Ictalurid herpesvirus 2

Taxonomy: Viruses; Duplodnaviria; Heunggongvirae; Peploviricota; Herviviricetes; Herpesvirales; Alloherpesviridae; Ictalurivirus

Average proteome isoelectric point is 6.46

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 77 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A2H5AJF0|A0A2H5AJF0_9VIRU ORF11L OS=Ictalurid herpesvirus 2 OX=508441 PE=4 SV=1
MM1 pKa = 7.62ASNMARR7 pKa = 11.84AGHH10 pKa = 5.16VHH12 pKa = 6.3WCLQLFSEE20 pKa = 5.28LGPRR24 pKa = 11.84DD25 pKa = 4.16DD26 pKa = 5.1DD27 pKa = 3.92QSSSSSSSSGSSVSGDD43 pKa = 3.36TPDD46 pKa = 3.06WVSTILEE53 pKa = 4.26TSDD56 pKa = 5.47DD57 pKa = 4.69DD58 pKa = 4.71LSSMPSPVSDD68 pKa = 3.33RR69 pKa = 11.84TSSAFSWASDD79 pKa = 3.9DD80 pKa = 5.0EE81 pKa = 4.91EE82 pKa = 6.96GDD84 pKa = 3.7DD85 pKa = 5.45DD86 pKa = 4.85VFEE89 pKa = 4.52AAPGGSWSEE98 pKa = 3.75RR99 pKa = 11.84TPAEE103 pKa = 4.1VEE105 pKa = 3.85VRR107 pKa = 11.84TPGSSDD113 pKa = 3.87DD114 pKa = 3.83EE115 pKa = 4.89VVCLGVVEE123 pKa = 4.3KK124 pKa = 11.05VRR126 pKa = 11.84LVRR129 pKa = 11.84EE130 pKa = 4.1GGVWRR135 pKa = 11.84VAEE138 pKa = 4.18RR139 pKa = 11.84RR140 pKa = 11.84VEE142 pKa = 4.22APTPYY147 pKa = 9.92PWANPEE153 pKa = 3.97EE154 pKa = 4.33PTAEE158 pKa = 4.03DD159 pKa = 4.42FFTEE163 pKa = 4.45FAEE166 pKa = 4.48FDD168 pKa = 3.89EE169 pKa = 5.2LDD171 pKa = 3.62EE172 pKa = 4.43LAAAIANTPGSPSQYY187 pKa = 10.11SPPSPDD193 pKa = 3.43PSHH196 pKa = 7.89HH197 pKa = 6.32EE198 pKa = 4.15DD199 pKa = 3.61EE200 pKa = 5.04YY201 pKa = 11.4EE202 pKa = 4.21NPPSPTDD209 pKa = 3.58YY210 pKa = 11.16SPTSPRR216 pKa = 11.84RR217 pKa = 11.84EE218 pKa = 4.23SLDD221 pKa = 3.48EE222 pKa = 4.0EE223 pKa = 4.54APAYY227 pKa = 10.78SPITSPEE234 pKa = 3.25WDD236 pKa = 3.71YY237 pKa = 10.65EE238 pKa = 4.31TRR240 pKa = 11.84ASPRR244 pKa = 11.84APEE247 pKa = 3.94VAEE250 pKa = 4.14VAEE253 pKa = 4.3VAPTRR258 pKa = 11.84GFHH261 pKa = 5.91MGPLLSDD268 pKa = 3.24AWVSYY273 pKa = 10.86EE274 pKa = 4.06EE275 pKa = 4.18YY276 pKa = 11.23ANDD279 pKa = 4.5FIMDD283 pKa = 3.75YY284 pKa = 9.29RR285 pKa = 11.84TLYY288 pKa = 9.95HH289 pKa = 5.99PHH291 pKa = 7.52RR292 pKa = 11.84DD293 pKa = 3.6TPYY296 pKa = 10.68SPDD299 pKa = 3.02EE300 pKa = 4.16RR301 pKa = 11.84RR302 pKa = 11.84AGEE305 pKa = 4.39TPHH308 pKa = 6.81GPYY311 pKa = 10.47VPDD314 pKa = 3.87SPVAGPSRR322 pKa = 11.84KK323 pKa = 9.26RR324 pKa = 11.84GRR326 pKa = 11.84KK327 pKa = 9.67GEE329 pKa = 4.3TKK331 pKa = 10.36GAPPKK336 pKa = 10.47KK337 pKa = 9.6KK338 pKa = 10.43ALVEE342 pKa = 4.16GWDD345 pKa = 3.82EE346 pKa = 3.89DD347 pKa = 3.92WEE349 pKa = 5.64AEE351 pKa = 4.11LQRR354 pKa = 11.84IRR356 pKa = 11.84DD357 pKa = 4.14GYY359 pKa = 9.66MGTPITRR366 pKa = 11.84HH367 pKa = 6.44DD368 pKa = 4.44LLPATVEE375 pKa = 3.59ICPISNCFFSGLKK388 pKa = 10.25PEE390 pKa = 4.33INGPTVCKK398 pKa = 10.35CAICKK403 pKa = 9.91HH404 pKa = 6.59DD405 pKa = 4.06GQCLCLARR413 pKa = 11.84CARR416 pKa = 11.84NCPDD420 pKa = 3.81YY421 pKa = 11.38EE422 pKa = 4.5CTCVDD427 pKa = 2.96IATDD431 pKa = 3.56NGRR434 pKa = 11.84DD435 pKa = 3.75PNPIFDD441 pKa = 5.02PEE443 pKa = 3.95DD444 pKa = 3.42TRR446 pKa = 11.84NFFIDD451 pKa = 3.16EE452 pKa = 4.23CLAKK456 pKa = 10.79GLTDD460 pKa = 3.9EE461 pKa = 4.47VASDD465 pKa = 4.17LFTAKK470 pKa = 9.45TLAFQIRR477 pKa = 11.84NEE479 pKa = 4.04TRR481 pKa = 11.84LKK483 pKa = 10.88EE484 pKa = 3.93LDD486 pKa = 3.5NAA488 pKa = 4.47

Molecular weight: 53.86 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A2H5AJI0|A0A2H5AJI0_9VIRU ORF41 OS=Ictalurid herpesvirus 2 OX=508441 PE=4 SV=1
MM1 pKa = 7.51TFQFNCWDD9 pKa = 5.16PILDD13 pKa = 5.22DD14 pKa = 3.58ISKK17 pKa = 8.71TIQIATVDD25 pKa = 4.12RR26 pKa = 11.84QPPTYY31 pKa = 9.4WNYY34 pKa = 8.27ITAEE38 pKa = 3.88TGMRR42 pKa = 11.84GYY44 pKa = 10.84EE45 pKa = 3.92LFGYY49 pKa = 9.73PSLTQSGTIPGSPWRR64 pKa = 11.84PEE66 pKa = 3.63MSTLSWPVPATSVHH80 pKa = 6.51EE81 pKa = 4.09DD82 pKa = 3.3VIMAEE87 pKa = 4.32PKK89 pKa = 10.59VPIQPRR95 pKa = 11.84QHH97 pKa = 5.73RR98 pKa = 11.84RR99 pKa = 11.84RR100 pKa = 11.84RR101 pKa = 11.84RR102 pKa = 11.84SRR104 pKa = 11.84GAGRR108 pKa = 11.84KK109 pKa = 8.68SVHH112 pKa = 6.19ALAPVWSTPSPGTAVRR128 pKa = 11.84QVPQEE133 pKa = 3.93QRR135 pKa = 11.84QQPPTPIKK143 pKa = 9.74TGSLKK148 pKa = 11.03SPGAPKK154 pKa = 10.24SPRR157 pKa = 11.84VKK159 pKa = 10.38RR160 pKa = 11.84GVTFADD166 pKa = 3.21ACTIVQFDD174 pKa = 4.82RR175 pKa = 11.84EE176 pKa = 4.24DD177 pKa = 3.53QPDD180 pKa = 3.94VVHH183 pKa = 6.39GAPRR187 pKa = 11.84GRR189 pKa = 11.84VALRR193 pKa = 11.84PPNLL197 pKa = 3.4

Molecular weight: 21.98 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

77

0

77

35900

120

1629

466.2

51.94

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

7.12 ± 0.198

1.71 ± 0.131

5.457 ± 0.15

6.209 ± 0.28

3.836 ± 0.178

7.061 ± 0.154

2.32 ± 0.098

5.855 ± 0.199

4.591 ± 0.266

9.365 ± 0.197

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.922 ± 0.107

3.454 ± 0.131

6.17 ± 0.34

2.986 ± 0.137

6.345 ± 0.215

6.003 ± 0.209

7.437 ± 0.181

6.981 ± 0.127

1.276 ± 0.088

2.903 ± 0.143
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski