Stylophora pistillata (Smooth cauliflower coral)

Taxonomy: cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Cnidaria; Anthozoa; Hexacorallia; Scleractinia; Astrocoeniina; Pocilloporidae; Stylophora

Average proteome isoelectric point is 6.69

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 24067 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A2B4SQ96|A0A2B4SQ96_STYPI Protein notum-like OS=Stylophora pistillata OX=50429 GN=Notum PE=3 SV=1
MM1 pKa = 7.16EE2 pKa = 4.59TFSNRR7 pKa = 11.84EE8 pKa = 3.93LIEE11 pKa = 3.96ASKK14 pKa = 10.57MMNFVDD20 pKa = 5.39EE21 pKa = 4.51VPGWGSPYY29 pKa = 10.14CVEE32 pKa = 4.61GLPFLDD38 pKa = 4.05GTQVVPEE45 pKa = 4.24MTAQDD50 pKa = 4.0LDD52 pKa = 4.41GYY54 pKa = 10.32PPMQLDD60 pKa = 3.92GEE62 pKa = 4.44EE63 pKa = 4.27SKK65 pKa = 11.06SRR67 pKa = 11.84SDD69 pKa = 5.41GVTSWKK75 pKa = 10.24SCSSLTDD82 pKa = 3.36HH83 pKa = 6.96EE84 pKa = 4.91SGYY87 pKa = 11.22SSDD90 pKa = 3.81EE91 pKa = 4.2SASPRR96 pKa = 11.84MDD98 pKa = 3.23EE99 pKa = 5.03ALPSPANNCLDD110 pKa = 4.29LDD112 pKa = 4.07QNTTPGLMEE121 pKa = 4.53CLGPTEE127 pKa = 5.25DD128 pKa = 3.43WFNYY132 pKa = 8.98PPYY135 pKa = 9.56TWTAAQLEE143 pKa = 4.66SFLKK147 pKa = 10.33SVRR150 pKa = 11.84EE151 pKa = 4.15SYY153 pKa = 10.71NIPGEE158 pKa = 4.2CDD160 pKa = 3.41LEE162 pKa = 4.81KK163 pKa = 10.92LDD165 pKa = 4.48LTGPEE170 pKa = 4.62LWCSTADD177 pKa = 3.47DD178 pKa = 4.09LKK180 pKa = 11.16RR181 pKa = 11.84RR182 pKa = 11.84TEE184 pKa = 3.98YY185 pKa = 11.55GEE187 pKa = 4.23LLYY190 pKa = 10.62EE191 pKa = 4.8ALNQFPSNSQWEE203 pKa = 4.7SNSTSCGGYY212 pKa = 9.66KK213 pKa = 10.38DD214 pKa = 4.12PSSDD218 pKa = 3.99EE219 pKa = 4.02MFNLQILAEE228 pKa = 4.2QDD230 pKa = 3.52PSSSPFLDD238 pKa = 3.96DD239 pKa = 5.3LPVEE243 pKa = 4.79GKK245 pKa = 8.01TLSHH249 pKa = 6.18LTIPQIILL257 pKa = 3.3

Molecular weight: 28.59 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A2B4S848|A0A2B4S848_STYPI Uncharacterized protein OS=Stylophora pistillata OX=50429 GN=AWC38_SpisGene10595 PE=4 SV=1
MM1 pKa = 7.26KK2 pKa = 10.53VAGKK6 pKa = 9.52SQLSRR11 pKa = 11.84KK12 pKa = 9.11KK13 pKa = 10.18VARR16 pKa = 11.84KK17 pKa = 9.05SQLSRR22 pKa = 11.84KK23 pKa = 8.89KK24 pKa = 10.18VARR27 pKa = 11.84KK28 pKa = 9.05SQLSRR33 pKa = 11.84KK34 pKa = 8.89KK35 pKa = 10.18VARR38 pKa = 11.84KK39 pKa = 9.05SQLSRR44 pKa = 11.84KK45 pKa = 8.89KK46 pKa = 10.18VARR49 pKa = 11.84KK50 pKa = 9.05SQLSRR55 pKa = 11.84KK56 pKa = 8.89KK57 pKa = 10.14VARR60 pKa = 11.84KK61 pKa = 8.62SQPSRR66 pKa = 11.84KK67 pKa = 9.07KK68 pKa = 9.99VARR71 pKa = 11.84KK72 pKa = 9.05SQLSRR77 pKa = 11.84KK78 pKa = 8.89KK79 pKa = 10.18VARR82 pKa = 11.84KK83 pKa = 9.05SQLSRR88 pKa = 11.84KK89 pKa = 8.89KK90 pKa = 10.18VARR93 pKa = 11.84KK94 pKa = 9.05SQLSRR99 pKa = 11.84KK100 pKa = 8.89KK101 pKa = 10.18VARR104 pKa = 11.84KK105 pKa = 9.05SQLSRR110 pKa = 11.84KK111 pKa = 8.89KK112 pKa = 10.18VARR115 pKa = 11.84KK116 pKa = 9.05SQLSGKK122 pKa = 9.56KK123 pKa = 8.19VARR126 pKa = 11.84KK127 pKa = 9.05SQLSRR132 pKa = 11.84KK133 pKa = 8.89KK134 pKa = 10.18VARR137 pKa = 11.84KK138 pKa = 9.05SQLSRR143 pKa = 11.84KK144 pKa = 8.89KK145 pKa = 10.18VARR148 pKa = 11.84KK149 pKa = 9.05SQLSRR154 pKa = 11.84KK155 pKa = 8.89KK156 pKa = 10.18VARR159 pKa = 11.84KK160 pKa = 9.05SQLSRR165 pKa = 11.84KK166 pKa = 8.89KK167 pKa = 10.18VARR170 pKa = 11.84KK171 pKa = 9.05SQLSRR176 pKa = 11.84KK177 pKa = 8.89KK178 pKa = 10.18VARR181 pKa = 11.84KK182 pKa = 9.05SQLSRR187 pKa = 11.84KK188 pKa = 8.89KK189 pKa = 10.18VARR192 pKa = 11.84KK193 pKa = 9.05SQLSRR198 pKa = 11.84KK199 pKa = 8.89KK200 pKa = 10.18VARR203 pKa = 11.84KK204 pKa = 9.05SQLSRR209 pKa = 11.84KK210 pKa = 8.89KK211 pKa = 10.18VARR214 pKa = 11.84KK215 pKa = 9.05SQLSRR220 pKa = 11.84KK221 pKa = 9.91KK222 pKa = 10.11EE223 pKa = 4.13DD224 pKa = 3.49CSKK227 pKa = 10.93AAPP230 pKa = 3.71

Molecular weight: 26.52 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

24067

0

24067

14677808

31

15904

609.9

68.59

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.135 ± 0.011

2.158 ± 0.016

5.635 ± 0.013

7.131 ± 0.024

3.986 ± 0.011

6.044 ± 0.022

2.357 ± 0.007

5.124 ± 0.011

6.955 ± 0.014

8.997 ± 0.02

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.089 ± 0.006

4.648 ± 0.011

4.623 ± 0.018

4.097 ± 0.012

5.501 ± 0.015

8.19 ± 0.019

5.727 ± 0.012

6.494 ± 0.013

1.191 ± 0.005

2.916 ± 0.009
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski