Aeromonas virus 25

Taxonomy: Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Tulanevirus

Average proteome isoelectric point is 6.31

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 242 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|Q19CT6|Q19CT6_9CAUD Uncharacterized protein OS=Aeromonas virus 25 OX=233894 GN=PHG25ORF080c PE=4 SV=1
MM1 pKa = 7.12KK2 pKa = 10.08HH3 pKa = 5.44VNEE6 pKa = 4.4MPKK9 pKa = 9.92NGQFVVVWVYY19 pKa = 11.06DD20 pKa = 3.54GKK22 pKa = 10.54IWSEE26 pKa = 3.49TWRR29 pKa = 11.84WNDD32 pKa = 3.07GVVEE36 pKa = 4.12ILLDD40 pKa = 3.55DD41 pKa = 4.0TAAEE45 pKa = 4.09EE46 pKa = 4.34WRR48 pKa = 11.84TNDD51 pKa = 3.33CYY53 pKa = 11.55YY54 pKa = 11.29DD55 pKa = 4.33DD56 pKa = 5.33GYY58 pKa = 11.71EE59 pKa = 4.08DD60 pKa = 5.57LEE62 pKa = 4.54LNYY65 pKa = 10.03IVII68 pKa = 4.43

Molecular weight: 8.19 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|Q19CR8|Q19CR8_9CAUD Site-specific RNase OS=Aeromonas virus 25 OX=233894 GN=regB PE=4 SV=1
MM1 pKa = 7.06MPEE4 pKa = 3.85NLMLLRR10 pKa = 11.84APGGRR15 pKa = 11.84TRR17 pKa = 11.84RR18 pKa = 11.84PRR20 pKa = 11.84EE21 pKa = 3.62LVKK24 pKa = 10.6FLSLWNNIGPRR35 pKa = 11.84KK36 pKa = 8.25TIGVTKK42 pKa = 9.71EE43 pKa = 3.86QVPEE47 pKa = 3.94EE48 pKa = 4.04QLTEE52 pKa = 3.88EE53 pKa = 3.92QKK55 pKa = 10.25IRR57 pKa = 11.84RR58 pKa = 11.84KK59 pKa = 9.6RR60 pKa = 11.84QEE62 pKa = 4.03LLRR65 pKa = 11.84SIYY68 pKa = 10.89

Molecular weight: 8.13 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

242

0

242

49627

19

1305

205.1

23.21

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

7.02 ± 0.205

1.159 ± 0.067

6.222 ± 0.116

6.777 ± 0.202

4.504 ± 0.131

6.319 ± 0.204

2.019 ± 0.094

7.115 ± 0.136

6.839 ± 0.231

7.216 ± 0.129

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.974 ± 0.102

5.541 ± 0.148

3.577 ± 0.1

3.413 ± 0.102

4.802 ± 0.11

6.66 ± 0.174

5.767 ± 0.237

6.613 ± 0.127

1.427 ± 0.07

4.036 ± 0.123
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski