Torque teno virus 13

Taxonomy: Viruses; Anelloviridae; Alphatorquevirus

Average proteome isoelectric point is 7.31

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|Q99AQ6|Q99AQ6_9VIRU Orf2 OS=Torque teno virus 13 OX=687352 PE=4 SV=1
MM1 pKa = 7.49FLGKK5 pKa = 10.46LYY7 pKa = 10.43RR8 pKa = 11.84KK9 pKa = 9.31KK10 pKa = 10.7RR11 pKa = 11.84KK12 pKa = 9.27LLLQAVRR19 pKa = 11.84APQAPSSMSSSWRR32 pKa = 11.84VPRR35 pKa = 11.84GDD37 pKa = 2.97VSARR41 pKa = 11.84EE42 pKa = 4.17LCWYY46 pKa = 9.96RR47 pKa = 11.84SVRR50 pKa = 11.84EE51 pKa = 4.01SHH53 pKa = 7.55DD54 pKa = 3.66AFCGCRR60 pKa = 11.84DD61 pKa = 3.67PVFHH65 pKa = 7.45LSRR68 pKa = 11.84LAARR72 pKa = 11.84SNHH75 pKa = 5.74QGPPTPPTDD84 pKa = 3.69EE85 pKa = 4.76RR86 pKa = 11.84PSASTPVRR94 pKa = 11.84RR95 pKa = 11.84LLPLPSYY102 pKa = 10.18PGEE105 pKa = 4.49GPQARR110 pKa = 11.84WPGGDD115 pKa = 3.48GEE117 pKa = 4.77GAGDD121 pKa = 3.72ARR123 pKa = 11.84GGAGDD128 pKa = 3.74GGARR132 pKa = 11.84AGEE135 pKa = 4.12EE136 pKa = 4.22EE137 pKa = 4.56YY138 pKa = 10.81RR139 pKa = 11.84PEE141 pKa = 5.46DD142 pKa = 3.65LDD144 pKa = 3.82EE145 pKa = 5.2LFGATEE151 pKa = 4.01QEE153 pKa = 4.2QQ154 pKa = 3.33

Molecular weight: 16.84 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|Q99AQ6|Q99AQ6_9VIRU Orf2 OS=Torque teno virus 13 OX=687352 PE=4 SV=1
MM1 pKa = 7.07PVIWAGMGTGGQNYY15 pKa = 9.48AVRR18 pKa = 11.84SDD20 pKa = 4.01DD21 pKa = 3.71FVVDD25 pKa = 3.65KK26 pKa = 11.52GFGGSFATEE35 pKa = 4.08TFSLRR40 pKa = 11.84VLYY43 pKa = 9.88DD44 pKa = 2.59QHH46 pKa = 7.53QRR48 pKa = 11.84GFNRR52 pKa = 11.84WSHH55 pKa = 5.12TNEE58 pKa = 4.02DD59 pKa = 3.74LDD61 pKa = 3.8LARR64 pKa = 11.84YY65 pKa = 9.11RR66 pKa = 11.84GCKK69 pKa = 4.79WTFYY73 pKa = 10.25RR74 pKa = 11.84HH75 pKa = 6.93PDD77 pKa = 2.97TDD79 pKa = 4.08FIVYY83 pKa = 7.46FTNNPPMKK91 pKa = 8.68TNQYY95 pKa = 7.19TAPLTTPGMLMRR107 pKa = 11.84SKK109 pKa = 10.99YY110 pKa = 10.26KK111 pKa = 10.39ILIPSFKK118 pKa = 10.0TKK120 pKa = 10.41PKK122 pKa = 9.67GKK124 pKa = 8.58KK125 pKa = 8.16TISFRR130 pKa = 11.84ARR132 pKa = 11.84PPKK135 pKa = 10.3LFQDD139 pKa = 3.03KK140 pKa = 9.91WYY142 pKa = 8.12TQQDD146 pKa = 4.26LCPVPLIQLNLTAADD161 pKa = 3.93FTHH164 pKa = 7.36PFGLPLTDD172 pKa = 3.72SPCVRR177 pKa = 11.84FQVLGDD183 pKa = 4.26LYY185 pKa = 11.29NNCLNIDD192 pKa = 4.43LPQFDD197 pKa = 5.0DD198 pKa = 4.48KK199 pKa = 11.54GTISDD204 pKa = 3.53ASSYY208 pKa = 11.45SRR210 pKa = 11.84DD211 pKa = 3.06NKK213 pKa = 9.92QQLEE217 pKa = 4.28EE218 pKa = 4.28LYY220 pKa = 9.13KK221 pKa = 10.4TLFVKK226 pKa = 10.49KK227 pKa = 10.38GCGHH231 pKa = 6.32YY232 pKa = 9.46WQTFMTNSMVKK243 pKa = 10.08AHH245 pKa = 7.05IDD247 pKa = 3.0AAQAQNHH254 pKa = 4.92QQDD257 pKa = 3.43TSGPQSAKK265 pKa = 10.94DD266 pKa = 3.69PFPTKK271 pKa = 9.64PDD273 pKa = 3.49RR274 pKa = 11.84NQFEE278 pKa = 3.85QWKK281 pKa = 10.5NKK283 pKa = 8.23FTDD286 pKa = 3.56PRR288 pKa = 11.84DD289 pKa = 3.91SNFLFATYY297 pKa = 9.82HH298 pKa = 6.63PEE300 pKa = 5.06NITQTIKK307 pKa = 10.13TMRR310 pKa = 11.84DD311 pKa = 2.8NNFALEE317 pKa = 4.1TGKK320 pKa = 10.31NDD322 pKa = 4.71LYY324 pKa = 11.55GDD326 pKa = 3.64YY327 pKa = 10.19QAQYY331 pKa = 9.38TRR333 pKa = 11.84NTHH336 pKa = 6.52LLDD339 pKa = 3.92YY340 pKa = 10.74YY341 pKa = 11.08LGFYY345 pKa = 10.79SPIFLSSGRR354 pKa = 11.84SNTEE358 pKa = 3.05FFTAYY363 pKa = 10.31RR364 pKa = 11.84DD365 pKa = 3.62IIYY368 pKa = 10.85NPLLDD373 pKa = 4.44KK374 pKa = 10.82GTGNMIWFQYY384 pKa = 7.77HH385 pKa = 5.84TKK387 pKa = 9.48TDD389 pKa = 3.86NIFKK393 pKa = 10.47KK394 pKa = 10.22PEE396 pKa = 4.1CHH398 pKa = 6.57WEE400 pKa = 3.99ILDD403 pKa = 3.64MPLWALCNGYY413 pKa = 9.82KK414 pKa = 10.14EE415 pKa = 4.23YY416 pKa = 11.25LEE418 pKa = 4.45SQIKK422 pKa = 10.37YY423 pKa = 10.75GDD425 pKa = 3.41ILVEE429 pKa = 4.09GKK431 pKa = 10.24VLIRR435 pKa = 11.84CPYY438 pKa = 8.16TKK440 pKa = 10.34PPLADD445 pKa = 4.19PNNSLAGYY453 pKa = 8.99VVYY456 pKa = 9.02NTNFGQGKK464 pKa = 8.47WIDD467 pKa = 3.59GKK469 pKa = 11.15GYY471 pKa = 9.7IPLRR475 pKa = 11.84HH476 pKa = 5.78RR477 pKa = 11.84SKK479 pKa = 9.84WYY481 pKa = 10.47VMLMYY486 pKa = 9.71QTDD489 pKa = 3.79VLHH492 pKa = 7.41DD493 pKa = 4.63LVTCGPWQYY502 pKa = 11.46RR503 pKa = 11.84DD504 pKa = 3.79DD505 pKa = 4.26NKK507 pKa = 10.86NSQLIAKK514 pKa = 9.29YY515 pKa = 10.25RR516 pKa = 11.84FTFYY520 pKa = 10.02WGGNMVHH527 pKa = 6.07SQVIRR532 pKa = 11.84NPCKK536 pKa = 9.04DD537 pKa = 3.59TQVSGPRR544 pKa = 11.84RR545 pKa = 11.84QPRR548 pKa = 11.84EE549 pKa = 3.74IQVVDD554 pKa = 3.98PQLITPPWVLHH565 pKa = 6.59SFDD568 pKa = 3.34QRR570 pKa = 11.84RR571 pKa = 11.84GMFTEE576 pKa = 4.12TAIRR580 pKa = 11.84RR581 pKa = 11.84LLRR584 pKa = 11.84QPLPGEE590 pKa = 4.13YY591 pKa = 10.04APPALRR597 pKa = 11.84VPLLFPSSEE606 pKa = 3.95FQRR609 pKa = 11.84EE610 pKa = 4.41GEE612 pKa = 4.23GAEE615 pKa = 4.45SDD617 pKa = 3.59LSSPAKK623 pKa = 10.17RR624 pKa = 11.84PRR626 pKa = 11.84LWQEE630 pKa = 3.72EE631 pKa = 4.08DD632 pKa = 4.7SEE634 pKa = 4.73TQTQSSEE641 pKa = 4.2GPAEE645 pKa = 4.14TTRR648 pKa = 11.84EE649 pKa = 3.86LLEE652 pKa = 4.27RR653 pKa = 11.84KK654 pKa = 9.48LRR656 pKa = 11.84EE657 pKa = 3.84QRR659 pKa = 11.84VLNLQLQQFAVQLAKK674 pKa = 9.61TQANLHH680 pKa = 6.26INPLLYY686 pKa = 10.55SQQQ689 pKa = 3.22

Molecular weight: 80.06 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2

0

2

843

154

689

421.5

48.45

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

5.457 ± 2.025

1.542 ± 0.192

6.287 ± 0.209

4.745 ± 1.44

4.864 ± 1.071

6.88 ± 2.273

2.254 ± 0.145

3.321 ± 1.57

5.338 ± 1.295

9.015 ± 0.271

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.898 ± 0.283

4.508 ± 1.824

7.592 ± 1.322

6.406 ± 1.186

6.88 ± 2.273

5.813 ± 1.243

6.406 ± 1.8

3.915 ± 0.009

2.135 ± 0.088

4.745 ± 1.015
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski