Anaerotruncus sp. 1XD22-93

Taxonomy: cellular organisms; Bacteria; Terrabacteria group; Firmicutes; Clostridia; Eubacteriales; Oscillospiraceae; Anaerotruncus; unclassified Anaerotruncus

Average proteome isoelectric point is 6.29

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 6934 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A3A9H7Q3|A0A3A9H7Q3_9FIRM Uncharacterized protein OS=Anaerotruncus sp. 1XD22-93 OX=2320082 GN=D7Y41_35365 PE=4 SV=1
GG1 pKa = 6.97GPSGGGGGSSGSWEE15 pKa = 4.5IPPKK19 pKa = 10.38DD20 pKa = 3.83DD21 pKa = 3.52NGIYY25 pKa = 10.04KK26 pKa = 10.07GWHH29 pKa = 6.06LFDD32 pKa = 4.86PFDD35 pKa = 4.7YY36 pKa = 11.06DD37 pKa = 3.53FTPADD42 pKa = 3.23SDD44 pKa = 4.13YY45 pKa = 11.38NYY47 pKa = 11.17DD48 pKa = 3.68PLEE51 pKa = 4.25EE52 pKa = 4.46FDD54 pKa = 4.72PSGLHH59 pKa = 6.62IPLDD63 pKa = 4.24FPAPDD68 pKa = 5.47DD69 pKa = 3.65IDD71 pKa = 3.66YY72 pKa = 9.03TNPFWVPEE80 pKa = 3.83WAKK83 pKa = 11.25NKK85 pKa = 10.12DD86 pKa = 3.17

Molecular weight: 9.57 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A3A9I2M5|A0A3A9I2M5_9FIRM Conjugal transfer protein OS=Anaerotruncus sp. 1XD22-93 OX=2320082 GN=D7Y41_26070 PE=4 SV=1
MM1 pKa = 7.67KK2 pKa = 8.72MTFQPKK8 pKa = 9.06KK9 pKa = 8.03RR10 pKa = 11.84SRR12 pKa = 11.84SKK14 pKa = 9.44VHH16 pKa = 6.17GFRR19 pKa = 11.84ARR21 pKa = 11.84MSTKK25 pKa = 10.15GGRR28 pKa = 11.84KK29 pKa = 8.78VLAARR34 pKa = 11.84RR35 pKa = 11.84AKK37 pKa = 9.92GRR39 pKa = 11.84KK40 pKa = 8.91RR41 pKa = 11.84LSAA44 pKa = 3.96

Molecular weight: 5.06 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

6934

0

6934

2116876

24

7708

305.3

34.07

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

8.343 ± 0.033

1.527 ± 0.014

5.466 ± 0.026

7.536 ± 0.037

3.965 ± 0.024

7.497 ± 0.03

1.688 ± 0.013

6.358 ± 0.032

6.151 ± 0.032

9.099 ± 0.035

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.867 ± 0.016

3.924 ± 0.022

3.723 ± 0.023

3.559 ± 0.019

5.29 ± 0.033

5.992 ± 0.031

5.314 ± 0.027

6.848 ± 0.026

0.975 ± 0.011

3.879 ± 0.026
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski