Aruac virus

Taxonomy: Viruses; Riboviria; Orthornavirae; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Rhabdoviridae; Alpharhabdovirinae; Arurhavirus; Aruac arurhavirus

Average proteome isoelectric point is 6.33

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 7 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A0D3R1D3|A0A0D3R1D3_9RHAB Nucleocapsid protein OS=Aruac virus OX=1272961 PE=4 SV=1
MM1 pKa = 7.83PNYY4 pKa = 9.84FSPPVQQPHH13 pKa = 6.94TINLPFSLEE22 pKa = 3.85VHH24 pKa = 7.06IIACGDD30 pKa = 3.2NMMTLSLEE38 pKa = 3.91PHH40 pKa = 5.51QNEE43 pKa = 4.52INLSSYY49 pKa = 10.27EE50 pKa = 4.1KK51 pKa = 10.94NN52 pKa = 3.32

Molecular weight: 5.94 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A0D3R1I2|A0A0D3R1I2_9RHAB Uncharacterized protein OS=Aruac virus OX=1272961 PE=4 SV=1
MM1 pKa = 7.51HH2 pKa = 6.83NQTRR6 pKa = 11.84AVVSFPNLPNVGAFADD22 pKa = 4.27SIKK25 pKa = 10.04NTLEE29 pKa = 3.88EE30 pKa = 3.63TWIRR34 pKa = 11.84FVQKK38 pKa = 10.21IEE40 pKa = 4.05SWSDD44 pKa = 3.24TVKK47 pKa = 9.29QTLIVVFIIICIFIAIKK64 pKa = 10.32ILIVCGQLCTTICQGTTHH82 pKa = 7.31GLNCIRR88 pKa = 11.84SCSRR92 pKa = 11.84RR93 pKa = 11.84RR94 pKa = 11.84ILRR97 pKa = 11.84PSPPPKK103 pKa = 9.51PKK105 pKa = 9.83RR106 pKa = 11.84RR107 pKa = 11.84KK108 pKa = 7.71QTSAPDD114 pKa = 3.17RR115 pKa = 11.84YY116 pKa = 10.01YY117 pKa = 11.05GYY119 pKa = 11.28AVTQVV124 pKa = 2.83

Molecular weight: 14.08 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

7

0

7

3854

52

2100

550.6

62.6

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

4.359 ± 0.922

1.687 ± 0.292

5.397 ± 0.421

6.098 ± 0.5

3.866 ± 0.204

5.942 ± 0.452

2.128 ± 0.411

8.199 ± 0.868

6.565 ± 0.178

9.549 ± 1.272

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.673 ± 0.432

4.774 ± 0.459

5.138 ± 0.859

3.477 ± 0.217

4.956 ± 0.38

8.459 ± 0.706

5.942 ± 0.402

5.189 ± 0.811

1.92 ± 0.238

3.684 ± 0.372
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski