Ornithinimicrobium cerasi

Taxonomy: cellular organisms; Bacteria; Terrabacteria group; Actinobacteria; Actinomycetia; Micrococcales; Ornithinimicrobiaceae; Ornithinimicrobium

Average proteome isoelectric point is 6.04

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 3368 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A285VPA4|A0A285VPA4_9MICO Proteasome accessory factor C OS=Ornithinimicrobium cerasi OX=2248773 GN=SAMN05421879_103127 PE=4 SV=1
MM1 pKa = 7.96RR2 pKa = 11.84NRR4 pKa = 11.84SVGALASAAALALLLTSCAEE24 pKa = 4.15SDD26 pKa = 4.41RR27 pKa = 11.84DD28 pKa = 3.85TGDD31 pKa = 4.43DD32 pKa = 3.95GDD34 pKa = 4.32GAPAGTDD41 pKa = 2.84NATGTEE47 pKa = 4.09PAAGGDD53 pKa = 4.22DD54 pKa = 3.84GASDD58 pKa = 3.47ATFVFGAAGAPTTFDD73 pKa = 3.41PFYY76 pKa = 10.83ASDD79 pKa = 3.89GEE81 pKa = 4.57TFRR84 pKa = 11.84VTRR87 pKa = 11.84QIFQNLIGIEE97 pKa = 4.15EE98 pKa = 4.7GGSEE102 pKa = 4.56AVPEE106 pKa = 4.6LATSWEE112 pKa = 4.35SEE114 pKa = 4.48DD115 pKa = 3.63GLVWDD120 pKa = 5.03FAIQEE125 pKa = 4.44GVTFHH130 pKa = 7.79DD131 pKa = 4.43GTPLDD136 pKa = 4.36AEE138 pKa = 4.32AVCANFTRR146 pKa = 11.84WADD149 pKa = 3.53QNEE152 pKa = 4.38AGQSPSGAYY161 pKa = 10.26YY162 pKa = 10.1YY163 pKa = 11.4GNDD166 pKa = 3.25FGFGEE171 pKa = 4.41DD172 pKa = 4.31SLYY175 pKa = 10.66EE176 pKa = 4.13SCEE179 pKa = 3.95ATDD182 pKa = 3.74EE183 pKa = 4.1LTAQVTVSRR192 pKa = 11.84VTGKK196 pKa = 10.49FPMVLSQSSYY206 pKa = 11.1AIQSPTAMDD215 pKa = 4.01EE216 pKa = 3.9YY217 pKa = 10.69DD218 pKa = 3.55ANGIALEE225 pKa = 4.46GEE227 pKa = 3.91AFVFPEE233 pKa = 4.11YY234 pKa = 10.63AQEE237 pKa = 4.44HH238 pKa = 5.6PTGTGPFMFEE248 pKa = 4.39SYY250 pKa = 11.19DD251 pKa = 3.6NAGGSVTLTRR261 pKa = 11.84NDD263 pKa = 4.79DD264 pKa = 3.57YY265 pKa = 11.2WGDD268 pKa = 3.51PAGVSEE274 pKa = 4.28IVFRR278 pKa = 11.84IIPDD282 pKa = 3.23EE283 pKa = 3.75NARR286 pKa = 11.84RR287 pKa = 11.84QEE289 pKa = 4.13LEE291 pKa = 3.65AGTINGYY298 pKa = 9.2DD299 pKa = 3.71LPNPVDD305 pKa = 3.37WQALEE310 pKa = 4.38DD311 pKa = 4.17AGNQVLIRR319 pKa = 11.84DD320 pKa = 4.45PFNILYY326 pKa = 10.26LALNPVADD334 pKa = 4.48PQLEE338 pKa = 4.38DD339 pKa = 3.62PLVRR343 pKa = 11.84QALYY347 pKa = 10.27HH348 pKa = 6.02ALNRR352 pKa = 11.84QQFVTSQLPAGAEE365 pKa = 4.06VATQFMPSTVSGWSSGIDD383 pKa = 2.99AYY385 pKa = 10.52EE386 pKa = 3.93YY387 pKa = 10.7DD388 pKa = 3.74VEE390 pKa = 4.26KK391 pKa = 11.08ARR393 pKa = 11.84DD394 pKa = 3.67LLEE397 pKa = 4.04QAGKK401 pKa = 10.5SDD403 pKa = 3.6LTIEE407 pKa = 4.21LWYY410 pKa = 9.4PSEE413 pKa = 4.0VTRR416 pKa = 11.84PYY418 pKa = 10.19MPDD421 pKa = 2.98PTRR424 pKa = 11.84VYY426 pKa = 10.98DD427 pKa = 3.68AVKK430 pKa = 10.61ADD432 pKa = 3.51WEE434 pKa = 4.27AAGITVEE441 pKa = 4.5TVTKK445 pKa = 8.82PWAGGYY451 pKa = 9.64IDD453 pKa = 4.97DD454 pKa = 4.6TQASRR459 pKa = 11.84APAFFLGWTGDD470 pKa = 3.82LNSADD475 pKa = 3.93NFLCAFFCGDD485 pKa = 3.94DD486 pKa = 3.78NQFGTSAYY494 pKa = 9.85DD495 pKa = 3.08WHH497 pKa = 7.45EE498 pKa = 4.35DD499 pKa = 3.48LQEE502 pKa = 4.08QIAAADD508 pKa = 3.82AEE510 pKa = 4.4ADD512 pKa = 3.49EE513 pKa = 4.46ATRR516 pKa = 11.84TGLYY520 pKa = 10.06EE521 pKa = 4.27SLNEE525 pKa = 4.68AIMSPEE531 pKa = 4.11WLPGLPISHH540 pKa = 6.89SPPAIVVGEE549 pKa = 4.08NVQGLVASPLTAEE562 pKa = 4.84DD563 pKa = 4.57FSTVTITEE571 pKa = 3.98

Molecular weight: 61.46 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A285VUX1|A0A285VUX1_9MICO Lysophospholipase L1 OS=Ornithinimicrobium cerasi OX=2248773 GN=SAMN05421879_11721 PE=4 SV=1
MM1 pKa = 7.4GSVIKK6 pKa = 10.42KK7 pKa = 8.47RR8 pKa = 11.84RR9 pKa = 11.84KK10 pKa = 9.22RR11 pKa = 11.84MAKK14 pKa = 9.41KK15 pKa = 9.87KK16 pKa = 9.7HH17 pKa = 5.84RR18 pKa = 11.84KK19 pKa = 8.56LLRR22 pKa = 11.84KK23 pKa = 7.78TRR25 pKa = 11.84HH26 pKa = 3.65QRR28 pKa = 11.84RR29 pKa = 11.84NKK31 pKa = 9.78KK32 pKa = 9.85

Molecular weight: 4.08 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

3368

0

3368

1132626

27

2986

336.3

35.96

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

12.954 ± 0.057

0.638 ± 0.011

6.374 ± 0.038

6.034 ± 0.039

2.444 ± 0.025

9.65 ± 0.042

2.291 ± 0.02

2.78 ± 0.03

1.356 ± 0.026

10.672 ± 0.057

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.805 ± 0.016

1.45 ± 0.024

5.961 ± 0.036

2.868 ± 0.023

8.157 ± 0.046

5.015 ± 0.026

6.135 ± 0.034

9.947 ± 0.047

1.64 ± 0.017

1.828 ± 0.021
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski