Acetobacter orientalis

Taxonomy: cellular organisms; Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acetobacter

Average proteome isoelectric point is 6.78

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2561 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A2Z5ZEC6|A0A2Z5ZEC6_9PROT Flagellar protein flbB OS=Acetobacter orientalis OX=146474 GN=Abor_017_092 PE=4 SV=1
MM1 pKa = 7.41SVFNAISTAVSGINAQSTAFSNLSNNIANSQTVGYY36 pKa = 9.35KK37 pKa = 10.06ADD39 pKa = 3.41STAFQDD45 pKa = 4.33FVSGQLINSSRR56 pKa = 11.84NEE58 pKa = 3.95GNSDD62 pKa = 3.09SVAAVTIQHH71 pKa = 5.95VDD73 pKa = 3.08KK74 pKa = 11.22QGTATVSNDD83 pKa = 3.2SLAMSIDD90 pKa = 3.2GSGLFNVTKK99 pKa = 10.54SPSDD103 pKa = 3.56TSSSASLNQTRR114 pKa = 11.84YY115 pKa = 5.18YY116 pKa = 9.04TRR118 pKa = 11.84NGEE121 pKa = 4.08FYY123 pKa = 10.34EE124 pKa = 4.51DD125 pKa = 3.41KK126 pKa = 10.97NGYY129 pKa = 8.78LVNTSGYY136 pKa = 8.53YY137 pKa = 9.71LSGYY141 pKa = 9.82KK142 pKa = 8.73VTDD145 pKa = 3.3QSTGTLSNQLTSVNVANVQYY165 pKa = 11.07SPISNPTISVKK176 pKa = 10.67GYY178 pKa = 9.78VGSSVDD184 pKa = 3.48KK185 pKa = 8.76TTSTATNSQTTTIYY199 pKa = 10.98DD200 pKa = 3.98SNNDD204 pKa = 3.17AHH206 pKa = 6.47NVKK209 pKa = 10.35LDD211 pKa = 3.22WSYY214 pKa = 12.09VSDD217 pKa = 3.51STTTNNLQTWKK228 pKa = 10.38LDD230 pKa = 3.18VSTPDD235 pKa = 3.41TNSSVSGTYY244 pKa = 9.53YY245 pKa = 10.72VQFDD249 pKa = 4.03STTGAIQTVSKK260 pKa = 11.19SEE262 pKa = 4.48DD263 pKa = 3.42GTNSLISTTNSSIPLTFNYY282 pKa = 9.84TDD284 pKa = 4.29LQSQSASMPFQLNLGLQGSTSGATLSSSTGPVITTPTTDD323 pKa = 3.24SKK325 pKa = 11.6SSSQVGSYY333 pKa = 9.72TGVEE337 pKa = 3.99IQSDD341 pKa = 4.16GTIMAKK347 pKa = 10.74FSLGDD352 pKa = 3.43TQAIGQVALTNFASVNNLQEE372 pKa = 4.19VSGQAYY378 pKa = 9.84LATPSAGTPQTGLVGEE394 pKa = 4.68NGTGSLTVGYY404 pKa = 8.3TEE406 pKa = 5.81SSTTDD411 pKa = 3.28LTSDD415 pKa = 3.83LSALIIAQQAYY426 pKa = 6.15TANTKK431 pKa = 9.89IVTTASEE438 pKa = 4.17LLQTTIAMKK447 pKa = 10.31QQ448 pKa = 3.01

Molecular weight: 46.84 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A252BCH2|A0A252BCH2_9PROT Magnesium transporter OS=Acetobacter orientalis OX=146474 GN=Abor_065_093 PE=3 SV=1
MM1 pKa = 7.35KK2 pKa = 9.4RR3 pKa = 11.84TYY5 pKa = 10.2QPSRR9 pKa = 11.84LVRR12 pKa = 11.84KK13 pKa = 9.21RR14 pKa = 11.84RR15 pKa = 11.84HH16 pKa = 4.48GFRR19 pKa = 11.84ARR21 pKa = 11.84MATVGGRR28 pKa = 11.84RR29 pKa = 11.84IIANRR34 pKa = 11.84RR35 pKa = 11.84SKK37 pKa = 10.47GRR39 pKa = 11.84KK40 pKa = 8.72RR41 pKa = 11.84LSAA44 pKa = 3.96

Molecular weight: 5.24 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2561

0

2561

843554

42

3141

329.4

35.74

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

11.834 ± 0.068

1.028 ± 0.016

4.872 ± 0.035

5.03 ± 0.051

3.593 ± 0.032

8.164 ± 0.1

2.487 ± 0.025

4.807 ± 0.036

3.558 ± 0.036

10.479 ± 0.061

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.421 ± 0.025

3.1 ± 0.04

5.52 ± 0.047

4.177 ± 0.033

5.98 ± 0.051

5.731 ± 0.051

6.298 ± 0.037

7.159 ± 0.039

1.357 ± 0.02

2.406 ± 0.032
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski