Amino acid dipepetide frequency for Aquareovirus G (isolate American grass carp/USA/PB01-155/-) (AQRV-G)

Apart from single amino acid frequencies one can also calculate so called amino acid dipeptide frequency.

There is 400 possibilites (441 if we consider Xaa as additional 21st amino acid representing all non-standard or unknown amino acids). Thus, if the dipeptides would be present randomly in proteins each amino acid dipeptide should be present with 0.25% frequency. As it is not the case in the nature, for better visablity all more than expected dipepetides are marked by red, and those which are underrepresented are marked by blue in the table.

All values are presented as per milles (‰), therefore need to be multiplied by 10-3.

For more information see sequence space article on Wikipedia.

AlaCysAspGluPheGlyHisIleLysLeuMetAsnProGlnArgSerThrValTrpTyrXaa
Ala
14.652AlaAla: 14.652 ± 2.045
1.32AlaCys: 1.32 ± 0.445
4.488AlaAsp: 4.488 ± 0.661
3.432AlaGlu: 3.432 ± 0.711
2.64AlaPhe: 2.64 ± 0.681
7.26AlaGly: 7.26 ± 1.531
2.772AlaHis: 2.772 ± 0.884
6.732AlaIle: 6.732 ± 0.693
1.584AlaLys: 1.584 ± 0.399
11.088AlaLeu: 11.088 ± 0.62
2.64AlaMet: 2.64 ± 0.532
4.62AlaAsn: 4.62 ± 0.603
7.128AlaPro: 7.128 ± 0.779
5.28AlaGln: 5.28 ± 0.77
6.336AlaArg: 6.336 ± 0.819
7.128AlaSer: 7.128 ± 0.938
8.184AlaThr: 8.184 ± 1.443
5.412AlaVal: 5.412 ± 0.729
1.188AlaTrp: 1.188 ± 0.216
3.168AlaTyr: 3.168 ± 0.852
0.0AlaXaa: 0.0 ± 0.0
Cys
1.98CysAla: 1.98 ± 0.379
0.264CysCys: 0.264 ± 0.293
1.188CysAsp: 1.188 ± 0.29
0.396CysGlu: 0.396 ± 0.19
0.132CysPhe: 0.132 ± 0.137
0.792CysGly: 0.792 ± 0.299
0.132CysHis: 0.132 ± 0.137
0.792CysIle: 0.792 ± 0.308
0.264CysLys: 0.264 ± 0.168
0.792CysLeu: 0.792 ± 0.324
0.792CysMet: 0.792 ± 0.391
0.528CysAsn: 0.528 ± 0.263
0.792CysPro: 0.792 ± 0.489
0.396CysGln: 0.396 ± 0.186
0.396CysArg: 0.396 ± 0.185
0.924CysSer: 0.924 ± 0.394
0.792CysThr: 0.792 ± 0.308
0.792CysVal: 0.792 ± 0.446
0.0CysTrp: 0.0 ± 0.0
0.66CysTyr: 0.66 ± 0.343
0.0CysXaa: 0.0 ± 0.0
Asp
4.884AspAla: 4.884 ± 0.838
0.66AspCys: 0.66 ± 0.343
2.64AspAsp: 2.64 ± 0.649
1.98AspGlu: 1.98 ± 0.555
1.32AspPhe: 1.32 ± 0.477
3.036AspGly: 3.036 ± 0.693
1.452AspHis: 1.452 ± 0.493
4.62AspIle: 4.62 ± 0.651
0.528AspLys: 0.528 ± 0.353
4.356AspLeu: 4.356 ± 0.733
1.716AspMet: 1.716 ± 0.445
1.848AspAsn: 1.848 ± 0.479
5.676AspPro: 5.676 ± 0.586
1.98AspGln: 1.98 ± 0.266
1.584AspArg: 1.584 ± 0.401
4.092AspSer: 4.092 ± 0.518
2.244AspThr: 2.244 ± 0.691
4.224AspVal: 4.224 ± 0.798
0.396AspTrp: 0.396 ± 0.21
2.244AspTyr: 2.244 ± 0.365
0.0AspXaa: 0.0 ± 0.0
Glu
2.772GluAla: 2.772 ± 0.636
0.792GluCys: 0.792 ± 0.295
2.244GluAsp: 2.244 ± 0.495
1.188GluGlu: 1.188 ± 0.534
1.056GluPhe: 1.056 ± 0.397
1.056GluGly: 1.056 ± 0.269
0.924GluHis: 0.924 ± 0.251
1.584GluIle: 1.584 ± 0.461
0.924GluLys: 0.924 ± 0.329
4.356GluLeu: 4.356 ± 0.832
0.924GluMet: 0.924 ± 0.258
0.924GluAsn: 0.924 ± 0.282
1.848GluPro: 1.848 ± 0.419
1.32GluGln: 1.32 ± 0.476
2.244GluArg: 2.244 ± 0.95
1.848GluSer: 1.848 ± 0.268
2.904GluThr: 2.904 ± 0.776
2.904GluVal: 2.904 ± 0.618
0.792GluTrp: 0.792 ± 0.304
1.32GluTyr: 1.32 ± 0.407
0.0GluXaa: 0.0 ± 0.0
Phe
3.168PheAla: 3.168 ± 0.623
0.132PheCys: 0.132 ± 0.127
2.112PheAsp: 2.112 ± 0.664
1.32PheGlu: 1.32 ± 0.392
0.396PhePhe: 0.396 ± 0.162
1.848PheGly: 1.848 ± 0.407
0.528PheHis: 0.528 ± 0.264
1.452PheIle: 1.452 ± 0.416
1.056PheLys: 1.056 ± 0.478
2.112PheLeu: 2.112 ± 0.404
0.924PheMet: 0.924 ± 0.431
1.716PheAsn: 1.716 ± 0.404
2.508PhePro: 2.508 ± 0.61
0.792PheGln: 0.792 ± 0.259
1.716PheArg: 1.716 ± 0.478
2.64PheSer: 2.64 ± 0.701
3.036PheThr: 3.036 ± 0.668
1.716PheVal: 1.716 ± 0.579
0.528PheTrp: 0.528 ± 0.256
0.924PheTyr: 0.924 ± 0.318
0.0PheXaa: 0.0 ± 0.0
Gly
5.016GlyAla: 5.016 ± 0.769
0.924GlyCys: 0.924 ± 0.485
3.036GlyAsp: 3.036 ± 0.644
1.584GlyGlu: 1.584 ± 0.513
1.716GlyPhe: 1.716 ± 0.493
2.244GlyGly: 2.244 ± 0.388
0.528GlyHis: 0.528 ± 0.225
2.64GlyIle: 2.64 ± 0.497
1.848GlyLys: 1.848 ± 0.364
4.092GlyLeu: 4.092 ± 0.938
1.188GlyMet: 1.188 ± 0.372
2.508GlyAsn: 2.508 ± 0.461
2.772GlyPro: 2.772 ± 0.589
1.98GlyGln: 1.98 ± 0.648
3.168GlyArg: 3.168 ± 0.478
3.828GlySer: 3.828 ± 0.369
3.564GlyThr: 3.564 ± 0.899
3.96GlyVal: 3.96 ± 0.631
0.528GlyTrp: 0.528 ± 0.392
1.848GlyTyr: 1.848 ± 0.445
0.0GlyXaa: 0.0 ± 0.0
His
3.432HisAla: 3.432 ± 0.755
0.396HisCys: 0.396 ± 0.241
0.924HisAsp: 0.924 ± 0.512
0.528HisGlu: 0.528 ± 0.227
0.924HisPhe: 0.924 ± 0.334
1.056HisGly: 1.056 ± 0.251
1.188HisHis: 1.188 ± 0.365
1.32HisIle: 1.32 ± 0.242
0.396HisLys: 0.396 ± 0.244
3.036HisLeu: 3.036 ± 0.593
0.924HisMet: 0.924 ± 0.267
0.924HisAsn: 0.924 ± 0.285
2.64HisPro: 2.64 ± 0.413
1.056HisGln: 1.056 ± 0.418
1.32HisArg: 1.32 ± 0.395
1.98HisSer: 1.98 ± 0.582
2.112HisThr: 2.112 ± 0.634
2.376HisVal: 2.376 ± 0.726
0.132HisTrp: 0.132 ± 0.156
0.66HisTyr: 0.66 ± 0.462
0.0HisXaa: 0.0 ± 0.0
Ile
4.62IleAla: 4.62 ± 0.616
0.792IleCys: 0.792 ± 0.353
4.356IleAsp: 4.356 ± 0.926
1.188IleGlu: 1.188 ± 0.325
0.792IlePhe: 0.792 ± 0.32
1.98IleGly: 1.98 ± 0.363
1.98IleHis: 1.98 ± 0.356
1.848IleIle: 1.848 ± 0.54
0.66IleLys: 0.66 ± 0.421
4.752IleLeu: 4.752 ± 0.62
1.848IleMet: 1.848 ± 0.518
1.848IleAsn: 1.848 ± 0.413
5.676IlePro: 5.676 ± 0.802
3.168IleGln: 3.168 ± 0.446
2.904IleArg: 2.904 ± 0.444
2.904IleSer: 2.904 ± 0.495
5.412IleThr: 5.412 ± 1.093
2.904IleVal: 2.904 ± 0.621
0.924IleTrp: 0.924 ± 0.327
1.056IleTyr: 1.056 ± 0.224
0.0IleXaa: 0.0 ± 0.0
Lys
1.584LysAla: 1.584 ± 0.293
0.396LysCys: 0.396 ± 0.269
0.792LysAsp: 0.792 ± 0.349
0.792LysGlu: 0.792 ± 0.49
0.528LysPhe: 0.528 ± 0.279
1.056LysGly: 1.056 ± 0.475
1.32LysHis: 1.32 ± 0.535
0.792LysIle: 0.792 ± 0.45
0.528LysLys: 0.528 ± 0.324
2.244LysLeu: 2.244 ± 0.725
0.132LysMet: 0.132 ± 0.156
0.132LysAsn: 0.132 ± 0.109
1.716LysPro: 1.716 ± 0.288
0.792LysGln: 0.792 ± 0.402
1.452LysArg: 1.452 ± 0.524
1.716LysSer: 1.716 ± 0.411
1.188LysThr: 1.188 ± 0.472
1.188LysVal: 1.188 ± 0.363
0.528LysTrp: 0.528 ± 0.276
0.924LysTyr: 0.924 ± 0.432
0.0LysXaa: 0.0 ± 0.0
Leu
11.22LeuAla: 11.22 ± 1.442
1.716LeuCys: 1.716 ± 0.414
4.884LeuAsp: 4.884 ± 0.794
3.696LeuGlu: 3.696 ± 0.703
3.3LeuPhe: 3.3 ± 0.431
3.96LeuGly: 3.96 ± 0.777
1.716LeuHis: 1.716 ± 0.501
3.96LeuIle: 3.96 ± 0.592
2.772LeuLys: 2.772 ± 0.871
10.164LeuLeu: 10.164 ± 1.661
2.772LeuMet: 2.772 ± 0.516
3.96LeuAsn: 3.96 ± 0.747
7.92LeuPro: 7.92 ± 1.182
3.696LeuGln: 3.696 ± 0.504
6.468LeuArg: 6.468 ± 0.988
6.996LeuSer: 6.996 ± 0.475
9.372LeuThr: 9.372 ± 1.545
5.676LeuVal: 5.676 ± 1.046
1.056LeuTrp: 1.056 ± 0.47
2.112LeuTyr: 2.112 ± 0.455
0.0LeuXaa: 0.0 ± 0.0
Met
2.244MetAla: 2.244 ± 0.477
0.264MetCys: 0.264 ± 0.147
0.792MetAsp: 0.792 ± 0.48
0.528MetGlu: 0.528 ± 0.168
1.188MetPhe: 1.188 ± 0.363
1.056MetGly: 1.056 ± 0.297
0.924MetHis: 0.924 ± 0.324
1.056MetIle: 1.056 ± 0.399
0.264MetLys: 0.264 ± 0.172
2.508MetLeu: 2.508 ± 0.677
0.396MetMet: 0.396 ± 0.165
1.056MetAsn: 1.056 ± 0.355
1.716MetPro: 1.716 ± 0.465
0.924MetGln: 0.924 ± 0.226
2.508MetArg: 2.508 ± 0.458
3.168MetSer: 3.168 ± 0.521
2.904MetThr: 2.904 ± 0.712
1.188MetVal: 1.188 ± 0.3
0.792MetTrp: 0.792 ± 0.323
1.32MetTyr: 1.32 ± 0.303
0.0MetXaa: 0.0 ± 0.0
Asn
5.808AsnAla: 5.808 ± 1.223
0.132AsnCys: 0.132 ± 0.122
2.772AsnAsp: 2.772 ± 0.401
1.188AsnGlu: 1.188 ± 0.345
1.32AsnPhe: 1.32 ± 0.446
2.64AsnGly: 2.64 ± 0.611
0.924AsnHis: 0.924 ± 0.429
1.716AsnIle: 1.716 ± 0.501
0.924AsnLys: 0.924 ± 0.392
2.904AsnLeu: 2.904 ± 0.658
0.924AsnMet: 0.924 ± 0.38
1.848AsnAsn: 1.848 ± 0.369
2.772AsnPro: 2.772 ± 0.774
1.98AsnGln: 1.98 ± 0.426
2.112AsnArg: 2.112 ± 0.493
1.716AsnSer: 1.716 ± 0.506
2.904AsnThr: 2.904 ± 0.517
3.828AsnVal: 3.828 ± 0.641
1.056AsnTrp: 1.056 ± 0.426
1.32AsnTyr: 1.32 ± 0.398
0.0AsnXaa: 0.0 ± 0.0
Pro
8.316ProAla: 8.316 ± 1.068
0.264ProCys: 0.264 ± 0.176
2.508ProAsp: 2.508 ± 0.586
3.168ProGlu: 3.168 ± 0.762
2.244ProPhe: 2.244 ± 0.386
3.168ProGly: 3.168 ± 0.407
1.98ProHis: 1.98 ± 0.378
4.356ProIle: 4.356 ± 0.745
0.792ProLys: 0.792 ± 0.537
7.524ProLeu: 7.524 ± 0.744
1.188ProMet: 1.188 ± 0.421
3.3ProAsn: 3.3 ± 0.655
7.656ProPro: 7.656 ± 0.937
3.3ProGln: 3.3 ± 0.424
3.96ProArg: 3.96 ± 0.5
8.052ProSer: 8.052 ± 0.918
9.108ProThr: 9.108 ± 1.365
5.676ProVal: 5.676 ± 0.59
1.32ProTrp: 1.32 ± 0.477
1.716ProTyr: 1.716 ± 0.631
0.0ProXaa: 0.0 ± 0.0
Gln
5.28GlnAla: 5.28 ± 0.878
0.528GlnCys: 0.528 ± 0.237
1.584GlnAsp: 1.584 ± 0.43
1.188GlnGlu: 1.188 ± 0.436
1.584GlnPhe: 1.584 ± 0.613
1.32GlnGly: 1.32 ± 0.321
1.584GlnHis: 1.584 ± 0.477
1.584GlnIle: 1.584 ± 0.584
0.528GlnLys: 0.528 ± 0.297
5.148GlnLeu: 5.148 ± 1.184
1.188GlnMet: 1.188 ± 0.283
1.188GlnAsn: 1.188 ± 0.553
3.3GlnPro: 3.3 ± 0.613
1.32GlnGln: 1.32 ± 0.305
2.772GlnArg: 2.772 ± 0.484
1.98GlnSer: 1.98 ± 0.441
2.904GlnThr: 2.904 ± 0.686
2.772GlnVal: 2.772 ± 0.375
0.792GlnTrp: 0.792 ± 0.134
2.244GlnTyr: 2.244 ± 0.74
0.0GlnXaa: 0.0 ± 0.0
Arg
5.676ArgAla: 5.676 ± 0.692
0.528ArgCys: 0.528 ± 0.259
2.772ArgAsp: 2.772 ± 0.488
3.036ArgGlu: 3.036 ± 0.573
2.112ArgPhe: 2.112 ± 0.597
2.112ArgGly: 2.112 ± 0.294
1.584ArgHis: 1.584 ± 0.556
2.772ArgIle: 2.772 ± 0.748
0.528ArgLys: 0.528 ± 0.263
5.412ArgLeu: 5.412 ± 0.896
1.32ArgMet: 1.32 ± 0.259
2.64ArgAsn: 2.64 ± 0.426
4.092ArgPro: 4.092 ± 0.595
2.376ArgGln: 2.376 ± 0.362
3.564ArgArg: 3.564 ± 0.532
3.432ArgSer: 3.432 ± 0.515
3.828ArgThr: 3.828 ± 0.432
6.864ArgVal: 6.864 ± 0.647
0.792ArgTrp: 0.792 ± 0.222
1.848ArgTyr: 1.848 ± 0.418
0.0ArgXaa: 0.0 ± 0.0
Ser
6.996SerAla: 6.996 ± 0.682
1.056SerCys: 1.056 ± 0.57
4.092SerAsp: 4.092 ± 0.606
2.904SerGlu: 2.904 ± 0.387
2.376SerPhe: 2.376 ± 0.473
4.62SerGly: 4.62 ± 0.963
1.848SerHis: 1.848 ± 0.75
5.016SerIle: 5.016 ± 0.688
2.112SerLys: 2.112 ± 0.593
8.712SerLeu: 8.712 ± 1.13
1.32SerMet: 1.32 ± 0.316
1.98SerAsn: 1.98 ± 0.518
4.884SerPro: 4.884 ± 0.982
3.036SerGln: 3.036 ± 0.588
3.696SerArg: 3.696 ± 0.758
6.072SerSer: 6.072 ± 0.829
7.656SerThr: 7.656 ± 1.06
4.356SerVal: 4.356 ± 0.578
0.924SerTrp: 0.924 ± 0.243
0.792SerTyr: 0.792 ± 0.35
0.0SerXaa: 0.0 ± 0.0
Thr
8.184ThrAla: 8.184 ± 1.283
1.056ThrCys: 1.056 ± 0.314
4.488ThrAsp: 4.488 ± 1.0
2.112ThrGlu: 2.112 ± 0.381
3.564ThrPhe: 3.564 ± 0.655
3.828ThrGly: 3.828 ± 0.494
2.376ThrHis: 2.376 ± 0.594
3.96ThrIle: 3.96 ± 0.647
1.584ThrLys: 1.584 ± 0.399
7.26ThrLeu: 7.26 ± 0.728
3.432ThrMet: 3.432 ± 0.677
3.828ThrAsn: 3.828 ± 0.777
6.6ThrPro: 6.6 ± 0.754
2.244ThrGln: 2.244 ± 0.5
4.092ThrArg: 4.092 ± 0.503
8.052ThrSer: 8.052 ± 1.109
6.996ThrThr: 6.996 ± 0.828
6.072ThrVal: 6.072 ± 0.837
1.056ThrTrp: 1.056 ± 0.428
3.432ThrTyr: 3.432 ± 0.703
0.0ThrXaa: 0.0 ± 0.0
Val
6.6ValAla: 6.6 ± 0.872
1.188ValCys: 1.188 ± 0.328
3.696ValAsp: 3.696 ± 0.837
2.772ValGlu: 2.772 ± 0.549
1.848ValPhe: 1.848 ± 0.5
3.432ValGly: 3.432 ± 0.856
1.452ValHis: 1.452 ± 0.564
2.64ValIle: 2.64 ± 0.561
1.452ValLys: 1.452 ± 0.377
6.204ValLeu: 6.204 ± 1.002
2.244ValMet: 2.244 ± 0.51
4.356ValAsn: 4.356 ± 1.056
5.94ValPro: 5.94 ± 1.092
2.772ValGln: 2.772 ± 0.582
3.828ValArg: 3.828 ± 0.728
5.94ValSer: 5.94 ± 1.2
5.28ValThr: 5.28 ± 0.782
5.148ValVal: 5.148 ± 0.758
0.792ValTrp: 0.792 ± 0.335
2.508ValTyr: 2.508 ± 0.517
0.0ValXaa: 0.0 ± 0.0
Trp
1.056TrpAla: 1.056 ± 0.37
0.0TrpCys: 0.0 ± 0.0
0.264TrpAsp: 0.264 ± 0.155
0.264TrpGlu: 0.264 ± 0.358
0.792TrpPhe: 0.792 ± 0.266
0.132TrpGly: 0.132 ± 0.115
0.792TrpHis: 0.792 ± 0.333
0.528TrpIle: 0.528 ± 0.224
0.396TrpLys: 0.396 ± 0.223
1.98TrpLeu: 1.98 ± 0.499
0.396TrpMet: 0.396 ± 0.249
0.396TrpAsn: 0.396 ± 0.203
1.452TrpPro: 1.452 ± 0.59
1.188TrpGln: 1.188 ± 0.55
0.924TrpArg: 0.924 ± 0.514
0.792TrpSer: 0.792 ± 0.436
1.584TrpThr: 1.584 ± 0.509
0.792TrpVal: 0.792 ± 0.342
0.264TrpTrp: 0.264 ± 0.244
0.132TrpTyr: 0.132 ± 0.116
0.0TrpXaa: 0.0 ± 0.0
Tyr
3.564TyrAla: 3.564 ± 0.833
0.396TyrCys: 0.396 ± 0.224
1.848TyrAsp: 1.848 ± 0.509
0.792TyrGlu: 0.792 ± 0.295
0.792TyrPhe: 0.792 ± 0.367
2.376TyrGly: 2.376 ± 0.427
1.32TyrHis: 1.32 ± 0.423
2.244TyrIle: 2.244 ± 0.451
0.66TyrLys: 0.66 ± 0.281
2.772TyrLeu: 2.772 ± 0.697
0.396TyrMet: 0.396 ± 0.198
1.188TyrAsn: 1.188 ± 0.291
2.508TyrPro: 2.508 ± 0.381
1.188TyrGln: 1.188 ± 0.314
2.244TyrArg: 2.244 ± 0.471
1.188TyrSer: 1.188 ± 0.364
2.244TyrThr: 2.244 ± 0.706
2.244TyrVal: 2.244 ± 0.422
0.264TyrTrp: 0.264 ± 0.209
0.66TyrTyr: 0.66 ± 0.242
0.0TyrXaa: 0.0 ± 0.0
Xaa
0.0XaaAla: 0.0 ± 0.0
0.0XaaCys: 0.0 ± 0.0
0.0XaaAsp: 0.0 ± 0.0
0.0XaaGlu: 0.0 ± 0.0
0.0XaaPhe: 0.0 ± 0.0
0.0XaaGly: 0.0 ± 0.0
0.0XaaHis: 0.0 ± 0.0
0.0XaaIle: 0.0 ± 0.0
0.0XaaLys: 0.0 ± 0.0
0.0XaaLeu: 0.0 ± 0.0
0.0XaaMet: 0.0 ± 0.0
0.0XaaAsn: 0.0 ± 0.0
0.0XaaPro: 0.0 ± 0.0
0.0XaaGln: 0.0 ± 0.0
0.0XaaArg: 0.0 ± 0.0
0.0XaaSer: 0.0 ± 0.0
0.0XaaThr: 0.0 ± 0.0
0.0XaaVal: 0.0 ± 0.0
0.0XaaTrp: 0.0 ± 0.0
0.0XaaTyr: 0.0 ± 0.0
0.0XaaXaa: 0.0 ± 0.0
Statistics based on 12 proteins (7577 amino acids)

Note: The error has been estimated with the bootstraping (x100) at the protein level

Above dipeptide statistics (among other stats for this proteome) you can download from this CSV file
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski