Fowl aviadenovirus 9

Taxonomy: Viruses; Varidnaviria; Bamfordvirae; Preplasmiviricota; Tectiliviricetes; Rowavirales; Adenoviridae; Aviadenovirus; Fowl aviadenovirus D

Average proteome isoelectric point is 6.35

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 14 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|Q77VH6|Q77VH6_9ADEN Pre-hexon-linking protein VIII OS=Fowl aviadenovirus 9 OX=172864 GN=L4 PE=2 SV=1
MM1 pKa = 7.57AKK3 pKa = 8.71STPFAFSMGQHH14 pKa = 6.27SSRR17 pKa = 11.84KK18 pKa = 9.39RR19 pKa = 11.84PADD22 pKa = 3.44SEE24 pKa = 4.19NTQNASKK31 pKa = 10.45VAKK34 pKa = 8.38TQTSATRR41 pKa = 11.84AGVDD45 pKa = 3.89GNDD48 pKa = 4.54DD49 pKa = 4.1LNLVYY54 pKa = 9.94PFWLQNSTSGGGGGGSGGNPSLNPPFIDD82 pKa = 3.73PNGPLYY88 pKa = 10.31VQNSLLYY95 pKa = 10.35VKK97 pKa = 7.76TTAPIEE103 pKa = 4.16VEE105 pKa = 4.18NKK107 pKa = 10.19SLALAYY113 pKa = 10.19DD114 pKa = 3.26SSLAVDD120 pKa = 4.4AQNQLQVKK128 pKa = 9.41VDD130 pKa = 3.49TEE132 pKa = 4.38GPIRR136 pKa = 11.84ISPDD140 pKa = 3.08GLDD143 pKa = 3.18IAVDD147 pKa = 4.11PSTLEE152 pKa = 4.49VDD154 pKa = 4.98DD155 pKa = 4.29EE156 pKa = 4.42WEE158 pKa = 4.15LAVKK162 pKa = 10.47LDD164 pKa = 3.9PNGPLTASSAGININVDD181 pKa = 3.31DD182 pKa = 4.43TLLIEE187 pKa = 6.31DD188 pKa = 5.19DD189 pKa = 4.7DD190 pKa = 5.21ANQAKK195 pKa = 9.98EE196 pKa = 4.27LGVHH200 pKa = 6.76LNPNGPITADD210 pKa = 3.67RR211 pKa = 11.84DD212 pKa = 4.04GLDD215 pKa = 4.84LEE217 pKa = 5.18IDD219 pKa = 3.79SQTMVVKK226 pKa = 10.82DD227 pKa = 3.65SGTSGGVLGVLLKK240 pKa = 10.66PSGGLQSSIQGIGVAVADD258 pKa = 4.23TLTITSNTVEE268 pKa = 4.46VKK270 pKa = 9.86TDD272 pKa = 3.72PNGSISYY279 pKa = 8.85SANGIAVKK287 pKa = 9.85PDD289 pKa = 3.35PSGPLTSSGTGLSVVTAAEE308 pKa = 4.34GSIQSSNAGLAVKK321 pKa = 9.12TDD323 pKa = 3.53PSGPITSGSNGLNLSYY339 pKa = 10.48NASDD343 pKa = 3.55FTVSQGVLNIIRR355 pKa = 11.84NPSTLPDD362 pKa = 3.81AYY364 pKa = 10.91LEE366 pKa = 4.62SGTNYY371 pKa = 10.38LNNFTAQAEE380 pKa = 4.23NSSVFKK386 pKa = 9.71FNCAYY391 pKa = 10.39FLQSWYY397 pKa = 11.27SNGLVTSSLYY407 pKa = 11.01LKK409 pKa = 9.95IDD411 pKa = 3.37RR412 pKa = 11.84AQFSNMPTGQSAEE425 pKa = 3.86NARR428 pKa = 11.84YY429 pKa = 7.46FTFWVPTYY437 pKa = 10.69EE438 pKa = 4.07SLNLSRR444 pKa = 11.84VSTPTITPNTVQWGAFSPAQNCSGNPAFQYY474 pKa = 11.38NLTQPPSIYY483 pKa = 10.33FEE485 pKa = 4.51PKK487 pKa = 9.45SGSVQTFQPVLTGAWNTDD505 pKa = 3.03TYY507 pKa = 11.83NPGTVQVCILPQTVVGGQSTFVNMTCYY534 pKa = 10.52NFRR537 pKa = 11.84CQNPGIFKK545 pKa = 10.21VAASNGTFTIGPIFYY560 pKa = 10.19SCPTNEE566 pKa = 4.2LTRR569 pKa = 11.84PTT571 pKa = 3.88

Molecular weight: 60.24 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|Q9QM75|Q9QM75_9ADEN PX OS=Fowl aviadenovirus 9 OX=172864 PE=4 SV=1
MM1 pKa = 8.23DD2 pKa = 4.06YY3 pKa = 11.11AALSPHH9 pKa = 5.83VGGWALRR16 pKa = 11.84DD17 pKa = 3.88GYY19 pKa = 11.25LGDD22 pKa = 3.42SSLRR26 pKa = 11.84GGAINWSNVGSRR38 pKa = 11.84LSSALGTAGRR48 pKa = 11.84WMFNQGNRR56 pKa = 11.84FLNSNTFGQIKK67 pKa = 10.24QGFKK71 pKa = 10.64DD72 pKa = 3.17SGVIRR77 pKa = 11.84NVANLAGEE85 pKa = 4.3TLGALTDD92 pKa = 3.46IGRR95 pKa = 11.84LKK97 pKa = 10.28IQQDD101 pKa = 3.8LEE103 pKa = 4.06KK104 pKa = 10.67LRR106 pKa = 11.84RR107 pKa = 11.84KK108 pKa = 9.96ALGEE112 pKa = 4.63DD113 pKa = 4.23GPATQAEE120 pKa = 4.55LQALIQALQAQVAAGEE136 pKa = 4.64SVPTTAPTVGPSAPAEE152 pKa = 4.31VPRR155 pKa = 11.84PTTRR159 pKa = 11.84PIPEE163 pKa = 4.15MVTEE167 pKa = 3.93VRR169 pKa = 11.84PPVTSSAPAVPEE181 pKa = 3.78TDD183 pKa = 2.94RR184 pKa = 11.84PTTLEE189 pKa = 3.83MRR191 pKa = 11.84PPPAKK196 pKa = 9.84RR197 pKa = 11.84RR198 pKa = 11.84RR199 pKa = 11.84KK200 pKa = 9.85RR201 pKa = 11.84PAPGSWRR208 pKa = 11.84TRR210 pKa = 11.84LNSLSGNGVAVSRR223 pKa = 11.84RR224 pKa = 11.84RR225 pKa = 11.84MCYY228 pKa = 9.89

Molecular weight: 24.43 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

14

0

14

7156

163

1159

511.1

57.27

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

8.622 ± 0.526

1.314 ± 0.232

6.009 ± 0.368

6.358 ± 0.842

4.15 ± 0.288

6.177 ± 0.483

2.194 ± 0.367

3.703 ± 0.13

3.815 ± 0.39

8.147 ± 0.361

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.166 ± 0.24

4.919 ± 0.685

6.694 ± 0.254

4.053 ± 0.291

7.183 ± 0.758

6.736 ± 0.555

6.233 ± 0.395

6.47 ± 0.233

1.146 ± 0.135

3.913 ± 0.438
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski