Cercospora zeina

Taxonomy: cellular organisms; Eukaryota; Opisthokonta; Fungi; Dikarya; Ascomycota; saccharomyceta; Pezizomycotina; leotiomyceta; dothideomyceta; Dothideomycetes; Dothideomycetidae; Mycosphaerellales; Mycosphaerellaceae; Cercospora

Average proteome isoelectric point is 6.56

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 10192 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A2I0S9N7|A0A2I0S9N7_9PEZI Putative oxidoreductase YkvO OS=Cercospora zeina OX=348901 GN=BST61_czeina2g001900 PE=4 SV=1
MM1 pKa = 7.28FLSTAATAIALLASTVAAIPASLTSMAEE29 pKa = 4.03NPNLEE34 pKa = 3.89ITEE37 pKa = 4.13LVINSTANGNTMLQFNVQNPEE58 pKa = 3.66PLAANGIAEE67 pKa = 5.14CRR69 pKa = 11.84GEE71 pKa = 4.04WDD73 pKa = 3.34TTKK76 pKa = 10.61QDD78 pKa = 3.14WPISGEE84 pKa = 4.58ALTCDD89 pKa = 3.97NSTSMTWYY97 pKa = 9.2IDD99 pKa = 3.0SWTSAMNFVINIQDD113 pKa = 3.57RR114 pKa = 11.84FDD116 pKa = 4.33DD117 pKa = 4.39PSVGKK122 pKa = 9.38PPYY125 pKa = 10.9DD126 pKa = 3.89RR127 pKa = 11.84MTTFSKK133 pKa = 10.95AIINEE138 pKa = 4.37TVVSYY143 pKa = 11.35ASDD146 pKa = 3.58TPAGNTNAGTDD157 pKa = 3.94APPEE161 pKa = 4.63SISGSQLPDD170 pKa = 2.83ITIYY174 pKa = 10.9AVVYY178 pKa = 10.24AVSAA182 pKa = 3.86

Molecular weight: 19.38 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A2I0RS63|A0A2I0RS63_9PEZI DNA replication checkpoint protein tel2 OS=Cercospora zeina OX=348901 GN=BST61_czeina50g000040 PE=3 SV=1
MM1 pKa = 6.82VTGQRR6 pKa = 11.84ACVRR10 pKa = 11.84RR11 pKa = 11.84VRR13 pKa = 11.84RR14 pKa = 11.84MWCRR18 pKa = 11.84RR19 pKa = 11.84KK20 pKa = 9.77AVGWTKK26 pKa = 9.36HH27 pKa = 5.17TICRR31 pKa = 11.84HH32 pKa = 6.03DD33 pKa = 3.85AFQYY37 pKa = 7.49ATPDD41 pKa = 3.45MQRR44 pKa = 11.84VKK46 pKa = 10.76YY47 pKa = 10.0HH48 pKa = 5.95VEE50 pKa = 3.42ASLRR54 pKa = 11.84SINVEE59 pKa = 4.15VQQHH63 pKa = 4.21VAKK66 pKa = 10.7SRR68 pKa = 11.84IAGAGASNVSFAGGSPTCCCWISDD92 pKa = 3.83AVGLKK97 pKa = 10.33NIWPWQSSRR106 pKa = 11.84GQWRR110 pKa = 11.84TLVIMRR116 pKa = 11.84TGGSNRR122 pKa = 11.84SPEE125 pKa = 4.15AASHH129 pKa = 6.73CDD131 pKa = 3.29ATFHH135 pKa = 6.15GQQ137 pKa = 2.94

Molecular weight: 15.36 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

10192

0

10192

5190240

58

8800

509.2

56.23

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

9.358 ± 0.02

1.221 ± 0.009

5.744 ± 0.018

6.192 ± 0.024

3.507 ± 0.014

6.912 ± 0.022

2.544 ± 0.011

4.545 ± 0.015

4.812 ± 0.023

8.547 ± 0.025

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.184 ± 0.009

3.6 ± 0.012

6.03 ± 0.025

4.306 ± 0.018

6.33 ± 0.021

8.007 ± 0.026

6.053 ± 0.02

6.001 ± 0.015

1.428 ± 0.009

2.675 ± 0.012
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski