Canis familiaris papillomavirus 17

Taxonomy: Viruses; Monodnaviria; Shotokuvirae; Cossaviricota; Papovaviricetes; Zurhausenvirales; Papillomaviridae; Firstpapillomavirinae; Taupapillomavirus; Taupapillomavirus 1

Average proteome isoelectric point is 6.53

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 6 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A0U4JWN8|A0A0U4JWN8_9PAPI Regulatory protein E2 OS=Canis familiaris papillomavirus 17 OX=1778550 GN=E2 PE=3 SV=1
MM1 pKa = 7.09QPTMRR6 pKa = 11.84AKK8 pKa = 9.8RR9 pKa = 11.84VKK11 pKa = 10.08RR12 pKa = 11.84ASAEE16 pKa = 3.9QLYY19 pKa = 7.93KK20 pKa = 10.26TCQQGGDD27 pKa = 4.38CIPDD31 pKa = 3.22VVAKK35 pKa = 10.64YY36 pKa = 7.32EE37 pKa = 4.27HH38 pKa = 6.89KK39 pKa = 9.8TPADD43 pKa = 4.14KK44 pKa = 10.45ILQIGGSVIYY54 pKa = 10.68LGGLSIGTGKK64 pKa = 8.72GTGGSTGYY72 pKa = 10.33RR73 pKa = 11.84PLGVDD78 pKa = 3.33VNASTTRR85 pKa = 11.84PVLPRR90 pKa = 11.84PAIPTEE96 pKa = 4.18TIGVDD101 pKa = 3.32VGSGTVSAGEE111 pKa = 3.94SSIIPLLEE119 pKa = 4.69AGAGGDD125 pKa = 3.47AVTISPEE132 pKa = 4.0VPTITEE138 pKa = 4.17DD139 pKa = 3.98LVINPSSGAPTVTTAAGEE157 pKa = 4.53GEE159 pKa = 4.49SVAVLEE165 pKa = 4.7VGTTPSTNSRR175 pKa = 11.84VTSTSQHH182 pKa = 5.59TNPSFTPVFHH192 pKa = 6.72STPQPGEE199 pKa = 3.72ASTLEE204 pKa = 4.4SIVVGHH210 pKa = 5.21STGGRR215 pKa = 11.84VVDD218 pKa = 4.39VYY220 pKa = 11.28EE221 pKa = 5.16EE222 pKa = 4.27IPLDD226 pKa = 3.77DD227 pKa = 5.03FGPSEE232 pKa = 5.09FEE234 pKa = 4.56IEE236 pKa = 4.35DD237 pKa = 3.64PTPRR241 pKa = 11.84TSTPRR246 pKa = 11.84SAVTNLVQRR255 pKa = 11.84ARR257 pKa = 11.84QFYY260 pKa = 9.4NRR262 pKa = 11.84RR263 pKa = 11.84FAQVQVTNEE272 pKa = 3.86AFLSRR277 pKa = 11.84PASLVEE283 pKa = 4.2FEE285 pKa = 4.56NPAYY289 pKa = 10.13QPEE292 pKa = 4.35EE293 pKa = 4.16TVVFPAGSGEE303 pKa = 4.19PLAAPDD309 pKa = 4.33PDD311 pKa = 3.91FADD314 pKa = 3.24VRR316 pKa = 11.84VLNRR320 pKa = 11.84AVFQANPRR328 pKa = 11.84GGVRR332 pKa = 11.84VSRR335 pKa = 11.84LGTKK339 pKa = 8.05NTIRR343 pKa = 11.84LRR345 pKa = 11.84SGTHH349 pKa = 5.69IGGSTHH355 pKa = 5.97YY356 pKa = 10.13FYY358 pKa = 11.21DD359 pKa = 3.81LSSISLQPEE368 pKa = 3.66IEE370 pKa = 4.09LSVLGEE376 pKa = 3.99HH377 pKa = 6.41SGEE380 pKa = 4.18SEE382 pKa = 3.93IVLGSTTSTVIDD394 pKa = 3.73AVNVEE399 pKa = 4.34GTISVPEE406 pKa = 4.01EE407 pKa = 3.79DD408 pKa = 4.02VLLDD412 pKa = 3.85EE413 pKa = 4.39YY414 pKa = 11.87VEE416 pKa = 4.8DD417 pKa = 4.97FSHH420 pKa = 6.72SQLALSGGSRR430 pKa = 11.84SQSRR434 pKa = 11.84VVDD437 pKa = 3.25IPEE440 pKa = 4.06FQRR443 pKa = 11.84EE444 pKa = 4.23VPKK447 pKa = 10.93GSVIIDD453 pKa = 3.89DD454 pKa = 4.77LSDD457 pKa = 4.36SIHH460 pKa = 5.73VAHH463 pKa = 7.22PGGRR467 pKa = 11.84DD468 pKa = 3.05TTAEE472 pKa = 4.21PFSPPHH478 pKa = 6.8SSDD481 pKa = 3.68VPSSSSDD488 pKa = 3.54SVSSTFDD495 pKa = 3.1LHH497 pKa = 7.06PSLLKK502 pKa = 9.84RR503 pKa = 11.84RR504 pKa = 11.84KK505 pKa = 9.48RR506 pKa = 11.84KK507 pKa = 10.22RR508 pKa = 11.84GDD510 pKa = 2.76II511 pKa = 3.87

Molecular weight: 54.1 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A0U4K543|A0A0U4K543_9PAPI Protein E6 OS=Canis familiaris papillomavirus 17 OX=1778550 GN=E6 PE=3 SV=1
MM1 pKa = 7.22MEE3 pKa = 4.25ALVRR7 pKa = 11.84RR8 pKa = 11.84CDD10 pKa = 3.56VLQEE14 pKa = 4.46VILQHH19 pKa = 5.74YY20 pKa = 8.31EE21 pKa = 3.91RR22 pKa = 11.84GSHH25 pKa = 6.99KK26 pKa = 10.84LSDD29 pKa = 3.29QCNYY33 pKa = 9.49WEE35 pKa = 4.02ATRR38 pKa = 11.84RR39 pKa = 11.84EE40 pKa = 4.14STLLHH45 pKa = 6.43FARR48 pKa = 11.84KK49 pKa = 9.21NRR51 pKa = 11.84IHH53 pKa = 7.13RR54 pKa = 11.84LGVIPVPALATTEE67 pKa = 4.32ANAKK71 pKa = 9.9KK72 pKa = 9.93AIQMCLVLSSLNQSPYY88 pKa = 10.12RR89 pKa = 11.84DD90 pKa = 4.35EE91 pKa = 4.49PWTMTDD97 pKa = 2.9TSRR100 pKa = 11.84EE101 pKa = 3.91MWEE104 pKa = 4.45APPKK108 pKa = 10.49GCLKK112 pKa = 10.67KK113 pKa = 10.95GGVTVDD119 pKa = 3.23VLFDD123 pKa = 4.02GDD125 pKa = 4.15PNNVFPYY132 pKa = 9.29TLWSYY137 pKa = 11.14IYY139 pKa = 9.79YY140 pKa = 10.55QNLNDD145 pKa = 3.63EE146 pKa = 4.72WIKK149 pKa = 11.04VPGKK153 pKa = 10.19VDD155 pKa = 3.53YY156 pKa = 10.97EE157 pKa = 4.09GLYY160 pKa = 8.79YY161 pKa = 10.33TDD163 pKa = 4.02EE164 pKa = 5.82DD165 pKa = 4.29GEE167 pKa = 4.38KK168 pKa = 9.59IYY170 pKa = 11.08YY171 pKa = 8.94EE172 pKa = 4.18QFAKK176 pKa = 10.87DD177 pKa = 3.27AMRR180 pKa = 11.84FGNTGTWKK188 pKa = 9.91VRR190 pKa = 11.84YY191 pKa = 9.45KK192 pKa = 10.26NTVLSALVSSSGSSWPTSAPTSNSATASTTTAQRR226 pKa = 11.84EE227 pKa = 4.71GPTDD231 pKa = 3.69TPASSATSSSVSSACSSTSTGNRR254 pKa = 11.84GGPGQLIVSEE264 pKa = 4.38SQQGGSEE271 pKa = 4.17GGRR274 pKa = 11.84GRR276 pKa = 11.84GRR278 pKa = 11.84GRR280 pKa = 11.84GRR282 pKa = 11.84GRR284 pKa = 11.84GKK286 pKa = 10.56RR287 pKa = 11.84GGSPSPPLFVHH298 pKa = 6.59SDD300 pKa = 3.35WGCRR304 pKa = 11.84EE305 pKa = 3.89PQGSEE310 pKa = 3.22KK311 pKa = 10.29RR312 pKa = 11.84ARR314 pKa = 11.84EE315 pKa = 3.92ASSDD319 pKa = 3.78GEE321 pKa = 5.34DD322 pKa = 3.15RR323 pKa = 11.84ATWGGGRR330 pKa = 11.84EE331 pKa = 3.7RR332 pKa = 11.84RR333 pKa = 11.84AGQGEE338 pKa = 4.17RR339 pKa = 11.84PSCSSCNLSPNPSTIPTLSTPGPTPGHH366 pKa = 5.33GHH368 pKa = 7.03GGRR371 pKa = 11.84PTPKK375 pKa = 10.26APRR378 pKa = 11.84LSPAVPLEE386 pKa = 3.88QLVQRR391 pKa = 11.84PGDD394 pKa = 3.5FEE396 pKa = 4.73TEE398 pKa = 3.72VGRR401 pKa = 11.84RR402 pKa = 11.84PRR404 pKa = 11.84GPEE407 pKa = 3.81GQNRR411 pKa = 11.84PYY413 pKa = 10.47PVIIVKK419 pKa = 10.7GDD421 pKa = 3.42GNASKK426 pKa = 10.44CWRR429 pKa = 11.84RR430 pKa = 11.84RR431 pKa = 11.84LRR433 pKa = 11.84LRR435 pKa = 11.84YY436 pKa = 9.82GEE438 pKa = 5.19LYY440 pKa = 9.78TAISTGFSWTTANGPHH456 pKa = 6.22RR457 pKa = 11.84VCRR460 pKa = 11.84PRR462 pKa = 11.84MVIAFDD468 pKa = 3.93SDD470 pKa = 3.4EE471 pKa = 3.85QRR473 pKa = 11.84AAFLKK478 pKa = 10.31NVRR481 pKa = 11.84IPKK484 pKa = 9.95VLDD487 pKa = 3.1IAFGSLDD494 pKa = 3.52SLL496 pKa = 4.34

Molecular weight: 54.42 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

6

0

6

2006

98

511

334.3

36.88

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

5.334 ± 0.479

2.293 ± 0.79

5.733 ± 0.487

6.431 ± 0.568

3.24 ± 0.453

8.475 ± 0.737

2.044 ± 0.359

4.038 ± 0.409

4.487 ± 0.922

7.527 ± 0.574

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.496 ± 0.407

3.639 ± 0.741

8.624 ± 1.438

3.789 ± 0.434

7.228 ± 0.834

8.225 ± 1.338

6.78 ± 0.787

6.73 ± 1.234

1.196 ± 0.394

2.692 ± 0.626
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski