Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1)

Taxonomy: cellular organisms; Eukaryota; Opisthokonta; Fungi; Dikarya; Ascomycota; saccharomyceta; Pezizomycotina; leotiomyceta; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus subgen. Fumigati; Aspergillus clavatus

Average proteome isoelectric point is 6.47

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 9140 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A1CI20|A1CI20_ASPCL 40S ribosomal protein S6 OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1) OX=344612 GN=ACLA_049970 PE=3 SV=1
MM1 pKa = 7.75ADD3 pKa = 3.62EE4 pKa = 4.98ALSIYY9 pKa = 10.61DD10 pKa = 3.89EE11 pKa = 4.51IEE13 pKa = 4.22IEE15 pKa = 5.63DD16 pKa = 3.82MVFDD20 pKa = 4.99PNLQIYY26 pKa = 9.03HH27 pKa = 5.7YY28 pKa = 8.84PCPCGDD34 pKa = 3.52RR35 pKa = 11.84FEE37 pKa = 4.77IAIDD41 pKa = 3.76DD42 pKa = 4.15LRR44 pKa = 11.84DD45 pKa = 3.75GEE47 pKa = 5.2DD48 pKa = 2.94IAVCPSCSLMIRR60 pKa = 11.84VIFDD64 pKa = 3.44ASDD67 pKa = 3.39LPKK70 pKa = 10.84DD71 pKa = 3.87GNQPVPGAVSVQAA84 pKa = 4.47

Molecular weight: 9.28 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A1C9Z0|A1C9Z0_ASPCL SUN domain-containing protein OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1) OX=344612 GN=ACLA_009810 PE=4 SV=1
MM1 pKa = 7.28TKK3 pKa = 10.45GNKK6 pKa = 6.51SHH8 pKa = 7.22KK9 pKa = 10.13SFRR12 pKa = 11.84TKK14 pKa = 10.45QKK16 pKa = 9.54LAKK19 pKa = 9.74AQRR22 pKa = 11.84QNRR25 pKa = 11.84PIPQWIRR32 pKa = 11.84LRR34 pKa = 11.84TGNTIRR40 pKa = 11.84YY41 pKa = 5.79NAKK44 pKa = 8.89RR45 pKa = 11.84RR46 pKa = 11.84HH47 pKa = 4.14WRR49 pKa = 11.84KK50 pKa = 7.41TRR52 pKa = 11.84LGII55 pKa = 4.46

Molecular weight: 6.71 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

9140

0

9140

4507684

42

8202

493.2

54.58

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

8.753 ± 0.025

1.19 ± 0.009

5.641 ± 0.015

6.238 ± 0.031

3.696 ± 0.015

6.724 ± 0.024

2.419 ± 0.01

4.861 ± 0.017

4.624 ± 0.025

9.136 ± 0.029

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.143 ± 0.009

3.529 ± 0.012

6.113 ± 0.029

4.095 ± 0.015

6.277 ± 0.023

8.347 ± 0.028

5.853 ± 0.021

6.191 ± 0.017

1.413 ± 0.009

2.755 ± 0.013
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski