Arcobacter sp. CECT 8987

Taxonomy: cellular organisms; Bacteria; Proteobacteria; delta/epsilon subdivisions; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Arcobacter group; unclassified Arcobacter group

Average proteome isoelectric point is 6.39

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2486 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    

Protein with the lowest isoelectric point:
>tr|A0A4Q0XQN1|A0A4Q0XQN1_9PROT Uncharacterized protein OS=Arcobacter sp. CECT 8987 OX=2044504 GN=CRV04_06160 PE=4 SV=1
MM1 pKa = 7.67AEE3 pKa = 4.54SIAKK7 pKa = 8.93VQSLLGKK14 pKa = 9.84FYY16 pKa = 11.11AQDD19 pKa = 2.98EE20 pKa = 4.73SGNVRR25 pKa = 11.84VLKK28 pKa = 11.02VGDD31 pKa = 3.75TIYY34 pKa = 10.57QGEE37 pKa = 4.57KK38 pKa = 10.47VYY40 pKa = 11.35GDD42 pKa = 3.7AANNSSDD49 pKa = 3.21KK50 pKa = 11.09LQIVSDD56 pKa = 3.83TQEE59 pKa = 4.0TFDD62 pKa = 3.63ITGSDD67 pKa = 3.36SLVFDD72 pKa = 4.23TSTNEE77 pKa = 3.58ATFGNEE83 pKa = 2.93EE84 pKa = 4.07VAFNPNSAWMPTADD98 pKa = 3.42NATVPEE104 pKa = 4.79GEE106 pKa = 4.68TVTDD110 pKa = 3.71AQGDD114 pKa = 3.65ITEE117 pKa = 4.65EE118 pKa = 3.63EE119 pKa = 4.11TAAGNEE125 pKa = 4.17AASSSDD131 pKa = 2.99VGVFNFEE138 pKa = 3.97NRR140 pKa = 11.84DD141 pKa = 3.35GDD143 pKa = 4.25SVNIQSDD150 pKa = 3.27LRR152 pKa = 11.84EE153 pKa = 4.19SVFSNNSDD161 pKa = 3.28SLVSNNGDD169 pKa = 3.43GLNSNPSSNLLLNGTPTPDD188 pKa = 3.65DD189 pKa = 4.12VNDD192 pKa = 3.52VPVAVDD198 pKa = 4.61DD199 pKa = 5.16SFTLDD204 pKa = 3.21EE205 pKa = 4.74DD206 pKa = 3.78ASYY209 pKa = 10.33TGTVATNDD217 pKa = 3.75TLSGDD222 pKa = 3.79GGNTFAVSGNPAHH235 pKa = 6.48GTVTMNADD243 pKa = 3.29GTFTYY248 pKa = 10.36TPAADD253 pKa = 3.69YY254 pKa = 11.27NGADD258 pKa = 3.29SFTYY262 pKa = 10.12TITDD266 pKa = 3.42ADD268 pKa = 4.5GDD270 pKa = 4.11TSTATVNLTVSSVNDD285 pKa = 3.27VPVAVTDD292 pKa = 4.25SINVSEE298 pKa = 4.59EE299 pKa = 3.69GLTNGIGDD307 pKa = 4.16TNGTPTDD314 pKa = 3.77TTNSNSVVGQLTIHH328 pKa = 6.31NPDD331 pKa = 3.33NDD333 pKa = 3.93ALTITLNAPTDD344 pKa = 3.87SLSSGNEE351 pKa = 3.89TIVWSGNNTHH361 pKa = 6.2EE362 pKa = 5.18LIGKK366 pKa = 9.57VGDD369 pKa = 3.7TEE371 pKa = 4.4VIKK374 pKa = 10.68IAIADD379 pKa = 4.0DD380 pKa = 3.82GSYY383 pKa = 10.99SVTLLDD389 pKa = 5.11PVDD392 pKa = 4.31HH393 pKa = 7.16PMNDD397 pKa = 3.2VEE399 pKa = 6.34DD400 pKa = 3.68ILSFNVGVNISDD412 pKa = 4.29GEE414 pKa = 4.38SSSSSTITVNIEE426 pKa = 3.58DD427 pKa = 4.71DD428 pKa = 3.9MPTVEE433 pKa = 4.48TSTTVWTEE441 pKa = 3.5ATSIPDD447 pKa = 3.05IFTGQVSFAGSSANQSRR464 pKa = 11.84FVFANGAVLVTGKK477 pKa = 10.7GFTSDD482 pKa = 3.35TDD484 pKa = 3.63LTLIDD489 pKa = 4.77ADD491 pKa = 4.72LNQSSGGLGVASDD504 pKa = 3.78EE505 pKa = 4.65SPYY508 pKa = 11.0HH509 pKa = 5.72NLANEE514 pKa = 3.64VDD516 pKa = 4.14FRR518 pKa = 11.84KK519 pKa = 7.99TADD522 pKa = 3.5GEE524 pKa = 4.34EE525 pKa = 4.52GSEE528 pKa = 3.84EE529 pKa = 4.91LIIKK533 pKa = 9.88LADD536 pKa = 3.48GKK538 pKa = 10.46ISYY541 pKa = 9.65GATITFDD548 pKa = 3.4YY549 pKa = 10.37MFGGEE554 pKa = 4.28EE555 pKa = 4.09EE556 pKa = 4.12VGEE559 pKa = 4.03ALFYY563 pKa = 10.72RR564 pKa = 11.84DD565 pKa = 3.57GVLISTQRR573 pKa = 11.84FTSDD577 pKa = 3.2AQSGDD582 pKa = 3.33YY583 pKa = 10.86AKK585 pKa = 10.82NFEE588 pKa = 4.34VTDD591 pKa = 3.84GGFDD595 pKa = 3.8TIVIRR600 pKa = 11.84ALDD603 pKa = 3.95NGNGYY608 pKa = 10.01HH609 pKa = 7.43DD610 pKa = 4.98GDD612 pKa = 3.64NSDD615 pKa = 4.09FVVSGVEE622 pKa = 4.04FLGSSQEE629 pKa = 4.04NPISYY634 pKa = 11.0AEE636 pKa = 3.97GTIDD640 pKa = 4.3YY641 pKa = 10.38EE642 pKa = 4.65FGADD646 pKa = 3.45GAGSIVLTSLQNSVRR661 pKa = 11.84LADD664 pKa = 3.6GTEE667 pKa = 3.92PEE669 pKa = 4.38ITISDD674 pKa = 3.57NTIIAKK680 pKa = 10.13DD681 pKa = 3.52ADD683 pKa = 3.56GHH685 pKa = 6.73LVFQIQFTPSTGQWEE700 pKa = 5.18FYY702 pKa = 10.27QYY704 pKa = 11.31QKK706 pKa = 10.32FTIGDD711 pKa = 3.75GSSQTLGFNFRR722 pKa = 11.84VTDD725 pKa = 3.81ADD727 pKa = 3.5GDD729 pKa = 4.32AVNGTVSVGITNHH742 pKa = 4.92GVEE745 pKa = 4.29IEE747 pKa = 4.7GIGAAQGDD755 pKa = 4.36LTVDD759 pKa = 3.56EE760 pKa = 5.51ANLDD764 pKa = 4.38DD765 pKa = 4.06GTQPNEE771 pKa = 3.82SDD773 pKa = 3.39LTQSGTFTLNAMDD786 pKa = 6.08GISEE790 pKa = 4.06IQIGSEE796 pKa = 3.75TFTYY800 pKa = 10.73EE801 pKa = 3.97EE802 pKa = 4.54LVNAASNNISIEE814 pKa = 4.13TDD816 pKa = 2.69HH817 pKa = 6.48GTLVITGYY825 pKa = 10.32SGSEE829 pKa = 3.76TSGTVSYY836 pKa = 10.93SYY838 pKa = 9.46TLKK841 pKa = 11.05DD842 pKa = 3.48SVDD845 pKa = 3.61NDD847 pKa = 3.97TQNGATSDD855 pKa = 3.93EE856 pKa = 4.51YY857 pKa = 11.72VDD859 pKa = 4.01QIDD862 pKa = 4.55VNVTDD867 pKa = 4.59KK868 pKa = 11.64DD869 pKa = 3.84GDD871 pKa = 3.9SSSASININIQDD883 pKa = 4.34DD884 pKa = 4.21APVASDD890 pKa = 3.24TTVSVDD896 pKa = 3.21AMQEE900 pKa = 4.23TVFNANVMLTLDD912 pKa = 3.82YY913 pKa = 10.47SGSMSSTALSEE924 pKa = 4.29QKK926 pKa = 10.58DD927 pKa = 3.65AAKK930 pKa = 10.6KK931 pKa = 10.78LLDD934 pKa = 3.67QYY936 pKa = 11.39QKK938 pKa = 11.22SLNEE942 pKa = 3.85ADD944 pKa = 3.88RR945 pKa = 11.84GDD947 pKa = 3.81VKK949 pKa = 11.64VMVIKK954 pKa = 10.39FATGAATHH962 pKa = 5.91EE963 pKa = 4.64KK964 pKa = 9.85VWLTIAEE971 pKa = 4.08AKK973 pKa = 10.47AYY975 pKa = 9.41IDD977 pKa = 3.04QGKK980 pKa = 9.14PYY982 pKa = 10.55GIDD985 pKa = 2.9SGTNYY990 pKa = 10.88DD991 pKa = 4.43DD992 pKa = 4.08ALKK995 pKa = 9.65TLIEE999 pKa = 4.63NYY1001 pKa = 9.95SSSGKK1006 pKa = 8.38VTAEE1010 pKa = 3.59GTINNSYY1017 pKa = 10.82FMTDD1021 pKa = 3.47GQPTQSNYY1029 pKa = 9.53TSSNDD1034 pKa = 3.25GSKK1037 pKa = 9.38TEE1039 pKa = 4.29DD1040 pKa = 3.41SKK1042 pKa = 12.01GDD1044 pKa = 3.64GIGIGEE1050 pKa = 4.46HH1051 pKa = 6.58SNNPYY1056 pKa = 9.53YY1057 pKa = 10.94AQGTDD1062 pKa = 3.56ANSTTYY1068 pKa = 10.81VGTNGEE1074 pKa = 4.21VGQGNWQAFLEE1085 pKa = 4.2EE1086 pKa = 4.46HH1087 pKa = 7.35DD1088 pKa = 3.77IVSYY1092 pKa = 10.57AIGMGNNVQSSGLEE1106 pKa = 3.89PIAYY1110 pKa = 9.58DD1111 pKa = 3.59GTSEE1115 pKa = 4.22QQNHH1119 pKa = 6.82DD1120 pKa = 4.48KK1121 pKa = 10.94LLQPQVDD1128 pKa = 4.44FNKK1131 pKa = 10.79LGDD1134 pKa = 4.3LLVSTTPEE1142 pKa = 4.05AQPVTSTLSAEE1153 pKa = 4.13LGADD1157 pKa = 3.31GGYY1160 pKa = 10.19VSSITISGEE1169 pKa = 3.86TYY1171 pKa = 10.05TFDD1174 pKa = 3.26GTTITNPNGTTANGHH1189 pKa = 4.99TLCVTTEE1196 pKa = 4.13FGTFEE1201 pKa = 4.39INLEE1205 pKa = 4.28TGVYY1209 pKa = 9.55TYY1211 pKa = 10.96TPVEE1215 pKa = 3.85ALAQVEE1221 pKa = 4.23QEE1223 pKa = 4.44TIGFTVTDD1231 pKa = 3.69NDD1233 pKa = 4.26GDD1235 pKa = 4.04TSSATLTIDD1244 pKa = 4.62LSALVPDD1251 pKa = 4.21VPTVVEE1257 pKa = 4.48DD1258 pKa = 3.45AHH1260 pKa = 6.44DD1261 pKa = 3.67TVITNEE1267 pKa = 4.11NGASSIQAEE1276 pKa = 4.12ASLGVVVGKK1285 pKa = 10.35DD1286 pKa = 3.36SAGSTVTVTNANGDD1300 pKa = 4.09SLVGDD1305 pKa = 4.07TVTVKK1310 pKa = 9.33VTDD1313 pKa = 4.02ANGSEE1318 pKa = 4.26HH1319 pKa = 7.28EE1320 pKa = 4.6INATYY1325 pKa = 11.25NDD1327 pKa = 3.48VQLKK1331 pKa = 9.78YY1332 pKa = 10.61ISDD1335 pKa = 3.78GSGGLIAVTDD1345 pKa = 4.49DD1346 pKa = 3.06ATQTHH1351 pKa = 6.08VFTVEE1356 pKa = 3.64GDD1358 pKa = 3.61ASAGTYY1364 pKa = 9.32KK1365 pKa = 9.56VTMIHH1370 pKa = 6.8ALDD1373 pKa = 3.91PVYY1376 pKa = 10.56SVPSILEE1383 pKa = 4.1DD1384 pKa = 3.12QTTQISLNSNGGSNSGINVTLNSNGGAVNQYY1415 pKa = 10.45GNSIGINDD1423 pKa = 4.16YY1424 pKa = 11.32DD1425 pKa = 3.84VGSAKK1430 pKa = 10.75YY1431 pKa = 9.45EE1432 pKa = 3.84IEE1434 pKa = 4.42GYY1436 pKa = 10.03EE1437 pKa = 4.05VLSMNFNALTGVSVSKK1453 pKa = 11.0VSVNFNDD1460 pKa = 4.59FGYY1463 pKa = 10.79HH1464 pKa = 6.91DD1465 pKa = 4.17DD1466 pKa = 5.23AIVKK1470 pKa = 9.41VYY1472 pKa = 9.47YY1473 pKa = 10.1TDD1475 pKa = 3.43NTYY1478 pKa = 9.23DD1479 pKa = 3.19TYY1481 pKa = 11.27EE1482 pKa = 3.72VHH1484 pKa = 7.28GDD1486 pKa = 3.36YY1487 pKa = 10.88NDD1489 pKa = 3.89RR1490 pKa = 11.84DD1491 pKa = 4.26GIDD1494 pKa = 3.08IEE1496 pKa = 4.24IPEE1499 pKa = 4.79GKK1501 pKa = 7.78TLSRR1505 pKa = 11.84IDD1507 pKa = 4.52FGAEE1511 pKa = 3.79DD1512 pKa = 4.7YY1513 pKa = 11.65YY1514 pKa = 11.59DD1515 pKa = 4.55DD1516 pKa = 4.54YY1517 pKa = 11.83SVNSTITVVYY1527 pKa = 9.62DD1528 pKa = 3.45KK1529 pKa = 11.22QSTIPVDD1536 pKa = 3.61NPEE1539 pKa = 3.84QTLEE1543 pKa = 4.19FGAVVTDD1550 pKa = 3.93GNGDD1554 pKa = 3.24QSEE1557 pKa = 4.69VVTFDD1562 pKa = 3.12VTVDD1566 pKa = 3.5SDD1568 pKa = 3.9HH1569 pKa = 6.65VLQGDD1574 pKa = 3.75VSDD1577 pKa = 5.17SIIGGDD1583 pKa = 3.77GDD1585 pKa = 4.63DD1586 pKa = 3.99TFKK1589 pKa = 11.37LLNGQDD1595 pKa = 3.36INFDD1599 pKa = 3.61GLDD1602 pKa = 3.35AHH1604 pKa = 7.3IKK1606 pKa = 10.21NIEE1609 pKa = 4.23TIDD1612 pKa = 3.77LSAEE1616 pKa = 3.97GKK1618 pKa = 10.23NEE1620 pKa = 3.74IKK1622 pKa = 10.62NLSLDD1627 pKa = 3.92DD1628 pKa = 4.76VIDD1631 pKa = 3.66MTDD1634 pKa = 3.0SDD1636 pKa = 4.55NEE1638 pKa = 4.05IKK1640 pKa = 10.48ISGTSEE1646 pKa = 4.66DD1647 pKa = 4.24EE1648 pKa = 4.11VHH1650 pKa = 6.52LTNEE1654 pKa = 3.44WSTNNVVDD1662 pKa = 3.59ADD1664 pKa = 4.4GYY1666 pKa = 10.49IEE1668 pKa = 4.8YY1669 pKa = 10.06IGTSDD1674 pKa = 4.71DD1675 pKa = 3.36EE1676 pKa = 4.59TVKK1679 pKa = 11.01VKK1681 pKa = 10.1IHH1683 pKa = 5.93QDD1685 pKa = 2.39IHH1687 pKa = 7.2TDD1689 pKa = 3.08IQQ1691 pKa = 3.44

Molecular weight:
178.88 kDa
Isoelectric point according different methods:






Protein with the highest isoelectric point:
>tr|A0A4Q0XQW7|A0A4Q0XQW7_9PROT Bcr/CflA family efflux transporter OS=Arcobacter sp. CECT 8987 OX=2044504 GN=CRV04_06635 PE=3 SV=1
MM1 pKa = 7.28KK2 pKa = 9.44RR3 pKa = 11.84TYY5 pKa = 10.04QPHH8 pKa = 4.86NTPRR12 pKa = 11.84KK13 pKa = 7.31RR14 pKa = 11.84THH16 pKa = 5.88GFRR19 pKa = 11.84VRR21 pKa = 11.84MKK23 pKa = 8.73TKK25 pKa = 10.05SGRR28 pKa = 11.84KK29 pKa = 8.71VISARR34 pKa = 11.84RR35 pKa = 11.84AKK37 pKa = 9.87GRR39 pKa = 11.84KK40 pKa = 8.75RR41 pKa = 11.84LAVV44 pKa = 3.41

Molecular weight:
5.25 kDa
Isoelectric point according different methods:






Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2486

0

2486

787083

37

1691

316.6

35.89

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.481 ± 0.062

0.962 ± 0.018

5.292 ± 0.04

7.266 ± 0.047

5.161 ± 0.044

5.513 ± 0.06

2.049 ± 0.024

8.576 ± 0.052

8.449 ± 0.054

9.825 ± 0.06

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.568 ± 0.024

5.663 ± 0.039

2.896 ± 0.029

3.695 ± 0.033

3.033 ± 0.028

6.28 ± 0.033

5.298 ± 0.042

6.268 ± 0.035

0.724 ± 0.017

4.002 ± 0.032

Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski