Xylona heveae (strain CBS 132557 / TC161)

Taxonomy: cellular organisms; Eukaryota; Opisthokonta; Fungi; Dikarya; Ascomycota; saccharomyceta; Pezizomycotina; leotiomyceta; Xylonomycetes; Xylonales; Xylonaceae; Xylona; Xylona heveae

Average proteome isoelectric point is 6.69

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 8201 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A164Z8C9|A0A164Z8C9_XYLHT L-allo-threonine aldolase OS=Xylona heveae (strain CBS 132557 / TC161) OX=1328760 GN=L228DRAFT_215671 PE=3 SV=1
CC1 pKa = 7.43PFWCKK6 pKa = 10.29VDD8 pKa = 4.16LSGTLAVFACGAVRR22 pKa = 11.84AGGFEE27 pKa = 3.92LAEE30 pKa = 4.07AAGADD35 pKa = 4.04DD36 pKa = 3.87QGKK39 pKa = 7.25TATPDD44 pKa = 3.07ATSIPLTAEE53 pKa = 3.42QDD55 pKa = 2.94IYY57 pKa = 11.72AAFLNQHH64 pKa = 6.6RR65 pKa = 11.84YY66 pKa = 9.79DD67 pKa = 4.44LNPEE71 pKa = 3.75NDD73 pKa = 3.79LEE75 pKa = 4.4GTEE78 pKa = 4.4TLDD81 pKa = 3.91EE82 pKa = 4.27QPLNN86 pKa = 3.79

Molecular weight: 9.16 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A165GTR4|A0A165GTR4_XYLHT Kinase-like protein OS=Xylona heveae (strain CBS 132557 / TC161) OX=1328760 GN=L228DRAFT_267977 PE=4 SV=1
MM1 pKa = 7.82RR2 pKa = 11.84ISSQSHH8 pKa = 3.49KK9 pKa = 8.84TFRR12 pKa = 11.84TKK14 pKa = 10.46QKK16 pKa = 9.86LAKK19 pKa = 9.55AQKK22 pKa = 8.59QNRR25 pKa = 11.84PIPQWIRR32 pKa = 11.84LRR34 pKa = 11.84TGNTIGYY41 pKa = 6.85NAKK44 pKa = 9.45RR45 pKa = 11.84RR46 pKa = 11.84HH47 pKa = 4.21WRR49 pKa = 11.84KK50 pKa = 7.51TRR52 pKa = 11.84LGLL55 pKa = 4.09

Molecular weight: 6.64 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

8201

0

8201

4004401

49

5603

488.3

53.97

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

8.621 ± 0.022

1.147 ± 0.01

5.55 ± 0.02

6.365 ± 0.028

3.736 ± 0.018

6.832 ± 0.024

2.441 ± 0.012

4.837 ± 0.019

4.86 ± 0.023

8.908 ± 0.027

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.003 ± 0.01

3.693 ± 0.012

6.199 ± 0.033

4.089 ± 0.018

6.311 ± 0.022

8.89 ± 0.031

5.728 ± 0.02

5.814 ± 0.018

1.325 ± 0.01

2.65 ± 0.012
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski