Meleagris gallopavo (Wild turkey)

Taxonomy: cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; Sauropsida; Sauria; Archelosauria; Archosauria; Dinosauria;

Average proteome isoelectric point is 6.6

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 16533 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|G1NFC5|G1NFC5_MELGA Tripartite motif containing 55 OS=Meleagris gallopavo OX=9103 GN=TRIM55 PE=4 SV=2
MM1 pKa = 7.52AVFHH5 pKa = 7.31DD6 pKa = 4.18EE7 pKa = 4.41VEE9 pKa = 4.39IEE11 pKa = 4.0DD12 pKa = 3.93FEE14 pKa = 4.87YY15 pKa = 11.07DD16 pKa = 4.0EE17 pKa = 4.26EE18 pKa = 4.86TEE20 pKa = 4.5TYY22 pKa = 10.31SYY24 pKa = 10.49PCPCGDD30 pKa = 3.17RR31 pKa = 11.84FLITRR36 pKa = 11.84EE37 pKa = 3.86DD38 pKa = 3.83LEE40 pKa = 4.55NGEE43 pKa = 5.51DD44 pKa = 3.76VATCPSCSLILRR56 pKa = 11.84VIYY59 pKa = 10.21DD60 pKa = 3.18QEE62 pKa = 4.01QFMRR66 pKa = 11.84DD67 pKa = 3.31EE68 pKa = 4.88VIAEE72 pKa = 3.93PLTNKK77 pKa = 10.13EE78 pKa = 4.0LVKK81 pKa = 10.96CC82 pKa = 4.18

Molecular weight: 9.59 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|H9H0M2|H9H0M2_MELGA Uncharacterized protein OS=Meleagris gallopavo OX=9103 PE=4 SV=1
KKK2 pKa = 9.31RR3 pKa = 11.84SRR5 pKa = 11.84SRR7 pKa = 11.84SRR9 pKa = 11.84SRR11 pKa = 11.84SRR13 pKa = 11.84GRR15 pKa = 11.84RR16 pKa = 11.84YYY18 pKa = 9.62RR19 pKa = 11.84SRR21 pKa = 11.84SRR23 pKa = 11.84SRR25 pKa = 11.84GRR27 pKa = 11.84RR28 pKa = 11.84SRR30 pKa = 11.84SASYYY35 pKa = 9.96RR36 pKa = 11.84SRR38 pKa = 11.84SVSPRR43 pKa = 11.84RR44 pKa = 11.84SRR46 pKa = 11.84SISPRR51 pKa = 11.84RR52 pKa = 11.84SRR54 pKa = 11.84SGSLKKK60 pKa = 9.79SRR62 pKa = 11.84SRR64 pKa = 11.84SRR66 pKa = 11.84SRR68 pKa = 11.84SRR70 pKa = 11.84SRR72 pKa = 11.84SVTWPRR78 pKa = 11.84SSRR81 pKa = 11.84SKKK84 pKa = 10.75RR85 pKa = 11.84SPSPKKK91 pKa = 9.03SRR93 pKa = 11.84SPSGSP

Molecular weight: 11.58 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

14164

2369

16533

8776270

19

8404

530.8

59.5

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.556 ± 0.019

2.301 ± 0.015

4.972 ± 0.012

7.227 ± 0.026

3.808 ± 0.014

5.947 ± 0.025

2.534 ± 0.009

4.869 ± 0.015

6.316 ± 0.023

9.708 ± 0.022

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.213 ± 0.008

4.063 ± 0.012

5.392 ± 0.022

4.758 ± 0.018

5.263 ± 0.013

8.385 ± 0.023

5.372 ± 0.014

6.202 ± 0.015

1.18 ± 0.007

2.902 ± 0.011
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski