Ferrimonas balearica (strain DSM 9799 / CCM 4581 / KCTC 23876 / PAT)

Taxonomy: cellular organisms; Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Ferrimonadaceae; Ferrimonas; Ferrimonas balearica

Average proteome isoelectric point is 6.06

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 3781 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|E1SU05|E1SU05_FERBD Uncharacterized protein OS=Ferrimonas balearica (strain DSM 9799 / CCM 4581 / KCTC 23876 / PAT) OX=550540 GN=Fbal_3049 PE=4 SV=1
MM1 pKa = 8.32RR2 pKa = 11.84YY3 pKa = 9.02PLLASAVLLALTGCGSGSDD22 pKa = 3.68SDD24 pKa = 4.55SGNTPDD30 pKa = 4.85PTPQPTPNTAPTLSLSQYY48 pKa = 6.97TTAEE52 pKa = 4.08DD53 pKa = 4.28TPFSLSLADD62 pKa = 4.53LVSDD66 pKa = 3.87VDD68 pKa = 3.8GDD70 pKa = 4.2NISLSVEE77 pKa = 3.75ACGDD81 pKa = 3.49QLSCQLSGTTLTLTPADD98 pKa = 4.92DD99 pKa = 3.75YY100 pKa = 11.56HH101 pKa = 8.5GEE103 pKa = 3.93QSVRR107 pKa = 11.84LSASDD112 pKa = 4.29GEE114 pKa = 4.45ASTSAEE120 pKa = 3.75LTLTVEE126 pKa = 4.71AVNDD130 pKa = 3.86APLLAVSDD138 pKa = 3.91QQVEE142 pKa = 4.23EE143 pKa = 4.96DD144 pKa = 4.14GSLTLDD150 pKa = 3.7LASWISDD157 pKa = 3.19VDD159 pKa = 3.64GDD161 pKa = 4.58ALTLSVASCAANIDD175 pKa = 3.86CALDD179 pKa = 3.7NTSLTLTPAADD190 pKa = 3.55HH191 pKa = 6.79FGDD194 pKa = 3.62SHH196 pKa = 8.75SIGLTVTDD204 pKa = 4.35AANASTSASFNLTVSGVNDD223 pKa = 3.63APQWQAIAAQTLQYY237 pKa = 10.54DD238 pKa = 3.5QSLTLDD244 pKa = 4.24LTRR247 pKa = 11.84HH248 pKa = 5.87IADD251 pKa = 4.48ADD253 pKa = 3.76NDD255 pKa = 4.18SLSFSVVSCDD265 pKa = 4.72NLQCQLNGSEE275 pKa = 4.63LTLSAPAEE283 pKa = 4.27AGVTYY288 pKa = 10.24PLTLRR293 pKa = 11.84ATDD296 pKa = 4.05GSDD299 pKa = 3.61EE300 pKa = 4.3VDD302 pKa = 3.06TALQVAITKK311 pKa = 9.9VPVDD315 pKa = 4.97AIAGVQFFPPYY326 pKa = 10.33NGLTGVDD333 pKa = 3.61NVTLSLHH340 pKa = 6.07SEE342 pKa = 3.85QDD344 pKa = 3.45LTQLTINGEE353 pKa = 4.46VITLEE358 pKa = 5.28NPRR361 pKa = 11.84QWQQNFPLQMGDD373 pKa = 3.37TLFTVVLEE381 pKa = 4.5TATEE385 pKa = 4.17TLSLTKK391 pKa = 9.46TVRR394 pKa = 11.84YY395 pKa = 9.9QGDD398 pKa = 3.76LHH400 pKa = 7.13QGSADD405 pKa = 3.41LTYY408 pKa = 11.0LGDD411 pKa = 3.64RR412 pKa = 11.84TVLVDD417 pKa = 4.4DD418 pKa = 4.28YY419 pKa = 11.59RR420 pKa = 11.84AGALVAFDD428 pKa = 4.46LDD430 pKa = 3.92TRR432 pKa = 11.84EE433 pKa = 4.04TTAYY437 pKa = 9.84PSDD440 pKa = 3.95RR441 pKa = 11.84LTGMNIDD448 pKa = 3.6FLDD451 pKa = 3.72WYY453 pKa = 10.52VALDD457 pKa = 3.55SEE459 pKa = 4.72RR460 pKa = 11.84LLGSAWDD467 pKa = 3.63QDD469 pKa = 3.34AAANKK474 pKa = 9.62LVEE477 pKa = 4.41VNLTDD482 pKa = 3.41LTITEE487 pKa = 5.09RR488 pKa = 11.84YY489 pKa = 8.88NLSNVPVQVSHH500 pKa = 6.49LTASTDD506 pKa = 2.9ASLVYY511 pKa = 9.42FVFDD515 pKa = 5.15NSRR518 pKa = 11.84QDD520 pKa = 3.62PNTGAWYY527 pKa = 8.77PVEE530 pKa = 4.31EE531 pKa = 4.93FYY533 pKa = 11.15QFEE536 pKa = 4.53VATNTLTLLADD547 pKa = 4.12TAQVDD552 pKa = 3.84DD553 pKa = 5.56DD554 pKa = 4.68GPLTRR559 pKa = 11.84VRR561 pKa = 11.84GMILDD566 pKa = 3.83EE567 pKa = 4.5TNDD570 pKa = 3.48RR571 pKa = 11.84LLMVNQNYY579 pKa = 10.1SDD581 pKa = 3.7PAARR585 pKa = 11.84LLALPLSGPDD595 pKa = 3.02EE596 pKa = 4.42GRR598 pKa = 11.84LVEE601 pKa = 4.64LTPSSDD607 pKa = 3.46PGCLDD612 pKa = 3.98FAAQEE617 pKa = 4.26YY618 pKa = 10.16YY619 pKa = 10.53EE620 pKa = 4.38LRR622 pKa = 11.84NVRR625 pKa = 11.84DD626 pKa = 4.38GKK628 pKa = 10.13WLMVMQNDD636 pKa = 3.15NWASYY641 pKa = 10.6QLDD644 pKa = 3.83INTLCLTEE652 pKa = 3.78HH653 pKa = 6.36HH654 pKa = 6.69RR655 pKa = 11.84VPEE658 pKa = 4.02SLLLNRR664 pKa = 11.84EE665 pKa = 4.13SLQGIDD671 pKa = 3.68VNPLTGEE678 pKa = 4.06ILLGFYY684 pKa = 9.57PGPIVYY690 pKa = 9.92QPEE693 pKa = 3.87TDD695 pKa = 3.21SYY697 pKa = 11.26RR698 pKa = 11.84GAEE701 pKa = 3.82AAGFAGEE708 pKa = 4.15PWNIQEE714 pKa = 4.38PTAIHH719 pKa = 5.85YY720 pKa = 9.45RR721 pKa = 11.84ADD723 pKa = 3.18THH725 pKa = 6.55QIVYY729 pKa = 10.79GDD731 pKa = 4.37DD732 pKa = 3.39QFLMQLDD739 pKa = 4.32LQTGEE744 pKa = 4.31VTQLAQLRR752 pKa = 11.84DD753 pKa = 4.13NILKK757 pKa = 10.62LEE759 pKa = 4.04WDD761 pKa = 3.93EE762 pKa = 4.51ASQRR766 pKa = 11.84YY767 pKa = 8.28YY768 pKa = 11.07LYY770 pKa = 10.77DD771 pKa = 3.76EE772 pKa = 4.62YY773 pKa = 11.43DD774 pKa = 3.21GLLAYY779 pKa = 10.07DD780 pKa = 3.58VAGEE784 pKa = 3.92QLVTLVEE791 pKa = 4.31EE792 pKa = 4.64ASGQHH797 pKa = 5.83FSYY800 pKa = 10.27PALASDD806 pKa = 3.63GQLYY810 pKa = 10.01YY811 pKa = 10.8VDD813 pKa = 4.91SDD815 pKa = 3.64VLNRR819 pKa = 11.84INPEE823 pKa = 3.72TLEE826 pKa = 4.16INTVSPHH833 pKa = 6.84DD834 pKa = 4.11DD835 pKa = 3.13AAGFRR840 pKa = 11.84SITSLHH846 pKa = 6.55LDD848 pKa = 3.54EE849 pKa = 5.69PNNRR853 pKa = 11.84AIISVSSGGDD863 pKa = 3.08TTYY866 pKa = 10.75IGLDD870 pKa = 3.24LDD872 pKa = 3.88SGVRR876 pKa = 11.84TILLPEE882 pKa = 4.51SDD884 pKa = 5.34LNDD887 pKa = 3.22GDD889 pKa = 4.58YY890 pKa = 11.35NILSADD896 pKa = 4.02GSLMWYY902 pKa = 9.99FDD904 pKa = 3.6WANDD908 pKa = 3.5QVMSLNLDD916 pKa = 3.59TQAITPVTPASTNHH930 pKa = 5.78YY931 pKa = 10.33KK932 pKa = 10.87LGDD935 pKa = 3.49PTGLFRR941 pKa = 11.84LSDD944 pKa = 5.27DD945 pKa = 3.66ILLMGDD951 pKa = 3.78DD952 pKa = 4.49DD953 pKa = 6.52FGGFWMINLTTDD965 pKa = 2.78EE966 pKa = 4.32KK967 pKa = 11.28LLYY970 pKa = 10.19RR971 pKa = 4.69

Molecular weight: 105.69 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|E1SRV5|E1SRV5_FERBD DNA mismatch repair protein MutH OS=Ferrimonas balearica (strain DSM 9799 / CCM 4581 / KCTC 23876 / PAT) OX=550540 GN=mutH PE=3 SV=1
MM1 pKa = 7.45KK2 pKa = 9.51RR3 pKa = 11.84TFQPSVLKK11 pKa = 10.46RR12 pKa = 11.84KK13 pKa = 9.37RR14 pKa = 11.84NHH16 pKa = 5.37GFRR19 pKa = 11.84ARR21 pKa = 11.84MATKK25 pKa = 10.4NGRR28 pKa = 11.84QVLARR33 pKa = 11.84RR34 pKa = 11.84RR35 pKa = 11.84AKK37 pKa = 10.39GRR39 pKa = 11.84ARR41 pKa = 11.84LSAA44 pKa = 3.91

Molecular weight: 5.16 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

3781

0

3781

1264585

30

3058

334.5

36.78

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

10.712 ± 0.059

1.051 ± 0.016

5.671 ± 0.037

6.01 ± 0.039

3.54 ± 0.025

7.826 ± 0.035

2.378 ± 0.021

4.624 ± 0.029

3.377 ± 0.033

11.46 ± 0.067

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.596 ± 0.019

3.202 ± 0.027

4.78 ± 0.03

4.942 ± 0.038

5.934 ± 0.035

5.591 ± 0.031

5.035 ± 0.027

7.067 ± 0.036

1.446 ± 0.016

2.757 ± 0.023
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski