Chrysochromulina parva virophage Curly

Taxonomy: Viruses; Varidnaviria; Bamfordvirae; Preplasmiviricota; Maveriviricetes; Priklausovirales; Lavidaviridae; unclassified Lavidaviridae

Average proteome isoelectric point is 6.44

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 19 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A499SAG3|A0A499SAG3_9VIRU S3H helicase with TVpol domain OS=Chrysochromulina parva virophage Curly OX=2420054 PE=4 SV=1
MM1 pKa = 7.12PQNGLSMFDD10 pKa = 3.56YY11 pKa = 10.55YY12 pKa = 10.49ISIGINPYY20 pKa = 10.39SIGAIGFAGGGGGALAANSVSSSNIVDD47 pKa = 3.85GTVEE51 pKa = 4.27TVDD54 pKa = 4.08LADD57 pKa = 5.66GIITEE62 pKa = 4.7AKK64 pKa = 9.82FHH66 pKa = 6.5PTLQTSLATFSQSLFNLEE84 pKa = 3.95NPGFYY89 pKa = 9.38GTLRR93 pKa = 11.84IKK95 pKa = 10.75NSNTSNVGATMTITVQSEE113 pKa = 5.02YY114 pKa = 11.33YY115 pKa = 10.0DD116 pKa = 4.02APSNTTDD123 pKa = 3.96IIPRR127 pKa = 11.84LTTTTLNRR135 pKa = 11.84GNHH138 pKa = 5.67IDD140 pKa = 3.24IVIPISTRR148 pKa = 11.84LTNKK152 pKa = 10.24DD153 pKa = 3.5SIFRR157 pKa = 11.84MYY159 pKa = 9.51YY160 pKa = 8.47TLNFGALAEE169 pKa = 4.17HH170 pKa = 6.83SNVNVNVDD178 pKa = 4.33EE179 pKa = 5.0ISTNAIGDD187 pKa = 3.87FVTFGTAKK195 pKa = 9.52TYY197 pKa = 11.17AVINGGSVEE206 pKa = 3.95ISFEE210 pKa = 3.88ISS212 pKa = 2.66

Molecular weight: 22.59 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A4P1LUE2|A0A4P1LUE2_9VIRU Uncharacterized protein OS=Chrysochromulina parva virophage Curly OX=2420054 PE=4 SV=1
MM1 pKa = 6.82VAKK4 pKa = 10.73FEE6 pKa = 4.44DD7 pKa = 4.06PKK9 pKa = 10.32RR10 pKa = 11.84TVHH13 pKa = 6.91FGMKK17 pKa = 10.31GSTTYY22 pKa = 10.57IDD24 pKa = 4.77DD25 pKa = 4.75KK26 pKa = 11.68DD27 pKa = 3.59PARR30 pKa = 11.84QKK32 pKa = 11.2AYY34 pKa = 10.79LDD36 pKa = 3.15RR37 pKa = 11.84HH38 pKa = 6.2RR39 pKa = 11.84EE40 pKa = 3.89NEE42 pKa = 3.85TWNNPTSPGSLARR55 pKa = 11.84YY56 pKa = 8.92ILWGDD61 pKa = 3.45STSLKK66 pKa = 10.74KK67 pKa = 10.72NISAFKK73 pKa = 10.65KK74 pKa = 10.37RR75 pKa = 11.84FNLL78 pKa = 3.73

Molecular weight: 9.08 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

19

0

19

6666

78

2106

350.8

39.22

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

7.696 ± 1.272

0.96 ± 0.378

5.866 ± 0.251

6.706 ± 0.532

3.705 ± 0.394

5.161 ± 0.451

1.53 ± 0.248

7.381 ± 0.493

7.306 ± 0.727

7.666 ± 0.402

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.475 ± 0.231

6.511 ± 0.829

5.746 ± 0.837

3.525 ± 0.393

4.275 ± 0.263

6.646 ± 0.341

6.751 ± 0.568

5.761 ± 0.211

0.525 ± 0.113

3.81 ± 0.482
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski