Felis domesticus papillomavirus type 1

Taxonomy: Viruses; Monodnaviria; Shotokuvirae; Cossaviricota; Papovaviricetes; Zurhausenvirales; Papillomaviridae; Firstpapillomavirinae; Lambdapapillomavirus; Lambdapapillomavirus 1

Average proteome isoelectric point is 6.33

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 7 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|Q77DW1|Q77DW1_9PAPI Protein E6 OS=Felis domesticus papillomavirus type 1 OX=188524 GN=E6 PE=3 SV=1
MM1 pKa = 7.65IGQAPTISDD10 pKa = 3.15IVLTEE15 pKa = 4.0QPPEE19 pKa = 4.2TVDD22 pKa = 3.44LRR24 pKa = 11.84CYY26 pKa = 9.66EE27 pKa = 3.96QMPGEE32 pKa = 4.14EE33 pKa = 4.63EE34 pKa = 4.12EE35 pKa = 4.73VEE37 pKa = 4.26SQARR41 pKa = 11.84DD42 pKa = 3.59LYY44 pKa = 10.79RR45 pKa = 11.84VSSDD49 pKa = 3.82CGLCGSGVRR58 pKa = 11.84FACLAGGEE66 pKa = 4.74DD67 pKa = 3.66ISHH70 pKa = 6.64LRR72 pKa = 11.84SLLTRR77 pKa = 11.84VQVVCVTCVKK87 pKa = 9.67EE88 pKa = 3.89QKK90 pKa = 10.18LNHH93 pKa = 6.41GGG95 pKa = 3.35

Molecular weight: 10.35 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|Q77DV9|Q77DV9_9PAPI Replication protein E1 OS=Felis domesticus papillomavirus type 1 OX=188524 GN=E1 PE=3 SV=1
MM1 pKa = 7.47EE2 pKa = 5.92NISKK6 pKa = 10.56ALDD9 pKa = 4.03SIQEE13 pKa = 4.04QLLTLYY19 pKa = 10.31EE20 pKa = 4.58KK21 pKa = 10.85DD22 pKa = 3.71SADD25 pKa = 3.31LTDD28 pKa = 5.58QIEE31 pKa = 4.24HH32 pKa = 4.94WHH34 pKa = 5.86LNRR37 pKa = 11.84RR38 pKa = 11.84EE39 pKa = 3.89QTLYY43 pKa = 10.62HH44 pKa = 5.48YY45 pKa = 10.8ARR47 pKa = 11.84RR48 pKa = 11.84QGWMRR53 pKa = 11.84IGMNPVPSLAASQSKK68 pKa = 10.18AKK70 pKa = 10.43SAIEE74 pKa = 4.03QEE76 pKa = 4.5LLLQSMQKK84 pKa = 10.12SAFARR89 pKa = 11.84EE90 pKa = 4.09PWTLSDD96 pKa = 3.42TSRR99 pKa = 11.84EE100 pKa = 3.95RR101 pKa = 11.84LLTEE105 pKa = 3.87PAYY108 pKa = 10.51CFKK111 pKa = 10.95KK112 pKa = 10.34GGRR115 pKa = 11.84QVEE118 pKa = 4.0VRR120 pKa = 11.84YY121 pKa = 10.95DD122 pKa = 3.45NDD124 pKa = 3.49RR125 pKa = 11.84DD126 pKa = 3.63NTSRR130 pKa = 11.84HH131 pKa = 4.93VLWDD135 pKa = 4.46FIYY138 pKa = 10.1FQGDD142 pKa = 2.75NDD144 pKa = 3.89EE145 pKa = 4.12WHH147 pKa = 6.28KK148 pKa = 9.96TPGRR152 pKa = 11.84LDD154 pKa = 3.41ARR156 pKa = 11.84GLYY159 pKa = 10.64YY160 pKa = 9.73MDD162 pKa = 4.45GKK164 pKa = 11.14VKK166 pKa = 9.7TYY168 pKa = 10.5YY169 pKa = 10.82VDD171 pKa = 4.57FEE173 pKa = 4.56EE174 pKa = 4.52EE175 pKa = 3.68AKK177 pKa = 10.67KK178 pKa = 10.64YY179 pKa = 10.68GKK181 pKa = 8.66TGTYY185 pKa = 10.01EE186 pKa = 3.97ILNKK190 pKa = 9.37LTTPVPTSTSSPTGPRR206 pKa = 11.84DD207 pKa = 3.7SPGSGSAASTGVTPKK222 pKa = 10.38KK223 pKa = 8.96QTPGKK228 pKa = 10.0RR229 pKa = 11.84RR230 pKa = 11.84GPLRR234 pKa = 11.84FTSPKK239 pKa = 9.69GPRR242 pKa = 11.84PGGFRR247 pKa = 11.84RR248 pKa = 11.84GRR250 pKa = 11.84GRR252 pKa = 11.84GQGEE256 pKa = 4.46LPAPAPGTITPPSAEE271 pKa = 4.14EE272 pKa = 3.7VGKK275 pKa = 10.66ASEE278 pKa = 4.24TVPRR282 pKa = 11.84GSTTRR287 pKa = 11.84LGRR290 pKa = 11.84LLLDD294 pKa = 3.93ARR296 pKa = 11.84DD297 pKa = 3.86PPLLVLKK304 pKa = 10.58GDD306 pKa = 4.13PNSLKK311 pKa = 10.38CVRR314 pKa = 11.84YY315 pKa = 9.16RR316 pKa = 11.84LKK318 pKa = 10.9GKK320 pKa = 10.35YY321 pKa = 9.63SSLFCWVSTTWSWTASTGTARR342 pKa = 11.84WGGARR347 pKa = 11.84MILTFKK353 pKa = 10.65DD354 pKa = 3.39LEE356 pKa = 4.07QRR358 pKa = 11.84EE359 pKa = 4.54VFVKK363 pKa = 9.37TVKK366 pKa = 10.34LPKK369 pKa = 9.82SVQFFRR375 pKa = 11.84GSFDD379 pKa = 4.19DD380 pKa = 3.99YY381 pKa = 12.03

Molecular weight: 43.0 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

7

0

7

2370

95

607

338.6

37.9

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.624 ± 0.775

2.321 ± 0.823

6.16 ± 0.522

6.329 ± 0.407

4.43 ± 0.54

6.793 ± 0.687

1.392 ± 0.27

3.713 ± 0.601

5.359 ± 0.841

9.367 ± 0.64

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.603 ± 0.289

2.869 ± 0.801

6.92 ± 1.293

5.148 ± 0.295

6.624 ± 0.833

7.215 ± 0.785

6.582 ± 0.81

6.16 ± 0.808

1.35 ± 0.403

3.038 ± 0.374
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski