Dolosicoccus paucivorans

Taxonomy: cellular organisms; Bacteria; Terrabacteria group; Firmicutes; Bacilli; Lactobacillales; Aerococcaceae; Dolosicoccus

Average proteome isoelectric point is 5.93

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 1609 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A2N6SM31|A0A2N6SM31_9LACT Dihydroorotate dehydrogenase OS=Dolosicoccus paucivorans OX=84521 GN=pyrD PE=3 SV=1
MM1 pKa = 7.42SVLKK5 pKa = 10.56KK6 pKa = 10.41IIYY9 pKa = 9.79GLLIGWLGAFSLLTSSAQADD29 pKa = 3.97GVTNIVMTGSDD40 pKa = 3.4RR41 pKa = 11.84QADD44 pKa = 3.76GSGQSDD50 pKa = 3.62STLVVSYY57 pKa = 11.48NEE59 pKa = 3.96GTGQVSLISLPQNLMISIPEE79 pKa = 3.94QGEE82 pKa = 4.17GTLAEE87 pKa = 4.78AYY89 pKa = 10.45SIGGGQLVADD99 pKa = 5.93GIEE102 pKa = 3.96EE103 pKa = 4.2WTDD106 pKa = 3.29ASIDD110 pKa = 3.87DD111 pKa = 4.39YY112 pKa = 11.31LTLDD116 pKa = 3.49MAGVAEE122 pKa = 5.49LIDD125 pKa = 3.81EE126 pKa = 4.51VGGVTVYY133 pKa = 10.59VSEE136 pKa = 4.7SFEE139 pKa = 3.72QDD141 pKa = 2.58GYY143 pKa = 11.54SFQEE147 pKa = 4.26GDD149 pKa = 3.95TLTMDD154 pKa = 4.31GSQALAYY161 pKa = 8.43MRR163 pKa = 11.84HH164 pKa = 6.06LPQEE168 pKa = 4.43GEE170 pKa = 4.08LVSKK174 pKa = 8.32QEE176 pKa = 3.78RR177 pKa = 11.84QAQVIRR183 pKa = 11.84SLGEE187 pKa = 3.61EE188 pKa = 4.08LAGEE192 pKa = 4.34DD193 pKa = 4.16LSAFGYY199 pKa = 10.13IKK201 pKa = 10.67LYY203 pKa = 10.48QNYY206 pKa = 9.64SGYY209 pKa = 10.06IDD211 pKa = 3.81SSLGKK216 pKa = 9.27MEE218 pKa = 4.88MINLVKK224 pKa = 10.36EE225 pKa = 4.73LIQSGSGLSYY235 pKa = 11.18HH236 pKa = 6.66EE237 pKa = 5.7LDD239 pKa = 3.92EE240 pKa = 4.45QTTPDD245 pKa = 3.77QLQMLLQSS253 pKa = 3.97

Molecular weight: 27.25 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A2N6SKT2|A0A2N6SKT2_9LACT 60 kDa chaperonin OS=Dolosicoccus paucivorans OX=84521 GN=groL PE=3 SV=1
MM1 pKa = 7.36KK2 pKa = 9.43RR3 pKa = 11.84TYY5 pKa = 9.7QPKK8 pKa = 8.93KK9 pKa = 9.66RR10 pKa = 11.84KK11 pKa = 9.39RR12 pKa = 11.84QTTHH16 pKa = 5.48GFRR19 pKa = 11.84NRR21 pKa = 11.84MKK23 pKa = 9.56TKK25 pKa = 10.26NGRR28 pKa = 11.84HH29 pKa = 3.75VLARR33 pKa = 11.84RR34 pKa = 11.84RR35 pKa = 11.84RR36 pKa = 11.84KK37 pKa = 8.81GRR39 pKa = 11.84KK40 pKa = 8.91RR41 pKa = 11.84LTVV44 pKa = 3.11

Molecular weight: 5.52 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

1609

0

1609

511702

25

1795

318.0

35.83

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.932 ± 0.061

0.474 ± 0.015

5.888 ± 0.055

7.661 ± 0.077

4.132 ± 0.041

6.422 ± 0.054

2.205 ± 0.026

7.268 ± 0.051

5.864 ± 0.049

10.013 ± 0.075

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.658 ± 0.032

4.341 ± 0.037

3.771 ± 0.039

4.791 ± 0.054

4.189 ± 0.047

5.698 ± 0.043

5.827 ± 0.046

7.069 ± 0.05

0.926 ± 0.02

3.871 ± 0.043
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski