Anopheles darlingi (Mosquito)
Average proteome isoelectric point is 6.62
Get precalculated fractions of proteins
Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
All
Note: above files contain also dissociation constants (pKa)
Virtual 2D-PAGE plot for 10447 proteins (isoelectric point calculated using IPC2_protein)
Get csv file with sequences according to given criteria:
* You can choose from 21 different methods for calculating isoelectric point
Summary statistics related to proteome-wise predictions
Protein with the lowest isoelectric point:
>tr|W5JVS8|W5JVS8_ANODA Uncharacterized protein OS=Anopheles darlingi OX=43151 GN=AND_001243 PE=4 SV=1
MM1 pKa = 7.67 EE2 pKa = 5.28 NFSNPLVVTTIPALWRR18 pKa = 11.84 LVWTLWSKK26 pKa = 11.05 QFMSINDD33 pKa = 3.77 YY34 pKa = 11.19 SSSCYY39 pKa = 9.84 QCWSVCRR46 pKa = 11.84 YY47 pKa = 9.59 CGGWHH52 pKa = 5.8 LTFPYY57 pKa = 10.16 VALGVALILWPHH69 pKa = 6.52 RR70 pKa = 11.84 LWLSHH75 pKa = 5.52 VAGGLLIGLGMLRR88 pKa = 11.84 LLTVCKK94 pKa = 10.28 SRR96 pKa = 11.84 PHH98 pKa = 6.51 SKK100 pKa = 10.66 DD101 pKa = 4.11 DD102 pKa = 3.44 EE103 pKa = 4.54 LLNHH107 pKa = 6.85 FDD109 pKa = 3.99 EE110 pKa = 5.32 QVDD113 pKa = 4.21 RR114 pKa = 11.84 YY115 pKa = 11.5 DD116 pKa = 3.52 NLSDD120 pKa = 3.82 VLVDD124 pKa = 4.84 DD125 pKa = 5.14 SMPEE129 pKa = 3.98 PGQSLEE135 pKa = 5.54 DD136 pKa = 5.2 DD137 pKa = 5.11 DD138 pKa = 7.07 DD139 pKa = 6.08 PDD141 pKa = 6.67 DD142 pKa = 5.77 DD143 pKa = 5.93 VNDD146 pKa = 4.85 DD147 pKa = 4.69 DD148 pKa = 6.54 DD149 pKa = 6.28 VDD151 pKa = 4.82 VDD153 pKa = 6.11 DD154 pKa = 7.02 DD155 pKa = 6.27 DD156 pKa = 7.81 DD157 pKa = 7.42 DD158 pKa = 7.16 DD159 pKa = 7.43 DD160 pKa = 6.28 DD161 pKa = 4.51 VALHH165 pKa = 6.26 TGGII169 pKa = 3.97
Molecular weight: 19.19 kDa
Isoelectric point according different methods:
IPC2.protein.svr19 3.707
IPC2_protein 3.77
IPC_protein 3.808
Toseland 3.567
ProMoST 4.012
Dawson 3.834
Bjellqvist 3.986
Wikipedia 3.821
Rodwell 3.63
Grimsley 3.478
Solomon 3.821
Lehninger 3.783
Nozaki 3.948
DTASelect 4.279
Thurlkill 3.643
EMBOSS 3.821
Sillero 3.948
Patrickios 1.926
IPC_peptide 3.821
IPC2_peptide 3.91
IPC2.peptide.svr19 3.831
Protein with the highest isoelectric point:
>tr|W5JTN6|W5JTN6_ANODA Serine-type enodpeptidase OS=Anopheles darlingi OX=43151 GN=AND_000482 PE=3 SV=1
MM1 pKa = 7.11 YY2 pKa = 9.64 PGVSRR7 pKa = 11.84 RR8 pKa = 11.84 KK9 pKa = 10.11 DD10 pKa = 3.23 EE11 pKa = 4.48 FGGSEE16 pKa = 4.09 GSKK19 pKa = 10.4 DD20 pKa = 3.69 RR21 pKa = 11.84 RR22 pKa = 11.84 PTFLNSLRR30 pKa = 11.84 QSIDD34 pKa = 3.01 HH35 pKa = 6.44 PTQDD39 pKa = 3.62 RR40 pKa = 11.84 QASAAGGEE48 pKa = 3.83 IGAISFEE55 pKa = 4.14 RR56 pKa = 11.84 SACQLEE62 pKa = 4.41 GVYY65 pKa = 9.8 IASHH69 pKa = 6.71 RR70 pKa = 11.84 ISRR73 pKa = 11.84 SRR75 pKa = 11.84 DD76 pKa = 2.67 RR77 pKa = 11.84 RR78 pKa = 11.84 AFKK81 pKa = 9.97 TGKK84 pKa = 9.75 LKK86 pKa = 9.85 CTSGMIEE93 pKa = 5.45 FIGHH97 pKa = 5.72 WFRR100 pKa = 11.84 SVKK103 pKa = 10.24 EE104 pKa = 3.79 RR105 pKa = 11.84 VDD107 pKa = 3.63 RR108 pKa = 11.84 LKK110 pKa = 11.08 LKK112 pKa = 10.05 PDD114 pKa = 3.33 YY115 pKa = 10.54 RR116 pKa = 11.84 GSSTSNRR123 pKa = 11.84 SRR125 pKa = 11.84 YY126 pKa = 9.36 IPLEE130 pKa = 4.03 AEE132 pKa = 4.86 AISSLRR138 pKa = 11.84 RR139 pKa = 11.84 GSRR142 pKa = 11.84 WLSLRR147 pKa = 11.84 CGVSASDD154 pKa = 3.93 EE155 pKa = 4.29 RR156 pKa = 11.84 QLSAGCARR164 pKa = 4.2
Molecular weight: 18.42 kDa
Isoelectric point according different methods:
IPC2.protein.svr19 9.354
IPC2_protein 9.502
IPC_protein 10.292
Toseland 10.57
ProMoST 10.452
Dawson 10.672
Bjellqvist 10.394
Wikipedia 10.891
Rodwell 10.833
Grimsley 10.716
Solomon 10.789
Lehninger 10.76
Nozaki 10.584
DTASelect 10.379
Thurlkill 10.57
EMBOSS 10.979
Sillero 10.613
Patrickios 10.54
IPC_peptide 10.789
IPC2_peptide 9.545
IPC2.peptide.svr19 8.7
Peptides (in silico digests for buttom-up proteomics)
Below you can find
in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.
Try ESI
ChTry ESI
ArgC ESI
LysN ESI
TryLysC ESI
Try MALDI
ChTry MALDI
ArgC MALDI
LysN MALDI
TryLysC MALDI
Try LTQ
ChTry LTQ
ArgC LTQ
LysN LTQ
TryLysC LTQ
Try MSlow
ChTry MSlow
ArgC MSlow
LysN MSlow
TryLysC MSlow
Try MShigh
ChTry MShigh
ArgC MShigh
LysN MShigh
TryLysC MShigh
General Statistics
Number of major isoforms
Number of additional isoforms
Number of all proteins
Number of amino acids
Min. Seq. Length
Max. Seq. Length
Avg. Seq. Length
Avg. Mol. Weight
10447
0
10447
6035843
33
8216
577.8
64.1
Amino acid frequency
Ala
Cys
Asp
Glu
Phe
Gly
His
Ile
Lys
Leu
7.502 ± 0.024
1.826 ± 0.021
5.309 ± 0.019
6.274 ± 0.03
3.412 ± 0.019
6.774 ± 0.036
2.71 ± 0.016
4.938 ± 0.02
5.137 ± 0.025
8.881 ± 0.029
Met
Asn
Gln
Pro
Arg
Ser
Thr
Val
Trp
Tyr
2.26 ± 0.011
4.42 ± 0.017
5.356 ± 0.025
4.873 ± 0.033
5.748 ± 0.021
8.299 ± 0.039
6.134 ± 0.02
6.218 ± 0.02
0.98 ± 0.007
2.946 ± 0.016
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level
Most of the basic statistics you can see at this page can be downloaded from this CSV file
For dipeptide frequency statistics click here