pKa = 11.84RR38 pKa = 11.84VRR40 pKa = 11.84RR41 pKa = 11.84YY42 pKa = 7.93RR43 pKa = 11.84RR44 pKa = 11.84RR45 pKa = 11.84RR46 pKa = 11.84GGTKK50 pKa = 9.07RR51 pKa = 11.84QYY53 pKa = 10.34ISSIMQWNPQHH64 pKa = 7.07RR65 pKa = 11.84HH66 pKa = 3.87LCYY69 pKa = 10.24IKK71 pKa = 10.86GITWLCAARR80 pKa = 11.84ADD82 pKa = 4.68RR83 pKa = 11.84ISWPGIRR90 pKa = 11.84QIAATDD96 pKa = 3.41STRR99 pKa = 11.84YY100 pKa = 8.78WSTILVGGCGVLTLSMDD117 pKa = 3.09WFFFEE122 pKa = 4.04NLRR125 pKa = 11.84WRR127 pKa = 11.84NRR129 pKa = 11.84WSHH132 pKa = 6.36SNVGYY137 pKa = 10.86DD138 pKa = 3.4LARR141 pKa = 11.84YY142 pKa = 7.71MGTHH146 pKa = 7.33LYY148 pKa = 9.91FPPLADD154 pKa = 2.03IWYY157 pKa = 9.26IVWTDD162 pKa = 3.43TEE164 pKa = 5.41FVDD167 pKa = 4.53QPKK170 pKa = 10.55KK171 pKa = 10.28VMSYY175 pKa = 5.46THH177 pKa = 6.41PWILLMTKK185 pKa = 8.25KK186 pKa = 10.13HH187 pKa = 5.76KK188 pKa = 10.36VIKK191 pKa = 8.33PRR193 pKa = 11.84KK194 pKa = 7.5WNGKK198 pKa = 6.79GKK200 pKa = 10.51KK201 pKa = 9.28IFLKK205 pKa = 10.49PPAVFNSAWYY215 pKa = 10.09APGKK219 pKa = 8.97WCGAGLGRR227 pKa = 11.84IYY229 pKa = 10.67FSFINPFKK237 pKa = 10.83QIMHH241 pKa = 7.09TGQTEE246 pKa = 3.74QSFPFAIEE254 pKa = 4.46LGNTDD259 pKa = 3.5YY260 pKa = 11.55DD261 pKa = 3.59KK262 pKa = 11.33PPNNKK267 pKa = 9.35YY268 pKa = 10.41DD269 pKa = 3.98FKK271 pKa = 11.06NTDD274 pKa = 2.45IVKK277 pKa = 9.95QVWTAKK283 pKa = 10.1DD284 pKa = 3.11KK285 pKa = 10.5KK286 pKa = 8.87YY287 pKa = 10.53HH288 pKa = 5.98YY289 pKa = 10.0RR290 pKa = 11.84ADD292 pKa = 3.25WGTGDD297 pKa = 4.26GNAIMLPNTLSPTTPASWLLLEE319 pKa = 4.34WDD321 pKa = 3.47APYY324 pKa = 10.31WLWFWGKK331 pKa = 8.15TYY333 pKa = 10.92QDD335 pKa = 4.09FVSSHH340 pKa = 5.0TPEE343 pKa = 4.19GNQYY347 pKa = 10.33YY348 pKa = 9.59GQIYY352 pKa = 8.03VKK354 pKa = 9.12WWPITNPYY362 pKa = 9.63DD363 pKa = 3.99QGPHH367 pKa = 6.68TYY369 pKa = 10.23PEE371 pKa = 4.3DD372 pKa = 4.14KK373 pKa = 10.21EE374 pKa = 4.31WCLVMLDD381 pKa = 3.93PQPNFMTCNSIAAALKK397 pKa = 8.99IAQFGPCVYY406 pKa = 10.65SSTDD410 pKa = 3.45LQQSQIPINIPMYY423 pKa = 10.61YY424 pKa = 9.78LSKK427 pKa = 8.67WQWGGSTQGTSTHH440 pKa = 6.59IDD442 pKa = 3.38NPCNPRR448 pKa = 11.84PRR450 pKa = 11.84SIQIADD456 pKa = 3.84PASAPRR462 pKa = 11.84DD463 pKa = 3.83VIHH466 pKa = 6.85PWDD469 pKa = 3.62VDD471 pKa = 3.36ASGTISTAKK480 pKa = 10.24LKK482 pKa = 10.77RR483 pKa = 11.84LMEE486 pKa = 4.28GLGYY490 pKa = 10.16RR491 pKa = 11.84EE492 pKa = 4.9PKK494 pKa = 9.43PKK496 pKa = 10.01PGPPEE501 pKa = 3.73TLIPPGAPTPEE512 pKa = 3.94LDD514 pKa = 3.82YY515 pKa = 11.33YY516 pKa = 11.39SSEE519 pKa = 4.28TEE521 pKa = 4.02SDD523 pKa = 3.98DD524 pKa = 4.61FDD526 pKa = 3.97TGDD529 pKa = 3.66SEE531 pKa = 5.41EE532 pKa = 4.56EE533 pKa = 4.31EE534 pKa = 4.96EE535 pKa = 4.74DD536 pKa = 3.53HH537 pKa = 7.4QDD539 pKa = 3.48PRR541 pKa = 11.84WVRR544 pKa = 11.84EE545 pKa = 4.07SLDD548 pKa = 3.13KK549 pKa = 10.3LTRR552 pKa = 11.84RR553 pKa = 11.84LRR555 pKa = 11.84GEE557 pKa = 3.6RR558 pKa = 11.84RR559 pKa = 11.84QRR561 pKa = 11.84QQLGKK566 pKa = 10.88GLLALLKK573 pKa = 10.5DD574 pKa = 4.0KK575 pKa = 10.97KK576 pKa = 10.92

Molecular weight: 67.97 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

3

0

3

920

101

576

306.7

35.39

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.63 ± 1.882

1.848 ± 0.628

6.304 ± 0.502

5.217 ± 1.537

2.609 ± 0.802

7.5 ± 1.005

2.717 ± 0.886

3.587 ± 1.82

5.652 ± 0.68

6.522 ± 0.437

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.065 ± 0.025

2.609 ± 0.925

7.935 ± 0.589

3.804 ± 0.608

9.13 ± 1.121

7.174 ± 1.283

6.848 ± 0.845

3.043 ± 0.072

4.891 ± 0.457

3.913 ± 1.253
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski