Citricoccus muralis

Taxonomy: cellular organisms; Bacteria; Terrabacteria group; Actinobacteria; Actinomycetia; Micrococcales; Micrococcaceae; Citricoccus

Average proteome isoelectric point is 5.86

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 3030 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A3D9LDI5|A0A3D9LDI5_9MICC Serine transporter OS=Citricoccus muralis OX=169134 GN=C8E99_2325 PE=4 SV=1
MM1 pKa = 7.84SDD3 pKa = 3.37YY4 pKa = 10.85EE5 pKa = 4.68IYY7 pKa = 10.89VEE9 pKa = 4.06NCQGVIDD16 pKa = 4.15AAYY19 pKa = 8.8GTMADD24 pKa = 3.33KK25 pKa = 10.25TVNFSLMATEE35 pKa = 4.03ATEE38 pKa = 3.84AATALKK44 pKa = 10.25PSFVVDD50 pKa = 3.53SRR52 pKa = 11.84GTHH55 pKa = 6.62LDD57 pKa = 2.94FGTYY61 pKa = 10.09LDD63 pKa = 4.46SFQAFYY69 pKa = 11.56DD70 pKa = 3.73NLLKK74 pKa = 10.78PEE76 pKa = 4.35FDD78 pKa = 4.5DD79 pKa = 3.74VCSDD83 pKa = 3.25IEE85 pKa = 4.15LVIGAFQTALNSYY98 pKa = 8.02TAGDD102 pKa = 4.19GEE104 pKa = 4.56MLAQAKK110 pKa = 9.94ARR112 pKa = 11.84EE113 pKa = 4.38DD114 pKa = 3.76GVSEE118 pKa = 3.94VGYY121 pKa = 7.94PTVIAKK127 pKa = 10.38DD128 pKa = 3.55GSTLHH133 pKa = 6.65EE134 pKa = 5.1GGTAVRR140 pKa = 11.84EE141 pKa = 4.17DD142 pKa = 3.63VNGDD146 pKa = 3.74GVVDD150 pKa = 4.38GQDD153 pKa = 2.7TGTPQGEE160 pKa = 4.14PGGLGVFEE168 pKa = 4.49NQEE171 pKa = 4.1QYY173 pKa = 11.01QEE175 pKa = 3.95ASEE178 pKa = 4.09

Molecular weight: 18.97 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A3D9L987|A0A3D9L987_9MICC NitT/TauT family transport system substrate-binding protein OS=Citricoccus muralis OX=169134 GN=C8E99_0719 PE=4 SV=1
MM1 pKa = 7.6KK2 pKa = 10.25VRR4 pKa = 11.84NSVRR8 pKa = 11.84ALKK11 pKa = 9.9KK12 pKa = 10.01VPGAQVVRR20 pKa = 11.84RR21 pKa = 11.84RR22 pKa = 11.84GRR24 pKa = 11.84TFVINKK30 pKa = 9.03KK31 pKa = 8.56NPRR34 pKa = 11.84MKK36 pKa = 10.47ARR38 pKa = 11.84QGG40 pKa = 3.24

Molecular weight: 4.63 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

3030

0

3030

1053604

29

2148

347.7

37.18

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

12.763 ± 0.06

0.551 ± 0.01

5.989 ± 0.034

6.13 ± 0.043

2.918 ± 0.026

9.426 ± 0.035

2.211 ± 0.022

3.894 ± 0.033

2.011 ± 0.031

10.028 ± 0.054

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.068 ± 0.018

2.111 ± 0.022

5.691 ± 0.033

3.29 ± 0.023

6.872 ± 0.043

5.803 ± 0.032

6.351 ± 0.035

8.488 ± 0.036

1.471 ± 0.021

1.935 ± 0.02
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski