Sporolactobacillus inulinus

Taxonomy: cellular organisms; Bacteria; Terrabacteria group; Firmicutes; Bacilli; Bacillales; Sporolactobacillaceae; Sporolactobacillus

Average proteome isoelectric point is 7.21

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 4718 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A4Y1ZG93|A0A4Y1ZG93_9BACL Putative transcriptional regulator OS=Sporolactobacillus inulinus OX=2078 GN=NBRC111894_3535 PE=4 SV=1
MM1 pKa = 7.4NKK3 pKa = 9.33QVLYY7 pKa = 10.98YY8 pKa = 10.85NIDD11 pKa = 3.54DD12 pKa = 3.86SLDD15 pKa = 3.51YY16 pKa = 10.77EE17 pKa = 4.27RR18 pKa = 11.84QLLTEE23 pKa = 4.26WKK25 pKa = 10.36INDD28 pKa = 3.77LEE30 pKa = 4.63LIEE33 pKa = 4.38VKK35 pKa = 10.44DD36 pKa = 3.78YY37 pKa = 11.34EE38 pKa = 4.35NRR40 pKa = 11.84NSFVDD45 pKa = 3.69YY46 pKa = 10.95AQDD49 pKa = 3.28ADD51 pKa = 4.08GVVVEE56 pKa = 4.4YY57 pKa = 10.47QQITEE62 pKa = 5.16DD63 pKa = 4.16ILNQLPII70 pKa = 4.79

Molecular weight: 8.4 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A4Y1ZDR2|A0A4Y1ZDR2_9BACL Seryl-tRNA synthetase OS=Sporolactobacillus inulinus OX=2078 GN=NBRC111894_2806 PE=4 SV=1
MM1 pKa = 7.25YY2 pKa = 9.4PLKK5 pKa = 10.32RR6 pKa = 11.84TFQPNNRR13 pKa = 11.84KK14 pKa = 9.23RR15 pKa = 11.84KK16 pKa = 8.22KK17 pKa = 8.69VHH19 pKa = 5.45GFRR22 pKa = 11.84ARR24 pKa = 11.84MATANGRR31 pKa = 11.84KK32 pKa = 9.03VLAARR37 pKa = 11.84RR38 pKa = 11.84RR39 pKa = 11.84KK40 pKa = 8.81GRR42 pKa = 11.84KK43 pKa = 8.75VLSAA47 pKa = 4.05

Molecular weight: 5.52 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

4718

0

4718

848944

37

1229

179.9

20.16

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

8.076 ± 0.042

1.051 ± 0.016

5.144 ± 0.036

5.954 ± 0.043

4.43 ± 0.033

6.719 ± 0.039

2.451 ± 0.021

7.056 ± 0.042

6.392 ± 0.046

10.068 ± 0.052

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.961 ± 0.021

3.977 ± 0.03

3.823 ± 0.023

4.081 ± 0.029

5.231 ± 0.035

6.288 ± 0.032

5.307 ± 0.024

6.752 ± 0.029

1.028 ± 0.015

3.212 ± 0.024
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski