Gyrovirus Tu243

Taxonomy: Viruses; Anelloviridae; Gyrovirus; Gyrovirus homsa4

Average proteome isoelectric point is 7.35

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 3 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|U5UAI8|U5UAI8_9VIRU CA1 OS=Gyrovirus Tu243 OX=1415627 PE=3 SV=1
MM1 pKa = 7.48LADD4 pKa = 4.74EE5 pKa = 5.29LPGDD9 pKa = 4.08AQASVQLRR17 pKa = 11.84QFQEE21 pKa = 3.83PLVPVGGEE29 pKa = 3.9ACVGSCYY36 pKa = 10.42GHH38 pKa = 6.34SDD40 pKa = 3.53RR41 pKa = 11.84PISSEE46 pKa = 3.88TSVWWFRR53 pKa = 11.84HH54 pKa = 4.92CRR56 pKa = 11.84DD57 pKa = 2.69WSEE60 pKa = 3.26ARR62 pKa = 11.84RR63 pKa = 11.84RR64 pKa = 11.84KK65 pKa = 9.92EE66 pKa = 3.17ILEE69 pKa = 3.92FFKK72 pKa = 10.78VQKK75 pKa = 10.21RR76 pKa = 11.84RR77 pKa = 11.84LPGVGGGLQEE87 pKa = 4.21EE88 pKa = 4.87LL89 pKa = 4.07

Molecular weight: 10.12 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|U5UAI8|U5UAI8_9VIRU CA1 OS=Gyrovirus Tu243 OX=1415627 PE=3 SV=1
MM1 pKa = 6.57VRR3 pKa = 11.84YY4 pKa = 9.5RR5 pKa = 11.84RR6 pKa = 11.84RR7 pKa = 11.84RR8 pKa = 11.84PWGRR12 pKa = 11.84LYY14 pKa = 10.86KK15 pKa = 9.68WFRR18 pKa = 11.84GGWHH22 pKa = 5.56YY23 pKa = 11.06KK24 pKa = 9.81RR25 pKa = 11.84RR26 pKa = 11.84PKK28 pKa = 10.33GRR30 pKa = 11.84WYY32 pKa = 10.06RR33 pKa = 11.84SSWGRR38 pKa = 11.84KK39 pKa = 6.44RR40 pKa = 11.84RR41 pKa = 11.84YY42 pKa = 6.9HH43 pKa = 4.8HH44 pKa = 7.11RR45 pKa = 11.84YY46 pKa = 9.14RR47 pKa = 11.84RR48 pKa = 11.84GLFGRR53 pKa = 11.84NFKK56 pKa = 10.66RR57 pKa = 11.84SFYY60 pKa = 8.59VQHH63 pKa = 6.88PGSYY67 pKa = 7.84TVRR70 pKa = 11.84RR71 pKa = 11.84TNPYY75 pKa = 7.3NTQRR79 pKa = 11.84LRR81 pKa = 11.84FQGLILVNNAVTQTGTSSVSNMRR104 pKa = 11.84ATAIEE109 pKa = 3.72ISLRR113 pKa = 11.84GLLLAYY119 pKa = 9.79FMNHH123 pKa = 4.75STGGPGWAGDD133 pKa = 3.72SGTKK137 pKa = 10.02VAISPLEE144 pKa = 3.79WWRR147 pKa = 11.84WAYY150 pKa = 9.93IRR152 pKa = 11.84IEE154 pKa = 4.1PCNDD158 pKa = 2.2GRR160 pKa = 11.84VFGMAVPHH168 pKa = 7.52DD169 pKa = 3.9EE170 pKa = 4.53VLYY173 pKa = 11.11NWFCQWQLFKK183 pKa = 10.76HH184 pKa = 5.74VKK186 pKa = 8.69TDD188 pKa = 3.62LRR190 pKa = 11.84VLNTDD195 pKa = 2.66VRR197 pKa = 11.84TSAEE201 pKa = 3.74ARR203 pKa = 11.84IVASLLVQDD212 pKa = 5.43SYY214 pKa = 10.96WQVGNRR220 pKa = 11.84GATQLSQIKK229 pKa = 9.78FPSFLEE235 pKa = 4.05LSAWGAQWSFQPGLQSVSSRR255 pKa = 11.84SFNHH259 pKa = 6.18HH260 pKa = 6.2SFVGTNDD267 pKa = 3.25PMGEE271 pKa = 3.97PWKK274 pKa = 10.7VFCPLDD280 pKa = 4.05NMTQQDD286 pKa = 3.98TQISWVYY293 pKa = 9.29ATLFLAEE300 pKa = 4.45FASVTNKK307 pKa = 9.93QGYY310 pKa = 7.24NTEE313 pKa = 4.13QTSLEE318 pKa = 4.08MQALSDD324 pKa = 3.34TWAVIKK330 pKa = 10.69VRR332 pKa = 11.84SEE334 pKa = 3.46WMLGNQNRR342 pKa = 11.84VKK344 pKa = 11.02SNMVTFTTGEE354 pKa = 4.08PPP356 pKa = 3.24

Molecular weight: 41.61 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

3

0

3

676

89

356

225.3

25.59

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

5.325 ± 0.093

1.775 ± 0.738

3.698 ± 0.645

5.621 ± 1.87

4.734 ± 0.233

9.911 ± 1.728

1.923 ± 0.49

3.254 ± 0.514

4.734 ± 1.009

7.544 ± 0.433

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.923 ± 0.454

3.994 ± 1.363

4.438 ± 0.357

5.178 ± 0.654

8.58 ± 1.159

8.136 ± 0.082

5.917 ± 1.439

6.657 ± 0.519

3.698 ± 0.995

2.959 ± 0.957
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski