Lymantria dispar cypovirus 1 (isolate Rao) (LdCPV-1)

Taxonomy: Viruses; Riboviria; Orthornavirae; Duplornaviricota; Resentoviricetes; Reovirales; Reoviridae; Spinareovirinae; Cypovirus; Cypovirus 1; Lymantria dispar cypovirus 1

Average proteome isoelectric point is 6.13

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 10 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    

Protein with the lowest isoelectric point:
>sp|Q91IE0|RDRP_LDCPR RNA-directed RNA polymerase VP2 OS=Lymantria dispar cypovirus 1 (isolate Rao) OX=648169 GN=S2 PE=3 SV=1
MM1 pKa = 7.8EE2 pKa = 5.25INRR5 pKa = 11.84AEE7 pKa = 3.92IRR9 pKa = 11.84RR10 pKa = 11.84EE11 pKa = 3.4ITRR14 pKa = 11.84YY15 pKa = 10.16AGLIEE20 pKa = 4.38QQTQINITDD29 pKa = 3.6NDD31 pKa = 3.28QDD33 pKa = 3.6ILKK36 pKa = 9.07TLIADD41 pKa = 3.38YY42 pKa = 10.11NLRR45 pKa = 11.84MRR47 pKa = 11.84RR48 pKa = 11.84DD49 pKa = 3.38ALLGEE54 pKa = 4.63LARR57 pKa = 11.84LDD59 pKa = 3.87EE60 pKa = 5.09LRR62 pKa = 11.84DD63 pKa = 3.31ISQIKK68 pKa = 9.22GDD70 pKa = 4.15EE71 pKa = 4.21YY72 pKa = 11.58KK73 pKa = 10.23LTIPLLPIISTLNQHH88 pKa = 5.82EE89 pKa = 4.37FEE91 pKa = 5.45IIQANIEE98 pKa = 3.95TDD100 pKa = 4.76FIADD104 pKa = 3.29NVTFITSFIPADD116 pKa = 3.9LDD118 pKa = 3.76LEE120 pKa = 4.3QTIQHH125 pKa = 5.1VFFRR129 pKa = 11.84TTATTPYY136 pKa = 9.3FRR138 pKa = 11.84SFNLVIAILDD148 pKa = 3.69YY149 pKa = 11.68DD150 pKa = 4.12EE151 pKa = 6.21DD152 pKa = 4.54KK153 pKa = 11.7GDD155 pKa = 3.28VKK157 pKa = 11.25LDD159 pKa = 3.41VKK161 pKa = 10.29ITITRR166 pKa = 11.84SNNGVFNYY174 pKa = 10.46NYY176 pKa = 8.37TWAGKK181 pKa = 9.9DD182 pKa = 3.44YY183 pKa = 10.43EE184 pKa = 4.53RR185 pKa = 11.84VSICYY190 pKa = 10.26NLISYY195 pKa = 7.52LQQINGPRR203 pKa = 11.84GRR205 pKa = 11.84DD206 pKa = 3.52DD207 pKa = 3.57EE208 pKa = 6.21AEE210 pKa = 3.99MPIYY214 pKa = 10.31EE215 pKa = 4.87IVRR218 pKa = 11.84QNNGSQPSYY227 pKa = 11.28ASGEE231 pKa = 3.89HH232 pKa = 6.21LYY234 pKa = 10.25IVSSHH239 pKa = 5.54LHH241 pKa = 5.12VDD243 pKa = 3.98EE244 pKa = 4.28IVRR247 pKa = 11.84DD248 pKa = 3.84RR249 pKa = 11.84EE250 pKa = 4.07HH251 pKa = 7.41RR252 pKa = 11.84DD253 pKa = 2.75ISVDD257 pKa = 3.54VTEE260 pKa = 5.09LNLMFPIVRR269 pKa = 11.84MFDD272 pKa = 3.47PVDD275 pKa = 3.57LRR277 pKa = 11.84DD278 pKa = 3.54IRR280 pKa = 11.84IEE282 pKa = 3.99DD283 pKa = 3.56VTPGIEE289 pKa = 3.88FTINMEE295 pKa = 3.67VSTYY299 pKa = 8.92LTEE302 pKa = 4.47LSGSHH307 pKa = 6.81VDD309 pKa = 3.56TQRR312 pKa = 11.84TIMNHH317 pKa = 4.95AEE319 pKa = 4.24KK320 pKa = 10.39IVGNYY325 pKa = 7.86TGQQWNVQSNMLSEE339 pKa = 4.28VRR341 pKa = 11.84TQKK344 pKa = 10.97LEE346 pKa = 4.13EE347 pKa = 4.2EE348 pKa = 4.48DD349 pKa = 3.46EE350 pKa = 4.37EE351 pKa = 4.13ARR353 pKa = 11.84QRR355 pKa = 11.84GDD357 pKa = 3.31YY358 pKa = 7.49TTSTLVQTMAQVSDD372 pKa = 4.38LFSSTILYY380 pKa = 10.0RR381 pKa = 11.84YY382 pKa = 10.3AEE384 pKa = 4.57AEE386 pKa = 3.88LDD388 pKa = 3.67NTVGAFEE395 pKa = 4.56LLRR398 pKa = 11.84PVMSIPTEE406 pKa = 4.17YY407 pKa = 10.24IHH409 pKa = 7.45DD410 pKa = 3.89GRR412 pKa = 11.84IGPITNISASASIVTSSNNGVGEE435 pKa = 3.82VRR437 pKa = 11.84NIFKK441 pKa = 10.47PIGDD445 pKa = 3.53QTINEE450 pKa = 3.85AHH452 pKa = 6.5FANVYY457 pKa = 11.05SNDD460 pKa = 2.94EE461 pKa = 3.84YY462 pKa = 11.44AIYY465 pKa = 10.73LRR467 pKa = 11.84FSYY470 pKa = 10.17RR471 pKa = 11.84QAPVQSEE478 pKa = 4.27TVYY481 pKa = 10.68LQQALPSMRR490 pKa = 11.84IVSPSSVSTTVSTALIGGNTIRR512 pKa = 11.84INCPIRR518 pKa = 11.84PHH520 pKa = 7.86RR521 pKa = 11.84EE522 pKa = 3.81DD523 pKa = 3.49NFVAGGVQIPRR534 pKa = 11.84QSTAVEE540 pKa = 3.65IHH542 pKa = 5.29VQEE545 pKa = 3.89ILIGYY550 pKa = 7.75RR551 pKa = 11.84QATTFPIDD559 pKa = 3.34TEE561 pKa = 4.46GRR563 pKa = 11.84LSLEE567 pKa = 3.75LMYY570 pKa = 11.09GLEE573 pKa = 4.17SRR575 pKa = 11.84SAVGNTMSPVRR586 pKa = 11.84FVTVNDD592 pKa = 4.14GEE594 pKa = 4.67FFGLTCPIDD603 pKa = 3.72LTLSTIVDD611 pKa = 3.7PASYY615 pKa = 10.61LSDD618 pKa = 3.27GVILVTTAFEE628 pKa = 4.37DD629 pKa = 3.53LRR631 pKa = 11.84GYY633 pKa = 10.96AWLATLGGDD642 pKa = 3.65WPRR645 pKa = 11.84TYY647 pKa = 10.57NSSMGAFNIFTGGDD661 pKa = 3.17INLSTEE667 pKa = 4.12YY668 pKa = 10.32GSEE671 pKa = 3.52MTYY674 pKa = 9.04TFKK677 pKa = 11.33VEE679 pKa = 4.22LPINYY684 pKa = 7.66MFNNMTISSHH694 pKa = 4.72NVPRR698 pKa = 11.84VPVLGVTYY706 pKa = 10.82ASIYY710 pKa = 9.37QDD712 pKa = 2.74SRR714 pKa = 11.84TDD716 pKa = 3.34LEE718 pKa = 4.03ARR720 pKa = 11.84RR721 pKa = 11.84FLQTLVFRR729 pKa = 11.84IHH731 pKa = 6.74GSWSARR737 pKa = 11.84VPYY740 pKa = 10.16PPGNLPTRR748 pKa = 11.84NTANQHH754 pKa = 4.71QDD756 pKa = 2.53IQQVINDD763 pKa = 4.73SIFQEE768 pKa = 4.21LDD770 pKa = 3.13RR771 pKa = 11.84LSDD774 pKa = 3.64EE775 pKa = 5.56LLDD778 pKa = 3.84LEE780 pKa = 4.86NRR782 pKa = 11.84LDD784 pKa = 3.46HH785 pKa = 7.34LEE787 pKa = 4.05RR788 pKa = 11.84QFEE791 pKa = 4.23MFIQSQEE798 pKa = 4.27SEE800 pKa = 3.45WWEE803 pKa = 3.49ILLNVVIDD811 pKa = 3.36ISIGYY816 pKa = 9.52FSTFAGDD823 pKa = 3.63ALKK826 pKa = 10.59NAQRR830 pKa = 11.84AITKK834 pKa = 9.92AVGYY838 pKa = 6.45TRR840 pKa = 11.84RR841 pKa = 11.84VLMTVTKK848 pKa = 9.57TMRR851 pKa = 11.84NGTIFTRR858 pKa = 11.84LLGAKK863 pKa = 9.24NLSGQALASLEE874 pKa = 4.2TLVEE878 pKa = 4.07SALRR882 pKa = 11.84SINMKK887 pKa = 9.71KK888 pKa = 10.1SRR890 pKa = 11.84FMRR893 pKa = 11.84GAEE896 pKa = 3.93PLYY899 pKa = 9.56KK900 pKa = 9.53TNKK903 pKa = 7.95VAQHH907 pKa = 6.45IDD909 pKa = 3.25NTEE912 pKa = 3.93KK913 pKa = 10.4MNMMMDD919 pKa = 3.49FSFANRR925 pKa = 11.84NNRR928 pKa = 11.84QNITADD934 pKa = 3.82TLSKK938 pKa = 9.8MHH940 pKa = 6.22TQNAHH945 pKa = 5.01GTSDD949 pKa = 3.83TILPAMRR956 pKa = 11.84VYY958 pKa = 10.47YY959 pKa = 10.39RR960 pKa = 11.84PLGFLDD966 pKa = 3.67KK967 pKa = 10.76RR968 pKa = 11.84VGDD971 pKa = 4.09ALHH974 pKa = 6.36TGITRR979 pKa = 11.84PEE981 pKa = 3.84ALKK984 pKa = 10.49KK985 pKa = 9.73QLRR988 pKa = 11.84SDD990 pKa = 3.66VANVGTRR997 pKa = 11.84APSHH1001 pKa = 6.6AFMTYY1006 pKa = 9.71TDD1008 pKa = 3.94VLYY1011 pKa = 10.46EE1012 pKa = 4.15DD1013 pKa = 3.98AGSYY1017 pKa = 9.77IVSKK1021 pKa = 10.3RR1022 pKa = 11.84YY1023 pKa = 10.23LGIGEE1028 pKa = 4.33LNKK1031 pKa = 10.33FGRR1034 pKa = 11.84TTSDD1038 pKa = 2.71KK1039 pKa = 10.31NAGIGGVNIKK1049 pKa = 10.52YY1050 pKa = 9.9RR1051 pKa = 11.84VNKK1054 pKa = 8.24ITADD1058 pKa = 3.03GKK1060 pKa = 10.68YY1061 pKa = 10.19IIDD1064 pKa = 3.54RR1065 pKa = 11.84LDD1067 pKa = 3.55YY1068 pKa = 10.73TEE1070 pKa = 4.69SGYY1073 pKa = 8.57TALDD1077 pKa = 3.2VDD1079 pKa = 4.52RR1080 pKa = 11.84LYY1082 pKa = 11.55SSLFGKK1088 pKa = 10.28QGDD1091 pKa = 4.18GLSTEE1096 pKa = 4.43QKK1098 pKa = 10.11WMDD1101 pKa = 2.94ISKK1104 pKa = 10.91GVDD1107 pKa = 2.97AKK1109 pKa = 10.74IISADD1114 pKa = 3.47MVSEE1118 pKa = 4.26EE1119 pKa = 4.38FLSSKK1124 pKa = 9.54YY1125 pKa = 8.25TGQMIDD1131 pKa = 3.87EE1132 pKa = 5.93LINSPPQFNYY1142 pKa = 10.36SLVYY1146 pKa = 10.52RR1147 pKa = 11.84NCQDD1151 pKa = 2.99FALDD1155 pKa = 3.65VLRR1158 pKa = 11.84VAQGFSPSNKK1168 pKa = 8.11WDD1170 pKa = 3.19VSTAARR1176 pKa = 11.84MQQRR1180 pKa = 11.84RR1181 pKa = 11.84VISLMDD1187 pKa = 4.15DD1188 pKa = 3.4LMGEE1192 pKa = 4.29SEE1194 pKa = 4.19TFARR1198 pKa = 11.84SGRR1201 pKa = 11.84ASQLLLRR1208 pKa = 11.84QVRR1211 pKa = 11.84EE1212 pKa = 4.25SYY1214 pKa = 10.64VKK1216 pKa = 10.06ARR1218 pKa = 11.84KK1219 pKa = 9.85RR1220 pKa = 11.84GDD1222 pKa = 3.41LQAVKK1227 pKa = 10.48ALQLRR1232 pKa = 11.84FKK1234 pKa = 11.33GFFF1237 pKa = 3.29

Molecular weight:
140.11 kDa
Isoelectric point according different methods:






Protein with the highest isoelectric point:
>sp|Q91ID7|NS1_LDCPR Non-structural protein 1 OS=Lymantria dispar cypovirus 1 (isolate Rao) OX=648169 GN=S5 PE=4 SV=1
MM1 pKa = 7.39FAIDD5 pKa = 4.05PLKK8 pKa = 10.53HH9 pKa = 5.65SKK11 pKa = 10.57LYY13 pKa = 10.59EE14 pKa = 4.03EE15 pKa = 4.63YY16 pKa = 10.94GLYY19 pKa = 10.45LRR21 pKa = 11.84PHH23 pKa = 6.9QINQEE28 pKa = 3.99IKK30 pKa = 8.54PTTIKK35 pKa = 10.54KK36 pKa = 10.23KK37 pKa = 10.17EE38 pKa = 3.85LAPTIRR44 pKa = 11.84SIRR47 pKa = 11.84YY48 pKa = 8.68ASLLHH53 pKa = 7.24SMLAKK58 pKa = 10.14HH59 pKa = 6.53AARR62 pKa = 11.84HH63 pKa = 5.68NGTLINPRR71 pKa = 11.84MYY73 pKa = 11.37ADD75 pKa = 5.11MITLGNTKK83 pKa = 8.74VTVTKK88 pKa = 8.63GTPKK92 pKa = 10.7AQIDD96 pKa = 3.92TLKK99 pKa = 10.59MNGLTVVSKK108 pKa = 10.56SRR110 pKa = 11.84RR111 pKa = 11.84NNKK114 pKa = 9.1KK115 pKa = 10.34KK116 pKa = 10.17PVSDD120 pKa = 3.6TTATTDD126 pKa = 3.13EE127 pKa = 4.27NTNDD131 pKa = 2.75IVTYY135 pKa = 10.27KK136 pKa = 10.86ALTEE140 pKa = 3.87MSTLVEE146 pKa = 4.44SFHH149 pKa = 6.77LPSGLTLIVFDD160 pKa = 4.26DD161 pKa = 4.14EE162 pKa = 5.54KK163 pKa = 10.49YY164 pKa = 10.26QSLIPDD170 pKa = 4.67YY171 pKa = 10.49INQLITYY178 pKa = 6.7TQPHH182 pKa = 7.76IIPTWQGIADD192 pKa = 4.33FSDD195 pKa = 4.24PYY197 pKa = 10.45LRR199 pKa = 11.84SYY201 pKa = 10.55FRR203 pKa = 11.84RR204 pKa = 11.84PFEE207 pKa = 3.98LTASNLASPQKK218 pKa = 10.69HH219 pKa = 5.52NLSPLTRR226 pKa = 11.84SIFNNTGRR234 pKa = 11.84EE235 pKa = 3.67DD236 pKa = 4.54AIIKK240 pKa = 9.84KK241 pKa = 10.17LYY243 pKa = 10.62GYY245 pKa = 10.49GEE247 pKa = 4.57YY248 pKa = 10.27IFIKK252 pKa = 10.95YY253 pKa = 8.52EE254 pKa = 3.93GCLITWTGVYY264 pKa = 10.03GAVAMMVNLPKK275 pKa = 9.92RR276 pKa = 11.84DD277 pKa = 3.76LGLDD281 pKa = 3.29AGDD284 pKa = 4.3NFLKK288 pKa = 10.35EE289 pKa = 4.2YY290 pKa = 10.32KK291 pKa = 9.94QLLFYY296 pKa = 10.92GVITDD301 pKa = 4.31ATPSGISAKK310 pKa = 9.49STVIKK315 pKa = 10.61ISPHH319 pKa = 7.29KK320 pKa = 10.05MMNPSGGALAVLSKK334 pKa = 10.58FLEE337 pKa = 4.46AVVSANVINATLVVYY352 pKa = 10.51AEE354 pKa = 4.34KK355 pKa = 10.85GAGKK359 pKa = 8.68TSFLSTYY366 pKa = 10.83AEE368 pKa = 4.07RR369 pKa = 11.84LSVASGQAVGHH380 pKa = 6.87LSSDD384 pKa = 3.19AYY386 pKa = 10.65GRR388 pKa = 11.84WLAKK392 pKa = 10.62NKK394 pKa = 9.73DD395 pKa = 3.49VKK397 pKa = 10.78EE398 pKa = 3.97PSFEE402 pKa = 3.88YY403 pKa = 10.43DD404 pKa = 3.37YY405 pKa = 11.71VLSRR409 pKa = 11.84DD410 pKa = 3.47TDD412 pKa = 3.7DD413 pKa = 3.54TEE415 pKa = 4.58SYY417 pKa = 9.97YY418 pKa = 9.3EE419 pKa = 3.89QRR421 pKa = 11.84ASEE424 pKa = 4.55LLTLHH429 pKa = 7.08GISEE433 pKa = 4.5LAQYY437 pKa = 10.37EE438 pKa = 4.3LLSVRR443 pKa = 11.84KK444 pKa = 8.78KK445 pKa = 9.85VKK447 pKa = 9.58MMNEE451 pKa = 3.71MNEE454 pKa = 3.77ILIAQLEE461 pKa = 4.32NADD464 pKa = 3.67THH466 pKa = 6.13SEE468 pKa = 4.04RR469 pKa = 11.84NFYY472 pKa = 11.58YY473 pKa = 9.99MVSTGKK479 pKa = 8.32NTPRR483 pKa = 11.84TLIVEE488 pKa = 4.11GHH490 pKa = 6.37FNAQDD495 pKa = 3.26ATIARR500 pKa = 11.84TDD502 pKa = 3.41TTVLLRR508 pKa = 11.84TINDD512 pKa = 3.35TTQAMRR518 pKa = 11.84DD519 pKa = 3.56RR520 pKa = 11.84QRR522 pKa = 11.84SGVVQLFLRR531 pKa = 11.84DD532 pKa = 3.14TYY534 pKa = 11.62YY535 pKa = 11.33RR536 pKa = 11.84LLPSLHH542 pKa = 4.97TTVYY546 pKa = 8.82PFEE549 pKa = 4.09MLEE552 pKa = 4.54SIKK555 pKa = 10.15RR556 pKa = 11.84WKK558 pKa = 8.44WVHH561 pKa = 5.43

Molecular weight:
63.52 kDa
Isoelectric point according different methods:






Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

10

0

10

7701

248

1333

770.1

86.81

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

7.324 ± 0.478

0.727 ± 0.184

5.752 ± 0.252

5.61 ± 0.305

4.012 ± 0.249

4.869 ± 0.274

2.558 ± 0.195

6.739 ± 0.383

4.441 ± 0.575

8.752 ± 0.372

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.701 ± 0.172

5.506 ± 0.275

4.207 ± 0.3

3.818 ± 0.224

5.843 ± 0.316

7.869 ± 0.26

7.596 ± 0.415

6.584 ± 0.244

0.766 ± 0.077

4.324 ± 0.307

Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski