Sweet potato collusive virus

Taxonomy: Viruses; Riboviria; Pararnavirae; Artverviricota; Revtraviricetes; Ortervirales; Caulimoviridae; Cavemovirus

Average proteome isoelectric point is 6.6

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 4 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    

Protein with the lowest isoelectric point:
>tr|F2XXY6|F2XXY6_9VIRU Uncharacterized protein OS=Sweet potato collusive virus OX=930168 PE=4 SV=1
MM1 pKa = 7.63EE2 pKa = 6.09KK3 pKa = 9.58LTSLLISCPEE13 pKa = 4.13MEE15 pKa = 5.63QMMQQLLAEE24 pKa = 4.24MQKK27 pKa = 11.14LNATVEE33 pKa = 4.4KK34 pKa = 9.97QNSRR38 pKa = 11.84IEE40 pKa = 3.94QLEE43 pKa = 4.06NEE45 pKa = 4.33LEE47 pKa = 4.11KK48 pKa = 11.24EE49 pKa = 4.07KK50 pKa = 10.96GKK52 pKa = 11.02KK53 pKa = 9.43PLTEE57 pKa = 3.76EE58 pKa = 4.39KK59 pKa = 10.25IISEE63 pKa = 4.21KK64 pKa = 10.56EE65 pKa = 3.76LEE67 pKa = 4.15KK68 pKa = 10.91EE69 pKa = 5.34KK70 pKa = 10.74EE71 pKa = 4.07ISWKK75 pKa = 10.88AKK77 pKa = 7.42IKK79 pKa = 10.54KK80 pKa = 9.85YY81 pKa = 11.03GEE83 pKa = 4.14ASSKK87 pKa = 9.13EE88 pKa = 3.82EE89 pKa = 4.16KK90 pKa = 10.14IIEE93 pKa = 4.06KK94 pKa = 10.55DD95 pKa = 3.04VWQKK99 pKa = 11.21PKK101 pKa = 9.27GTHH104 pKa = 5.61IGSIYY109 pKa = 8.26VTEE112 pKa = 5.2FVRR115 pKa = 11.84LMNYY119 pKa = 10.09LNSRR123 pKa = 11.84HH124 pKa = 6.25ANLNEE129 pKa = 3.96IYY131 pKa = 10.83SLTDD135 pKa = 3.29YY136 pKa = 11.37NKK138 pKa = 10.6LVADD142 pKa = 4.01KK143 pKa = 10.03NTDD146 pKa = 2.97EE147 pKa = 4.2RR148 pKa = 11.84LIRR151 pKa = 11.84AAYY154 pKa = 8.85QHH156 pKa = 6.46GLLHH160 pKa = 4.79VHH162 pKa = 6.58YY163 pKa = 9.9IEE165 pKa = 4.93SANQIKK171 pKa = 9.78MYY173 pKa = 10.87DD174 pKa = 3.45EE175 pKa = 5.58GIVNAYY181 pKa = 10.19LKK183 pKa = 10.57LAQLTKK189 pKa = 10.66AKK191 pKa = 10.0CIYY194 pKa = 9.99IRR196 pKa = 11.84FYY198 pKa = 10.47TAFAEE203 pKa = 4.55VTKK206 pKa = 10.67EE207 pKa = 3.83GIIPKK212 pKa = 9.86IEE214 pKa = 4.5AIKK217 pKa = 10.82LGITYY222 pKa = 9.79EE223 pKa = 4.17KK224 pKa = 10.09IQYY227 pKa = 8.71DD228 pKa = 3.66VCEE231 pKa = 4.03QEE233 pKa = 4.93LFEE236 pKa = 4.82EE237 pKa = 4.34NRR239 pKa = 11.84VHH241 pKa = 7.89DD242 pKa = 4.36FLRR245 pKa = 11.84HH246 pKa = 5.06KK247 pKa = 10.43KK248 pKa = 10.53AIGLLTIRR256 pKa = 11.84RR257 pKa = 11.84EE258 pKa = 4.22LEE260 pKa = 3.95STEE263 pKa = 3.93GNIWVYY269 pKa = 8.98EE270 pKa = 3.9NRR272 pKa = 11.84NNRR275 pKa = 11.84IIYY278 pKa = 9.81APSRR282 pKa = 11.84ARR284 pKa = 11.84KK285 pKa = 9.0EE286 pKa = 3.97EE287 pKa = 3.95VKK289 pKa = 10.66KK290 pKa = 11.08VVAAWQQKK298 pKa = 9.39IYY300 pKa = 9.98TPEE303 pKa = 4.02RR304 pKa = 11.84NIPDD308 pKa = 3.82CGITAPCISEE318 pKa = 4.07PCLKK322 pKa = 10.13ILCEE326 pKa = 3.91LSKK329 pKa = 11.02NQLVVKK335 pKa = 8.42HH336 pKa = 4.65QCKK339 pKa = 10.12YY340 pKa = 8.58CGKK343 pKa = 8.35MKK345 pKa = 10.48KK346 pKa = 9.67KK347 pKa = 10.83EE348 pKa = 4.04EE349 pKa = 3.99VDD351 pKa = 3.37YY352 pKa = 11.28SLPEE356 pKa = 4.6DD357 pKa = 4.46IIMKK361 pKa = 10.43DD362 pKa = 3.11VDD364 pKa = 3.83EE365 pKa = 5.65DD366 pKa = 4.64SDD368 pKa = 4.66VEE370 pKa = 4.57DD371 pKa = 3.9KK372 pKa = 11.35KK373 pKa = 11.52EE374 pKa = 3.64EE375 pKa = 3.83NAYY378 pKa = 10.74DD379 pKa = 3.75KK380 pKa = 11.42DD381 pKa = 3.34AFRR384 pKa = 11.84PDD386 pKa = 3.17KK387 pKa = 11.19VADD390 pKa = 4.05AGDD393 pKa = 3.89DD394 pKa = 3.8VKK396 pKa = 11.43EE397 pKa = 4.15KK398 pKa = 11.11

Molecular weight:
46.46 kDa
Isoelectric point according different methods:






Protein with the highest isoelectric point:
>tr|F2XXY4|F2XXY4_9VIRU Coat protein/movement protein OS=Sweet potato collusive virus OX=930168 PE=4 SV=1
MM1 pKa = 7.51NRR3 pKa = 11.84MTYY6 pKa = 7.35MTVKK10 pKa = 9.29ITIPTYY16 pKa = 9.17MSRR19 pKa = 11.84IYY21 pKa = 10.52HH22 pKa = 5.97GLFDD26 pKa = 4.17TGANTCVCKK35 pKa = 10.31TKK37 pKa = 10.62VLPPEE42 pKa = 3.61KK43 pKa = 9.59WIEE46 pKa = 3.8IDD48 pKa = 3.66NKK50 pKa = 10.13VLTGFSEE57 pKa = 4.24EE58 pKa = 4.28KK59 pKa = 10.79NVIKK63 pKa = 10.85YY64 pKa = 10.22RR65 pKa = 11.84ADD67 pKa = 3.51NIKK70 pKa = 10.51IMIAKK75 pKa = 9.67KK76 pKa = 10.33EE77 pKa = 4.0FIIPYY82 pKa = 9.06IYY84 pKa = 11.31AMDD87 pKa = 5.36NINADD92 pKa = 3.87IIIGATFYY100 pKa = 11.36NKK102 pKa = 10.1YY103 pKa = 10.71SPITIDD109 pKa = 3.38MEE111 pKa = 4.04KK112 pKa = 10.84GIIKK116 pKa = 8.07FTNKK120 pKa = 10.29GEE122 pKa = 4.17VYY124 pKa = 10.25PNYY127 pKa = 9.91LVKK130 pKa = 10.77YY131 pKa = 8.17PRR133 pKa = 11.84KK134 pKa = 9.44KK135 pKa = 10.86VLIPWEE141 pKa = 4.4KK142 pKa = 10.45GNPSIIQPLQNEE154 pKa = 4.42QINNINEE161 pKa = 3.97VEE163 pKa = 4.16EE164 pKa = 4.25LNNILGEE171 pKa = 4.77DD172 pKa = 3.47IYY174 pKa = 11.56GDD176 pKa = 3.51NPLKK180 pKa = 10.49HH181 pKa = 5.8WEE183 pKa = 3.97KK184 pKa = 10.45HH185 pKa = 3.27KK186 pKa = 9.8TYY188 pKa = 11.25AKK190 pKa = 10.18IEE192 pKa = 4.21LKK194 pKa = 11.05NPDD197 pKa = 3.25DD198 pKa = 5.46HH199 pKa = 8.4IYY201 pKa = 10.46KK202 pKa = 10.44PPINYY207 pKa = 9.16QEE209 pKa = 3.94SDD211 pKa = 3.52YY212 pKa = 11.62KK213 pKa = 9.92EE214 pKa = 4.26FKK216 pKa = 9.41MHH218 pKa = 6.44IDD220 pKa = 3.46EE221 pKa = 4.26MVKK224 pKa = 10.17EE225 pKa = 4.36GFIEE229 pKa = 4.16EE230 pKa = 4.54CKK232 pKa = 10.64NLEE235 pKa = 3.98NKK237 pKa = 10.09KK238 pKa = 9.7YY239 pKa = 10.14SSPAFIVNKK248 pKa = 9.82HH249 pKa = 5.02SEE251 pKa = 3.94IKK253 pKa = 9.97RR254 pKa = 11.84GKK256 pKa = 8.92SRR258 pKa = 11.84MVIDD262 pKa = 4.34YY263 pKa = 10.98KK264 pKa = 11.3DD265 pKa = 3.65LNKK268 pKa = 9.74KK269 pKa = 10.44AKK271 pKa = 9.72VIKK274 pKa = 10.48HH275 pKa = 6.75PIPNKK280 pKa = 10.33DD281 pKa = 2.85ILINRR286 pKa = 11.84GIKK289 pKa = 10.15ANYY292 pKa = 8.88FSKK295 pKa = 10.63FDD297 pKa = 4.02CKK299 pKa = 10.9SGFYY303 pKa = 10.05HH304 pKa = 7.06IKK306 pKa = 10.66LEE308 pKa = 4.19EE309 pKa = 4.4DD310 pKa = 3.45SKK312 pKa = 11.49KK313 pKa = 9.19YY314 pKa = 8.84TAFTVPQGYY323 pKa = 7.93YY324 pKa = 9.0VWIVLPFGYY333 pKa = 10.17HH334 pKa = 6.06NSPSIYY340 pKa = 9.25QQFMDD345 pKa = 5.31GIFRR349 pKa = 11.84PYY351 pKa = 10.14YY352 pKa = 10.54DD353 pKa = 5.22FILVYY358 pKa = 10.17IDD360 pKa = 5.59DD361 pKa = 4.06ILIFSKK367 pKa = 9.69TYY369 pKa = 9.84EE370 pKa = 3.75EE371 pKa = 4.49HH372 pKa = 7.19KK373 pKa = 10.16IHH375 pKa = 7.8LEE377 pKa = 3.42IFRR380 pKa = 11.84NIIIKK385 pKa = 10.35HH386 pKa = 5.96GIVLSKK392 pKa = 10.62KK393 pKa = 9.07KK394 pKa = 10.88AEE396 pKa = 3.95IGKK399 pKa = 9.38QKK401 pKa = 10.55IEE403 pKa = 3.86FLGVKK408 pKa = 9.49IEE410 pKa = 3.93QGGIEE415 pKa = 4.57LQPHH419 pKa = 7.13IIDD422 pKa = 5.09KK423 pKa = 10.69ILEE426 pKa = 3.87KK427 pKa = 10.43HH428 pKa = 6.29IKK430 pKa = 9.63IKK432 pKa = 10.51SKK434 pKa = 11.17KK435 pKa = 8.31EE436 pKa = 3.67LQSILGLVNQIRR448 pKa = 11.84NFLPNLSKK456 pKa = 10.62ILLPIQKK463 pKa = 9.83KK464 pKa = 10.4LKK466 pKa = 10.11IKK468 pKa = 10.81NEE470 pKa = 4.25EE471 pKa = 3.53VWEE474 pKa = 4.11WTKK477 pKa = 11.29EE478 pKa = 3.89DD479 pKa = 3.54EE480 pKa = 4.92QNIIKK485 pKa = 10.71LKK487 pKa = 10.42DD488 pKa = 3.38YY489 pKa = 11.33CKK491 pKa = 11.12DD492 pKa = 3.29NVIKK496 pKa = 8.4MTYY499 pKa = 9.14PVEE502 pKa = 4.18EE503 pKa = 5.14KK504 pKa = 11.01DD505 pKa = 3.58MNWIIEE511 pKa = 3.89VDD513 pKa = 3.37ASKK516 pKa = 10.71EE517 pKa = 3.99YY518 pKa = 11.04YY519 pKa = 10.66GNCLKK524 pKa = 10.84YY525 pKa = 10.56KK526 pKa = 9.6KK527 pKa = 10.4DD528 pKa = 3.42KK529 pKa = 10.8IEE531 pKa = 4.05YY532 pKa = 7.44ICRR535 pKa = 11.84YY536 pKa = 9.69NSGTFKK542 pKa = 10.54EE543 pKa = 4.43HH544 pKa = 6.35EE545 pKa = 4.2KK546 pKa = 11.03NYY548 pKa = 10.52DD549 pKa = 3.16INRR552 pKa = 11.84KK553 pKa = 7.67EE554 pKa = 4.49LIAIYY559 pKa = 10.13KK560 pKa = 9.78GLEE563 pKa = 3.72HH564 pKa = 6.44YY565 pKa = 10.81AIFTTQGKK573 pKa = 9.77KK574 pKa = 9.68LVRR577 pKa = 11.84TDD579 pKa = 3.19NSQAYY584 pKa = 8.67YY585 pKa = 9.54WIKK588 pKa = 10.43NSKK591 pKa = 9.04IKK593 pKa = 10.92NSIDD597 pKa = 3.25MKK599 pKa = 10.15NVKK602 pKa = 10.25GILAKK607 pKa = 10.18IIMYY611 pKa = 10.43DD612 pKa = 3.58FDD614 pKa = 4.77IEE616 pKa = 4.71IIDD619 pKa = 3.88GKK621 pKa = 8.73TNIVADD627 pKa = 4.2FLSRR631 pKa = 11.84NGTDD635 pKa = 3.54DD636 pKa = 3.3ATITGG641 pKa = 3.86

Molecular weight:
75.5 kDa
Isoelectric point according different methods:






Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

4

0

4

2352

49

1264

588.0

69.47

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

3.316 ± 0.986

1.19 ± 0.354

5.57 ± 0.136

10.544 ± 1.23

2.976 ± 0.457

3.614 ± 0.422

1.616 ± 0.435

12.287 ± 1.061

12.67 ± 0.521

6.845 ± 0.475

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.168 ± 0.083

7.526 ± 1.045

3.316 ± 0.248

3.869 ± 0.549

3.699 ± 0.593

4.677 ± 0.401

4.124 ± 0.243

3.444 ± 0.777

0.978 ± 0.144

5.57 ± 0.601

Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski