Limosilactobacillus ingluviei

Taxonomy: cellular organisms; Bacteria; Terrabacteria group; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Limosilactobacillus

Average proteome isoelectric point is 6.76

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 1922 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A0R2H309|A0A0R2H309_9LACO Phosphoribosylformylglycinamidine synthase subunit PurQ OS=Limosilactobacillus ingluviei OX=148604 GN=purQ PE=3 SV=1
MM1 pKa = 7.57KK2 pKa = 10.67NMTKK6 pKa = 10.42AVVVFATITGNNEE19 pKa = 3.57DD20 pKa = 3.99VADD23 pKa = 5.73LITDD27 pKa = 3.64ALEE30 pKa = 4.2NLGVDD35 pKa = 3.5VDD37 pKa = 4.02EE38 pKa = 6.17KK39 pKa = 10.61EE40 pKa = 3.66ITMADD45 pKa = 3.23VADD48 pKa = 5.12FEE50 pKa = 5.24DD51 pKa = 4.9ADD53 pKa = 3.72ICVVCPYY60 pKa = 10.11TYY62 pKa = 10.79DD63 pKa = 3.34EE64 pKa = 4.73GALPEE69 pKa = 4.65EE70 pKa = 4.81GLDD73 pKa = 4.23FYY75 pKa = 11.78DD76 pKa = 4.92DD77 pKa = 4.18LKK79 pKa = 11.39EE80 pKa = 4.3ADD82 pKa = 4.53LSGKK86 pKa = 9.92IYY88 pKa = 10.56GVAGSGDD95 pKa = 3.41TFYY98 pKa = 11.67ADD100 pKa = 3.8DD101 pKa = 3.73YY102 pKa = 11.26CRR104 pKa = 11.84AVDD107 pKa = 3.8DD108 pKa = 4.96FGAAFEE114 pKa = 4.74SAGATKK120 pKa = 10.16GAEE123 pKa = 4.08YY124 pKa = 10.97VHH126 pKa = 7.08IDD128 pKa = 4.18LAPEE132 pKa = 4.48GDD134 pKa = 5.07DD135 pKa = 5.09VDD137 pKa = 4.18TLDD140 pKa = 4.78AFAASLVEE148 pKa = 4.09KK149 pKa = 10.68AVGKK153 pKa = 10.36

Molecular weight: 16.26 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A0R2H5T5|A0A0R2H5T5_9LACO Glycerol dehydrogenase OS=Limosilactobacillus ingluviei OX=148604 GN=IV41_GL001825 PE=3 SV=1
MM1 pKa = 6.82QVKK4 pKa = 8.57VHH6 pKa = 6.19QRR8 pKa = 11.84AQVNQPQQAQANRR21 pKa = 11.84HH22 pKa = 4.57QRR24 pKa = 11.84VQAKK28 pKa = 8.77VRR30 pKa = 11.84QRR32 pKa = 11.84VPVNRR37 pKa = 11.84HH38 pKa = 4.02QRR40 pKa = 11.84VQAKK44 pKa = 7.02VHH46 pKa = 5.2QRR48 pKa = 11.84AQVKK52 pKa = 9.32VRR54 pKa = 11.84QQVPANPLLLAPANRR69 pKa = 11.84LQQAQVNRR77 pKa = 11.84LQQVQVNRR85 pKa = 11.84PQRR88 pKa = 11.84AQVNPLQQAQVNQLLLVQANRR109 pKa = 11.84LQRR112 pKa = 11.84AQVV115 pKa = 3.05

Molecular weight: 13.36 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

1922

0

1922

587619

43

2429

305.7

33.75

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

10.523 ± 0.09

0.523 ± 0.016

5.299 ± 0.068

5.089 ± 0.06

3.884 ± 0.038

6.89 ± 0.053

2.37 ± 0.027

5.57 ± 0.053

5.276 ± 0.064

10.484 ± 0.088

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.51 ± 0.026

4.002 ± 0.044

4.142 ± 0.036

5.592 ± 0.062

4.468 ± 0.044

4.875 ± 0.09

6.366 ± 0.05

7.402 ± 0.046

1.158 ± 0.024

3.438 ± 0.037
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski